AT1G24159

L-type lectin-domain containing receptor kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
8552775 .. 8553385
611 bp
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UTR
Exon/CDS
Intron
AT1G24159.1

Sequence Viewer

Length: 423 bp
ATGATGCTACTTTCAAAAGCATCTCTCTTGACAGCTGAAACTCTACGTAGCTCCAAGAACAGCTTAATGCTACTACATGCTACTCGTGTGTCTAAACCACCTCTACTTACTTTTCTGTACAGGTTGCTTGATGAGAGGCTCAAGCCTAGGTACCCAGAGGAGCAGCTGGCAGTAGTTTTGCGTGGCTTCCTTTGTTTGCATTTGGTTGCAGCTTTCAGATCAAACGTGTCGAGCATCATTCAATTCTTAGACAATGTGGCTCAGTTTTCTCACAATTTGCTTGGCATGGTGAAATCTCCAAAAATAAATGGAGCCAACTCAAACCACATAATCATGGGAGAAGATCAAACCCATGATGGTAACACTAAAATATCATCAGAAGAAACTGAATCTACAATTCTATCTAATGGGGTTGTAGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

140

Amino Acids

15.56

Weight (kDa)

7.94

Isoelectric Point (pI)

37.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0026897)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G24159 AT1G70130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 150
AccB1I GGYRCC 1 cut(s) 150
AfaI GTAC 2 cut(s) 119, 152
AflIII ACRYGT 1 cut(s) 225
AgsI TTSAA 2 cut(s) 15, 242
AluBI AGCT 5 cut(s) 35, 51, 63, 166, 212
AluI AGCT 5 cut(s) 35, 51, 63, 166, 212
ApeKI GCWGC 2 cut(s) 163, 209
Asp718I GGTACC 1 cut(s) 150
AspA2I CCTAGG 1 cut(s) 146
AsuHPI GGTGA 1 cut(s) 301
AvrII CCTAGG 1 cut(s) 146
BanI GGYRCC 1 cut(s) 150
BauI CACGAG 1 cut(s) 84
BbvI GCAGC 2 cut(s) 175, 221
BccI CCATC 1 cut(s) 350
BfaI CTAG 1 cut(s) 147
BisI GCNGC 2 cut(s) 164, 210
BlnI CCTAGG 1 cut(s) 146
BlsI GCNGC 2 cut(s) 165, 211
BmiI GGNNCC 2 cut(s) 152, 313
BmsI GCATC 2 cut(s) 29, 243
BpuEI CTTGAG 1 cut(s) 125
BsaAI YACGTR 1 cut(s) 47
BsaJI CCNNGG 1 cut(s) 146
BseDI CCNNGG 1 cut(s) 146
BseMII CTCAG 1 cut(s) 275
BseRI GAGGAG 1 cut(s) 173
BseXI GCAGC 2 cut(s) 175, 221
BshNI GGYRCC 1 cut(s) 150
Bsp1407I TGTACA 1 cut(s) 117
Bsp143I GATC 2 cut(s) 218, 343
BspCNI CTCAG 1 cut(s) 274
BspLI GGNNCC 2 cut(s) 152, 313
BspT107I GGYRCC 1 cut(s) 150
BsrGI TGTACA 1 cut(s) 117
BssECI CCNNGG 1 cut(s) 146
BssMI GATC 2 cut(s) 218, 343
BssSI CACGAG 1 cut(s) 84
BssT1I CCWWGG 1 cut(s) 146
Bst2BI CACGAG 1 cut(s) 84
BstAUI TGTACA 1 cut(s) 117
BstBAI YACGTR 1 cut(s) 47
BstC8I GCNNGC 1 cut(s) 168
BstDEI CTNAG 2 cut(s) 247, 261
BstKTI GATC 2 cut(s) 221, 346
BstMBI GATC 2 cut(s) 218, 343
BstNSI RCATGY 1 cut(s) 80
BstSNI TACGTA 1 cut(s) 47
BstV1I GCAGC 2 cut(s) 175, 221
Cac8I GCNNGC 1 cut(s) 168
Csp6I GTAC 2 cut(s) 118, 151
CviAII CATG 4 cut(s) 77, 286, 334, 353
CviQI GTAC 2 cut(s) 118, 151
DdeI CTNAG 2 cut(s) 247, 261
DpnI GATC 2 cut(s) 220, 345
DpnII GATC 2 cut(s) 218, 343
Eco105I TACGTA 1 cut(s) 47
Eco130I CCWWGG 1 cut(s) 146
EcoT14I CCWWGG 1 cut(s) 146
ErhI CCWWGG 1 cut(s) 146
FaeI CATG 4 cut(s) 80, 289, 337, 356
FaiI YATR 5 cut(s) 78, 287, 329, 335, 354
FalI AAGNNNNNCTT 2 cut(s) 47, 79
FatI CATG 4 cut(s) 76, 285, 333, 352
Fnu4HI GCNGC 2 cut(s) 164, 210
Fsp4HI GCNGC 2 cut(s) 164, 210
FspBI CTAG 1 cut(s) 147
GluI GCNGC 2 cut(s) 164, 210
Hin1II CATG 4 cut(s) 80, 289, 337, 356
HinfI GANTC 1 cut(s) 389
HphI GGTGA 1 cut(s) 301
Hpy188I TCNGA 2 cut(s) 218, 379
Hpy188III TCNNGA 1 cut(s) 28
HpyCH4IV ACGT 2 cut(s) 46, 225
HpyCH4V TGCA 2 cut(s) 199, 209
HpyF3I CTNAG 2 cut(s) 247, 261
HpySE526I ACGT 2 cut(s) 46, 225
Hsp92II CATG 4 cut(s) 80, 289, 337, 356
KpnI GGTACC 1 cut(s) 154
Kzo9I GATC 2 cut(s) 218, 343
LmnI GCTCC 3 cut(s) 56, 160, 311
LpnPI CCDG 3 cut(s) 106, 152, 168
Lsp1109I GCAGC 2 cut(s) 175, 221
LweI GCATC 2 cut(s) 29, 243
MaeI CTAG 1 cut(s) 147
MaeII ACGT 2 cut(s) 46, 225
MaeIII GTNAC 1 cut(s) 359
MalI GATC 2 cut(s) 220, 345
MboI GATC 2 cut(s) 218, 343
MboII GAAGA 2 cut(s) 353, 392
MluCI AATT 3 cut(s) 242, 274, 396
MnlI CCTC 3 cut(s) 111, 129, 151
MseI TTAA 1 cut(s) 65
MslI CAYNNNNRTG 1 cut(s) 332
MspA1I CMGCKG 2 cut(s) 35, 166
NdeII GATC 2 cut(s) 218, 343
NlaIII CATG 4 cut(s) 80, 289, 337, 356
NlaIV GGNNCC 2 cut(s) 152, 313
NspI RCATGY 1 cut(s) 80
PfeI GAWTC 1 cut(s) 389
PkrI GCNGC 2 cut(s) 165, 211
Ppu21I YACGTR 1 cut(s) 47
PspN4I GGNNCC 2 cut(s) 152, 313
PvuII CAGCTG 2 cut(s) 35, 166
RsaI GTAC 2 cut(s) 119, 152
RsaNI GTAC 2 cut(s) 118, 151
RseI CAYNNNNRTG 1 cut(s) 332
SaqAI TTAA 1 cut(s) 65
SatI GCNGC 2 cut(s) 164, 210
Sau3AI GATC 2 cut(s) 218, 343
SfaNI GCATC 2 cut(s) 29, 243
SmiMI CAYNNNNRTG 1 cut(s) 332
SmlI CTYRAG 1 cut(s) 140
SmoI CTYRAG 1 cut(s) 140
SnaBI TACGTA 1 cut(s) 47
Sse9I AATT 3 cut(s) 242, 274, 396
SspMI CTAG 1 cut(s) 147
StyI CCWWGG 1 cut(s) 146
TaiI ACGT 2 cut(s) 49, 228
TaqI TCGA 1 cut(s) 230
TasI AATT 3 cut(s) 242, 274, 396
TatI WGTACW 1 cut(s) 117
TfiI GAWTC 1 cut(s) 389
Tru1I TTAA 1 cut(s) 65
Tru9I TTAA 1 cut(s) 65
TseI GCWGC 2 cut(s) 163, 209
XceI RCATGY 1 cut(s) 80
XmaJI CCTAGG 1 cut(s) 146
XspI CTAG 1 cut(s) 147
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.