Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0023954

Physical Location & Seq

Genomic Coordinates Reverse (-)

8378972 .. 8382290

Gene Structure 3319 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G23700.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1422 bp

ATGACGAGTTCACCGGAAACGAGATTTCCTCTGGTTGCGAAAGATTACGAGATTTTAGAAGAGATAGGCGATGGTGTTTACAGAGCTCGATGCATTCTACTTGATGAAATTGTAGCCATCAAGATCTGGAACCTTGAAAAATGCACCAACGATCTGGAAACCATAAGGAAAGAAGTTCATAGATTGAGCTTAATTGATCATCCAAATCTATTGAGGGTGCATTGCTCTTTCATAGATAGTAGCAGCTTGTGGATTGTGATGCCTTTTATGTCGTGCGGCTCTTCCTTGAACATAATGAAATCAGTCTATCCAAATGGTCTTGAGGAACCTGTAATTGCTATATTGTTGCGGGAGATTCTTAAAGCTCTTGTTTACCTTCATGGACTAGGACACATCCATCGAAATGTTAAGGCTGGGAATGTACTGGTTGACTCAGAAGGAACTGTTAAGCTCGGTGACTTTGAAGTTTCAGCATCCATGTTTGATAGTGTGGAAAGGATGCGTACTAGTTCTGAGAATACTTTTGTTGGAAATCCACGCCGGATGGCACCTGAGAAGGATATGCAGCAAGTTGATGGCTATGATTTCAAAGTGGATATCTGGTCGTTTGGCATGACTGCCCTGGAACTTGCCCATGGTCATTCACCTACCACGGTGCTACCATTGAACTTACAAAATTCTCCCTTTCCTAACTATGAAGAAGACACGAAATTCTCTAAGTCTTTTAGAGAGTTGGTCGCAGCTTGCTTGATAGAAGATCCAGAAAAACGTCCGACCGCTTCACAACTACTGGAATATCCGTTCTTACAGCAAACTCTTTCTACTGAATACTTGGCTAGTACATTTCTTGATGGCCTCTCTCCGCTTGGTGAGCGTTATAGAAAGCTGAAGGAGGAAAAGGCCAAGTTGGTTAAAGGTGTAGATGGTAACAAGGAGAAAGTATCTCAGGAAAATGTTGAAGCGCTGCTGATGGAACCTGCTAGTCTTGTGAACCCTGTTTCTTGTGATACTGCTCAAGTCCTCCCAATCTTACAGAATATCCTGATCCAAAATGATATCCAAAGGGAAAATGTTGAAGCGCTGCTGACGGAACCTGCTATTCTTGTGAACCCTGTTTCTTGTGATACTGCTCAAGTCCTCCCAATCGTACAGAATATCCTGATCCAGAATGATATCCAAAGGAAAAGGTTAATCGGTTTAATGCAACTCTGTGATCCAACTGCTGGTAAGTTTGCTGTTCTATCACTAGAATTTGCATCTTCTCTATGTTACAAGTTCCATGACCTGATCTTGATTTTTGTACAGAAATCAGAATTCCGATTGGCAATACAGAAGTTGGGCAGATATCAACAACAGAGACAGATCTATTGTCTGAGGTTCACGTTTTGCAGCAGAGGTAATGATAAATTCCACAAGCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0080090 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

473

Amino Acids

53.58

Weight (kDa)

5.7

Isoelectric Point (pI)

50.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	16 - 269	5.5e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	35 - 265	7.7e-30	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0023954)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23700 AT1G23700 AT1G23700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	985, 1102
AccB1I	GGYRCC	1 cut(s)	547
AccB7I	CCANNNNNTGG	1 cut(s)	1223
AciI	CCGC	4 cut(s)	276, 349, 777, 863
AclWI	GGATC	4 cut(s)	752, 1039, 1156, 1208
AcsI	RAATTY	5 cut(s)	676, 710, 1250, 1313, 1406
AcuI	CTGAAG	1 cut(s)	908
AfaI	GTAC	5 cut(s)	423, 505, 841, 1149, 1302
AfeI	AGCGCT	2 cut(s)	963, 1080
AfiI	CCNNNNNNNGG	1 cut(s)	1223
AgsI	TTSAA	7 cut(s)	137, 289, 464, 589, 667, 959, 1076
AhlI	ACTAGT	1 cut(s)	506
AjnI	CCWGG	1 cut(s)	621
AloI	GAACNNNNNNTCC	2 cut(s)	785, 817
AluBI	AGCT	8 cut(s)	86, 189, 246, 365, 451, 743, 886, 1417
AluI	AGCT	8 cut(s)	86, 189, 246, 365, 451, 743, 886, 1417
Alw21I	GWGCWC	1 cut(s)	88
Alw26I	GTCTC	1 cut(s)	1351
AlwI	GGATC	4 cut(s)	752, 1039, 1156, 1208
Aor51HI	AGCGCT	2 cut(s)	963, 1080
AoxI	GGCC	2 cut(s)	853, 900
ApeKI	GCWGC	6 cut(s)	243, 565, 740, 964, 1081, 1389
ApoI	RAATTY	5 cut(s)	676, 710, 1250, 1313, 1406
AspLEI	GCGC	2 cut(s)	964, 1081
AsuHPI	GGTGA	4 cut(s)	3, 467, 636, 881
BanI	GGYRCC	1 cut(s)	547
BanII	GRGCYC	1 cut(s)	88
BbsI	GAAGAC	1 cut(s)	708
Bbv12I	GWGCWC	1 cut(s)	88
BbvI	GCAGC	6 cut(s)	255, 577, 752, 951, 1068, 1401
BccI	CCATC	8 cut(s)	65, 125, 405, 538, 569, 845, 917, 964
BciT130I	CCWGG	1 cut(s)	623
BclI	TGATCA	1 cut(s)	196
BcoDI	GTCTC	1 cut(s)	1351
BcuI	ACTAGT	1 cut(s)	506
BfaI	CTAG	5 cut(s)	386, 507, 837, 981, 1247
BfoI	RGCGCY	2 cut(s)	965, 1082
BfuAI	ACCTGC	2 cut(s)	985, 1102
BglII	AGATCT	2 cut(s)	123, 1362
BisI	GCNGC	7 cut(s)	244, 277, 566, 741, 965, 1082, 1390
BlsI	GCNGC	7 cut(s)	245, 278, 567, 742, 966, 1083, 1391
Bme1390I	CCNGG	1 cut(s)	623
BmiI	GGNNCC	5 cut(s)	131, 327, 549, 975, 1092
BmrFI	CCNGG	1 cut(s)	623
BmsI	GCATC	5 cut(s)	80, 249, 482, 489, 1265
BpiI	GAAGAC	1 cut(s)	708
BplI	GAGNNNNNCTC	2 cut(s)	13, 45
BpuEI	CTTGAG	3 cut(s)	341, 999, 1116
BsaJI	CCNNGG	3 cut(s)	621, 634, 651
BsaWI	WCCGGW	1 cut(s)	13
Bsc4I	CCNNNNNNNGG	1 cut(s)	1223
Bse1I	ACTGG	2 cut(s)	429, 795
Bse3DI	GCAATG	1 cut(s)	220
BseBI	CCWGG	1 cut(s)	623
BseDI	CCNNGG	3 cut(s)	621, 634, 651
BseGI	GGATG	5 cut(s)	199, 393, 473, 504, 549
BseLI	CCNNNNNNNGG	1 cut(s)	1223
BseMI	GCAATG	1 cut(s)	220
BseMII	CTCAG	5 cut(s)	447, 504, 543, 959, 1364
BseNI	ACTGG	2 cut(s)	429, 795
BseXI	GCAGC	6 cut(s)	255, 577, 752, 951, 1068, 1401
BseYI	CCCAGC	1 cut(s)	413
Bsh1285I	CGRYCG	1 cut(s)	777
BshFI	GGCC	2 cut(s)	855, 902
BshNI	GGYRCC	1 cut(s)	547
BsiEI	CGRYCG	1 cut(s)	777
BsiHKAI	GWGCWC	1 cut(s)	88
BsiSI	CCGG	2 cut(s)	14, 541
BslI	CCNNNNNNNGG	1 cut(s)	1223
BsmAI	GTCTC	1 cut(s)	1351
BsmI	GAATGC	1 cut(s)	93
BsnI	GGCC	2 cut(s)	855, 902
Bsp1286I	GDGCHC	1 cut(s)	88
Bsp1407I	TGTACA	1 cut(s)	1300
Bsp143I	GATC	9 cut(s)	123, 151, 196, 757, 1044, 1161, 1213, 1287, 1362
Bsp19I	CCATGG	1 cut(s)	634
BspACI	CCGC	4 cut(s)	276, 349, 777, 863
BspANI	GGCC	2 cut(s)	855, 902
BspCNI	CTCAG	5 cut(s)	446, 505, 544, 958, 1365
BspLI	GGNNCC	5 cut(s)	131, 327, 549, 975, 1092
BspMI	ACCTGC	2 cut(s)	985, 1102
BspPI	GGATC	4 cut(s)	752, 1039, 1156, 1208
BspQI	GCTCTTC	1 cut(s)	286
BspT107I	GGYRCC	1 cut(s)	547
BsrDI	GCAATG	1 cut(s)	220
BsrGI	TGTACA	1 cut(s)	1300
BsrI	ACTGG	2 cut(s)	429, 795
BssECI	CCNNGG	3 cut(s)	621, 634, 651
BssMI	GATC	9 cut(s)	123, 151, 196, 757, 1044, 1161, 1213, 1287, 1362
BssT1I	CCWWGG	1 cut(s)	634
Bst2UI	CCWGG	1 cut(s)	623
Bst4CI	ACNGT	2 cut(s)	445, 655
Bst6I	CTCTTC	2 cut(s)	54, 286
BstAUI	TGTACA	1 cut(s)	1300
BstC8I	GCNNGC	1 cut(s)	745
BstDEI	CTNAG	6 cut(s)	433, 513, 552, 717, 945, 1373
BstDSI	CCRYGG	2 cut(s)	634, 651
BstF5I	GGATG	5 cut(s)	199, 393, 473, 504, 549
BstH2I	RGCGCY	2 cut(s)	965, 1082
BstHHI	GCGC	2 cut(s)	964, 1081
BstKTI	GATC	9 cut(s)	126, 154, 199, 760, 1047, 1164, 1216, 1290, 1365
BstMAI	GTCTC	1 cut(s)	1351
BstMBI	GATC	9 cut(s)	123, 151, 196, 757, 1044, 1161, 1213, 1287, 1362
BstMCI	CGRYCG	1 cut(s)	777
BstMWI	GCNNNNNNNGC	1 cut(s)	871
BstNI	CCWGG	1 cut(s)	623
BstSCI	CCNGG	1 cut(s)	621
BstV1I	GCAGC	6 cut(s)	255, 577, 752, 951, 1068, 1401
BstV2I	GAAGAC	1 cut(s)	708
BstX2I	RGATCY	3 cut(s)	123, 757, 1362
BstXI	CCANNNNNNTGG	1 cut(s)	154
BstYI	RGATCY	3 cut(s)	123, 757, 1362
BsuRI	GGCC	2 cut(s)	855, 902
BtgI	CCRYGG	2 cut(s)	634, 651
BtgZI	GCGATG	1 cut(s)	84
BtsCI	GGATG	5 cut(s)	199, 393, 473, 504, 549
BveI	ACCTGC	2 cut(s)	985, 1102
Cac8I	GCNNGC	1 cut(s)	745
CfoI	GCGC	2 cut(s)	964, 1081
Csp6I	GTAC	5 cut(s)	422, 504, 840, 1148, 1301
CviAII	CATG	5 cut(s)	380, 478, 613, 635, 1280
CviQI	GTAC	5 cut(s)	422, 504, 840, 1148, 1301
DdeI	CTNAG	6 cut(s)	433, 513, 552, 717, 945, 1373
DpnI	GATC	9 cut(s)	125, 153, 198, 759, 1046, 1163, 1215, 1289, 1364
DpnII	GATC	9 cut(s)	123, 151, 196, 757, 1044, 1161, 1213, 1287, 1362
Eam1104I	CTCTTC	2 cut(s)	54, 286
EarI	CTCTTC	2 cut(s)	54, 286
Ecl136II	GAGCTC	1 cut(s)	86
Eco130I	CCWWGG	1 cut(s)	634
Eco24I	GRGCYC	1 cut(s)	88
Eco32I	GATATC	4 cut(s)	598, 1057, 1174, 1346
Eco47III	AGCGCT	2 cut(s)	963, 1080
Eco53kI	GAGCTC	1 cut(s)	86
Eco57I	CTGAAG	1 cut(s)	908
EcoICRI	GAGCTC	1 cut(s)	86
EcoRI	GAATTC	1 cut(s)	1313
EcoRII	CCWGG	1 cut(s)	621
EcoRV	GATATC	4 cut(s)	598, 1057, 1174, 1346
EcoT14I	CCWWGG	1 cut(s)	634
EcoT22I	ATGCAT	1 cut(s)	95
EcoT38I	GRGCYC	1 cut(s)	88
ErhI	CCWWGG	1 cut(s)	634
FaeI	CATG	5 cut(s)	383, 481, 616, 638, 1283
FatI	CATG	5 cut(s)	379, 477, 612, 634, 1279
FauI	CCCGC	1 cut(s)	342
FbaI	TGATCA	1 cut(s)	196
Fnu4HI	GCNGC	7 cut(s)	244, 277, 566, 741, 965, 1082, 1390
FokI	GGATG	5 cut(s)	186, 380, 460, 511, 556
FriOI	GRGCYC	1 cut(s)	88
Fsp4HI	GCNGC	7 cut(s)	244, 277, 566, 741, 965, 1082, 1390
FspBI	CTAG	5 cut(s)	386, 507, 837, 981, 1247
GlaI	GCGC	2 cut(s)	963, 1080
GluI	GCNGC	7 cut(s)	244, 277, 566, 741, 965, 1082, 1390
GsaI	CCCAGC	1 cut(s)	417
HaeII	RGCGCY	2 cut(s)	965, 1082
HaeIII	GGCC	2 cut(s)	855, 902
HapII	CCGG	2 cut(s)	14, 541
HhaI	GCGC	2 cut(s)	964, 1081
Hin1II	CATG	5 cut(s)	383, 481, 616, 638, 1283
Hin6I	GCGC	2 cut(s)	962, 1079
HinP1I	GCGC	2 cut(s)	962, 1079
HincII	GTYRAC	1 cut(s)	430
HindII	GTYRAC	1 cut(s)	430
HindIII	AAGCTT	1 cut(s)	1415
HinfI	GANTC	2 cut(s)	355, 431
HpaII	CCGG	2 cut(s)	14, 541
HphI	GGTGA	4 cut(s)	3, 467, 636, 881
Hpy166II	GTNNAC	7 cut(s)	11, 79, 373, 430, 991, 1108, 1380
Hpy188I	TCNGA	6 cut(s)	436, 514, 774, 1312, 1319, 1374
Hpy8I	GTNNAC	7 cut(s)	11, 79, 373, 430, 991, 1108, 1380
HpyAV	CCTTC	4 cut(s)	386, 431, 550, 883
HpyCH4III	ACNGT	2 cut(s)	445, 655
HpyCH4IV	ACGT	2 cut(s)	769, 1382
HpyCH4V	TGCA	7 cut(s)	93, 144, 220, 565, 1204, 1256, 1389
HpyF10VI	GCNNNNNNNGC	1 cut(s)	871
HpyF3I	CTNAG	6 cut(s)	433, 513, 552, 717, 945, 1373
HpySE526I	ACGT	2 cut(s)	769, 1382
Hsp92II	CATG	5 cut(s)	383, 481, 616, 638, 1283
HspAI	GCGC	2 cut(s)	962, 1079
Ksp22I	TGATCA	1 cut(s)	196
Kzo9I	GATC	9 cut(s)	123, 151, 196, 757, 1044, 1161, 1213, 1287, 1362
LguI	GCTCTTC	1 cut(s)	286
Lsp1109I	GCAGC	6 cut(s)	255, 577, 752, 951, 1068, 1401
LweI	GCATC	5 cut(s)	80, 249, 482, 489, 1265
MaeI	CTAG	5 cut(s)	386, 507, 837, 981, 1247
MaeII	ACGT	2 cut(s)	769, 1382
MaeIII	GTNAC	3 cut(s)	455, 926, 1268
MalI	GATC	9 cut(s)	125, 153, 198, 759, 1046, 1163, 1215, 1289, 1364
MboI	GATC	9 cut(s)	123, 151, 196, 757, 1044, 1161, 1213, 1287, 1362
MboII	GAAGA	6 cut(s)	71, 273, 710, 713, 767, 1251
MflI	RGATCY	3 cut(s)	123, 757, 1362
MhlI	GDGCHC	1 cut(s)	88
MluCI	AATT	8 cut(s)	108, 192, 333, 676, 710, 1250, 1313, 1406
MlyI	GAGTC	1 cut(s)	425
MmeI	TCCRAC	3 cut(s)	508, 797, 1241
MnlI	CCTC	9 cut(s)	39, 207, 316, 866, 886, 1031, 1148, 1368, 1388
Mph1103I	ATGCAT	1 cut(s)	95
MseI	TTAA	8 cut(s)	191, 360, 408, 447, 912, 1190, 1199, 1420
MslI	CAYNNNNRTG	1 cut(s)	402
MspI	CCGG	2 cut(s)	14, 541
MspR9I	CCNGG	1 cut(s)	623
Mva1269I	GAATGC	1 cut(s)	93
MvaI	CCWGG	1 cut(s)	623
MwoI	GCNNNNNNNGC	1 cut(s)	871
NcoI	CCATGG	1 cut(s)	634
NdeII	GATC	9 cut(s)	123, 151, 196, 757, 1044, 1161, 1213, 1287, 1362
NlaIII	CATG	5 cut(s)	383, 481, 616, 638, 1283
NlaIV	GGNNCC	5 cut(s)	131, 327, 549, 975, 1092
NmuCI	GTSAC	1 cut(s)	455
NsiI	ATGCAT	1 cut(s)	95
PciSI	GCTCTTC	1 cut(s)	286
PctI	GAATGC	1 cut(s)	93
PfeI	GAWTC	1 cut(s)	355
PflMI	CCANNNNNTGG	1 cut(s)	1223
PkrI	GCNGC	7 cut(s)	245, 278, 567, 742, 966, 1083, 1391
PleI	GAGTC	1 cut(s)	425
PpsI	GAGTC	1 cut(s)	425
Psp124BI	GAGCTC	1 cut(s)	88
Psp6I	CCWGG	1 cut(s)	621
PspFI	CCCAGC	1 cut(s)	413
PspGI	CCWGG	1 cut(s)	621
PspN4I	GGNNCC	5 cut(s)	131, 327, 549, 975, 1092
PsuI	RGATCY	3 cut(s)	123, 757, 1362
RsaI	GTAC	5 cut(s)	423, 505, 841, 1149, 1302
RsaNI	GTAC	5 cut(s)	422, 504, 840, 1148, 1301
RseI	CAYNNNNRTG	1 cut(s)	402
SacI	GAGCTC	1 cut(s)	88
SapI	GCTCTTC	1 cut(s)	286
SaqAI	TTAA	8 cut(s)	191, 360, 408, 447, 912, 1190, 1199, 1420
SatI	GCNGC	7 cut(s)	244, 277, 566, 741, 965, 1082, 1390
Sau3AI	GATC	9 cut(s)	123, 151, 196, 757, 1044, 1161, 1213, 1287, 1362
SchI	GAGTC	1 cut(s)	425
ScrFI	CCNGG	1 cut(s)	623
SduI	GDGCHC	1 cut(s)	88
SfaNI	GCATC	5 cut(s)	80, 249, 482, 489, 1265
SmiMI	CAYNNNNRTG	1 cut(s)	402
SmlI	CTYRAG	3 cut(s)	320, 1014, 1131
SmoI	CTYRAG	3 cut(s)	320, 1014, 1131
SpeI	ACTAGT	1 cut(s)	506
Sse9I	AATT	8 cut(s)	108, 192, 333, 676, 710, 1250, 1313, 1406
SsiI	CCGC	4 cut(s)	276, 349, 777, 863
SspMI	CTAG	5 cut(s)	386, 507, 837, 981, 1247
SstI	GAGCTC	1 cut(s)	88
StyD4I	CCNGG	1 cut(s)	621
StyI	CCWWGG	1 cut(s)	634
TaaI	ACNGT	2 cut(s)	445, 655
TaiI	ACGT	2 cut(s)	772, 1385
TaqI	TCGA	2 cut(s)	88, 400
TasI	AATT	8 cut(s)	108, 192, 333, 676, 710, 1250, 1313, 1406
TatI	WGTACW	3 cut(s)	421, 839, 1300
TauI	GCSGC	1 cut(s)	279
TfiI	GAWTC	1 cut(s)	355
Tru1I	TTAA	8 cut(s)	191, 360, 408, 447, 912, 1190, 1199, 1420
Tru9I	TTAA	8 cut(s)	191, 360, 408, 447, 912, 1190, 1199, 1420
TseFI	GTSAC	1 cut(s)	455
TseI	GCWGC	6 cut(s)	243, 565, 740, 964, 1081, 1389
Tsp45I	GTSAC	1 cut(s)	455
TspDTI	ATGAA	6 cut(s)	120, 167, 220, 311, 368, 711
TspGWI	ACGGA	2 cut(s)	789, 1103
Van91I	CCANNNNNTGG	1 cut(s)	1223
XapI	RAATTY	5 cut(s)	676, 710, 1250, 1313, 1406
XspI	CTAG	5 cut(s)	386, 507, 837, 981, 1247
Zsp2I	ATGCAT	1 cut(s)	95

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.