Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0027203

Physical Location & Seq

Genomic Coordinates Forward (+)

1206760 .. 1207939

Gene Structure 1180 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G04445.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 519 bp

ATGCCATTTTCAGAACCCCAAGAATGTGCGGTTTGTAAGAGAGTCTTCTTATCATCACACCAGCTGATCTCACACTACAACGCCGCTCACTCCAATCGCCAGTATTCCACCTTCTCTTCCTCCCCCGCCGCCGCCGCCGCTGCTGCACCCACCACCTTCCGCCACTACACTAACGTAAACGGCCGGAACCCTAATCCTGATTTTCAGGCGAGGAATCAGTTTGACGTGAATTATTACCGTAGAGGTTACTTAGATGATCAAGGGAGGTTCCATAAAGGATCTCCTCATGCGCCGGCGATGAGTCCGACCAGAAAATATAAGTTTTTGCTGCCAAAGATGCCGCCGACGACGATGCCGGAGACTCCGAAACTGATGGATCTTTTTCCGGAGACGTCATCGGGAGGTACCCGTACGCTGCCGCTTCTTTGCCAGCTGGACCAATGGAGACCGGAGGATAGCGCTGTGGCGGAGAACGGAGGAGCCAACTCCAGTCCCATCGACTTGTCATTAAGGCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006897 GO:0008150 GO:0008152 GO:0008360 GO:0009987 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022603 GO:0022604 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051179 GO:0051234 GO:0065007 GO:0065008 GO:0071704 GO:0098657 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04068 ko04310 ko04340 ko04341 ko04390 ko04391 ko04392 ko04710 ko04711 map04068 map04310 map04340 map04341 map04390 map04391 map04392 map04710 map04711

Pfam Domains

Protein Families

Pkinase

Protein Analysis

172

Amino Acids

19.2

Weight (kDa)

9.07

Isoelectric Point (pI)

71.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0027203)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04445 AT1G04445

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	395
Acc65I	GGTACC	1 cut(s)	404
AccB1I	GGYRCC	1 cut(s)	404
AccBSI	CCGCTC	1 cut(s)	86
AccIII	TCCGGA	1 cut(s)	385
AclWI	GGATC	2 cut(s)	286, 384
AcoI	YGGCCR	1 cut(s)	181
AcyI	GRCGYC	1 cut(s)	392
AfaI	GTAC	2 cut(s)	406, 412
AfeI	AGCGCT	1 cut(s)	460
AjiI	CACGTC	1 cut(s)	226
AluBI	AGCT	2 cut(s)	64, 433
AluI	AGCT	2 cut(s)	64, 433
Alw26I	GTCTC	3 cut(s)	353, 383, 439
AlwI	GGATC	2 cut(s)	286, 384
Aor13HI	TCCGGA	1 cut(s)	385
Aor51HI	AGCGCT	1 cut(s)	460
AoxI	GGCC	1 cut(s)	181
ApeKI	GCWGC	4 cut(s)	140, 143, 328, 415
Asp718I	GGTACC	1 cut(s)	404
AspLEI	GCGC	2 cut(s)	292, 461
AspS9I	GGNCC	1 cut(s)	436
AvaII	GGWCC	1 cut(s)	436
BanI	GGYRCC	1 cut(s)	404
BarI	GAAGNNNNNNTAC	2 cut(s)	95, 127
BbsI	GAAGAC	1 cut(s)	37
BbvI	GCAGC	4 cut(s)	127, 130, 315, 402
BccI	CCATC	2 cut(s)	367, 503
BceAI	ACGGC	1 cut(s)	196
BcgI	CGANNNNNNTGC	2 cut(s)	334, 368
BclI	TGATCA	1 cut(s)	256
BcoDI	GTCTC	3 cut(s)	353, 383, 439
BfoI	RGCGCY	1 cut(s)	462
Bme18I	GGWCC	1 cut(s)	436
BmgBI	CACGTC	1 cut(s)	226
BmgT120I	GGNCC	1 cut(s)	436
BmiI	GGNNCC	4 cut(s)	188, 269, 406, 481
BmsI	GCATC	2 cut(s)	327, 342
BpiI	GAAGAC	1 cut(s)	37
BpmI	CTGGAG	1 cut(s)	472
BsaHI	GRCGYC	1 cut(s)	392
BsaI	GGTCTC	1 cut(s)	439
BsaWI	WCCGGW	2 cut(s)	385, 448
Bse118I	RCCGGY	1 cut(s)	292
Bse1I	ACTGG	2 cut(s)	100, 489
BseAI	TCCGGA	1 cut(s)	385
BseNI	ACTGG	2 cut(s)	100, 489
BseRI	GAGGAG	2 cut(s)	273, 492
BseX3I	CGGCCG	1 cut(s)	181
BseXI	GCAGC	4 cut(s)	127, 130, 315, 402
BsgI	GTGCAG	1 cut(s)	129
Bsh1285I	CGRYCG	1 cut(s)	184
BshFI	GGCC	1 cut(s)	183
BshNI	GGYRCC	1 cut(s)	404
BsiEI	CGRYCG	1 cut(s)	184
BsiSI	CCGG	5 cut(s)	184, 293, 356, 386, 449
BsiWI	CGTACG	1 cut(s)	410
BslFI	GGGAC	1 cut(s)	477
BsmAI	GTCTC	3 cut(s)	353, 383, 439
BsmBI	CGTCTC	1 cut(s)	383
BsmFI	GGGAC	1 cut(s)	477
BsnI	GGCC	1 cut(s)	183
Bso31I	GGTCTC	1 cut(s)	439
Bsp13I	TCCGGA	1 cut(s)	385
Bsp143I	GATC	4 cut(s)	66, 256, 278, 376
BspANI	GGCC	1 cut(s)	183
BspEI	TCCGGA	1 cut(s)	385
BspLI	GGNNCC	4 cut(s)	188, 269, 406, 481
BspPI	GGATC	2 cut(s)	286, 384
BspT107I	GGYRCC	1 cut(s)	404
BspTNI	GGTCTC	1 cut(s)	439
BsrBI	CCGCTC	1 cut(s)	86
BsrFI	RCCGGY	1 cut(s)	292
BsrI	ACTGG	2 cut(s)	100, 489
BssAI	RCCGGY	1 cut(s)	292
BssMI	GATC	4 cut(s)	66, 256, 278, 376
BssNI	GRCGYC	1 cut(s)	392
Bst4CI	ACNGT	1 cut(s)	239
Bst6I	CTCTTC	1 cut(s)	121
BstACI	GRCGYC	1 cut(s)	392
BstC8I	GCNNGC	2 cut(s)	294, 431
BstDEI	CTNAG	1 cut(s)	250
BstH2I	RGCGCY	1 cut(s)	462
BstHHI	GCGC	2 cut(s)	292, 461
BstKTI	GATC	4 cut(s)	69, 259, 281, 379
BstMAI	GTCTC	3 cut(s)	353, 383, 439
BstMBI	GATC	4 cut(s)	66, 256, 278, 376
BstMCI	CGRYCG	1 cut(s)	184
BstMWI	GCNNNNNNNGC	5 cut(s)	134, 137, 140, 143, 337
BstV1I	GCAGC	4 cut(s)	127, 130, 315, 402
BstV2I	GAAGAC	1 cut(s)	37
BstX2I	RGATCY	2 cut(s)	278, 376
BstYI	RGATCY	2 cut(s)	278, 376
BstZI	CGGCCG	1 cut(s)	181
BsuRI	GGCC	1 cut(s)	183
BtgZI	GCGATG	1 cut(s)	311
BtrI	CACGTC	1 cut(s)	226
Cac8I	GCNNGC	2 cut(s)	294, 431
CfoI	GCGC	2 cut(s)	292, 461
Cfr10I	RCCGGY	1 cut(s)	292
Cfr13I	GGNCC	1 cut(s)	436
Csp6I	GTAC	2 cut(s)	405, 411
CviAII	CATG	1 cut(s)	287
CviJI	RGCY	5 cut(s)	64, 183, 433, 482, 514
CviKI_1	RGCY	5 cut(s)	64, 183, 433, 482, 514
CviQI	GTAC	2 cut(s)	405, 411
DdeI	CTNAG	1 cut(s)	250
DpnI	GATC	4 cut(s)	68, 258, 280, 378
DpnII	GATC	4 cut(s)	66, 256, 278, 376
EaeI	YGGCCR	1 cut(s)	181
EagI	CGGCCG	1 cut(s)	181
Eam1104I	CTCTTC	1 cut(s)	121
EarI	CTCTTC	1 cut(s)	121
EciI	GGCGGA	2 cut(s)	149, 482
EclXI	CGGCCG	1 cut(s)	181
Eco31I	GGTCTC	1 cut(s)	439
Eco47I	GGWCC	1 cut(s)	436
Eco47III	AGCGCT	1 cut(s)	460
Eco52I	CGGCCG	1 cut(s)	181
Esp3I	CGTCTC	1 cut(s)	383
FaeI	CATG	1 cut(s)	290
FaiI	YATR	3 cut(s)	273, 288, 318
FalI	AAGNNNNNCTT	2 cut(s)	29, 61
FaqI	GGGAC	1 cut(s)	477
FatI	CATG	1 cut(s)	286
FauI	CCCGC	1 cut(s)	133
FbaI	TGATCA	1 cut(s)	256
GlaI	GCGC	2 cut(s)	291, 460
GsuI	CTGGAG	1 cut(s)	472
HaeII	RGCGCY	1 cut(s)	462
HaeIII	GGCC	1 cut(s)	183
HapII	CCGG	5 cut(s)	184, 293, 356, 386, 449
HhaI	GCGC	2 cut(s)	292, 461
Hin1I	GRCGYC	1 cut(s)	392
Hin1II	CATG	1 cut(s)	290
Hin6I	GCGC	2 cut(s)	290, 459
HinP1I	GCGC	2 cut(s)	290, 459
HinfI	GANTC	4 cut(s)	42, 214, 301, 361
HpaII	CCGG	5 cut(s)	184, 293, 356, 386, 449
Hpy166II	GTNNAC	1 cut(s)	178
Hpy188I	TCNGA	3 cut(s)	13, 306, 366
Hpy188III	TCNNGA	3 cut(s)	197, 386, 399
Hpy8I	GTNNAC	1 cut(s)	178
Hpy99I	CGWCG	2 cut(s)	349, 352
HpyAV	CCTTC	2 cut(s)	121, 166
HpyCH4III	ACNGT	1 cut(s)	239
HpyCH4IV	ACGT	3 cut(s)	174, 225, 392
HpyCH4V	TGCA	1 cut(s)	146
HpyF10VI	GCNNNNNNNGC	5 cut(s)	134, 137, 140, 143, 337
HpyF3I	CTNAG	1 cut(s)	250
HpySE526I	ACGT	3 cut(s)	174, 225, 392
Hsp92I	GRCGYC	1 cut(s)	392
Hsp92II	CATG	1 cut(s)	290
HspAI	GCGC	2 cut(s)	290, 459
Kpn2I	TCCGGA	1 cut(s)	385
KpnI	GGTACC	1 cut(s)	408
KroI	GCCGGC	1 cut(s)	292
KroNI	GCCGGC	1 cut(s)	294
Ksp22I	TGATCA	1 cut(s)	256
Kzo9I	GATC	4 cut(s)	66, 256, 278, 376
LmnI	GCTCC	1 cut(s)	479
Lsp1109I	GCAGC	4 cut(s)	127, 130, 315, 402
LweI	GCATC	2 cut(s)	327, 342
MaeII	ACGT	3 cut(s)	174, 225, 392
MaeIII	GTNAC	1 cut(s)	245
MalI	GATC	4 cut(s)	68, 258, 280, 378
MbiI	CCGCTC	1 cut(s)	86
MboI	GATC	4 cut(s)	66, 256, 278, 376
MboII	GAAGA	2 cut(s)	37, 108
MflI	RGATCY	2 cut(s)	278, 376
MluCI	AATT	1 cut(s)	229
MlyI	GAGTC	3 cut(s)	51, 310, 355
MmeI	TCCRAC	1 cut(s)	329
MnlI	CCTC	8 cut(s)	130, 204, 236, 258, 294, 395, 445, 470
MreI	CGCCGGCG	1 cut(s)	292
MroI	TCCGGA	1 cut(s)	385
MroNI	GCCGGC	1 cut(s)	292
MseI	TTAA	1 cut(s)	509
MspA1I	CMGCKG	3 cut(s)	64, 140, 433
MspI	CCGG	5 cut(s)	184, 293, 356, 386, 449
MwoI	GCNNNNNNNGC	5 cut(s)	134, 137, 140, 143, 337
NaeI	GCCGGC	1 cut(s)	294
NdeII	GATC	4 cut(s)	66, 256, 278, 376
NgoMIV	GCCGGC	1 cut(s)	292
NlaIII	CATG	1 cut(s)	290
NlaIV	GGNNCC	4 cut(s)	188, 269, 406, 481
PdiI	GCCGGC	1 cut(s)	294
PfeI	GAWTC	1 cut(s)	214
Pfl23II	CGTACG	1 cut(s)	410
PleI	GAGTC	3 cut(s)	50, 309, 355
PpsI	GAGTC	3 cut(s)	50, 309, 355
PspLI	CGTACG	1 cut(s)	410
PspN4I	GGNNCC	4 cut(s)	188, 269, 406, 481
PspPI	GGNCC	1 cut(s)	436
PsuI	RGATCY	2 cut(s)	278, 376
PvuII	CAGCTG	2 cut(s)	64, 433
RsaI	GTAC	2 cut(s)	406, 412
RsaNI	GTAC	2 cut(s)	405, 411
SaqAI	TTAA	1 cut(s)	509
Sau3AI	GATC	4 cut(s)	66, 256, 278, 376
Sau96I	GGNCC	1 cut(s)	436
SchI	GAGTC	3 cut(s)	51, 310, 355
SfaNI	GCATC	2 cut(s)	327, 342
SgrAI	CRCCGGYG	1 cut(s)	292
SinI	GGWCC	1 cut(s)	436
Sse9I	AATT	1 cut(s)	229
TaaI	ACNGT	1 cut(s)	239
TaiI	ACGT	3 cut(s)	177, 228, 395
TaqI	TCGA	1 cut(s)	498
TasI	AATT	1 cut(s)	229
TauI	GCSGC	7 cut(s)	86, 131, 134, 137, 140, 343, 421
TfiI	GAWTC	1 cut(s)	214
Tru1I	TTAA	1 cut(s)	509
Tru9I	TTAA	1 cut(s)	509
TseI	GCWGC	4 cut(s)	140, 143, 328, 415
TspGWI	ACGGA	1 cut(s)	489
VpaK11BI	GGWCC	1 cut(s)	436
ZraI	GACGTC	1 cut(s)	393

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.