AT1G48600

phosphoethanolamine N-methyltransferase activity

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
17965871 .. 17969354
3484 bp
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UTR
Exon/CDS
Intron
AT1G48600.2

Sequence Viewer

Length: 1428 bp
ATGGAGCATTCTAGTGATTTGACTGTTGAAGCTATGATGCTTGACTCTAAAGCTTCTGATCTTGACAAAGAAGAACGTCCTGAGGTACTCTCTTTAATCCCACCATATGAAGGGAAATCTGTGCTTGAACTTGGAGCTGGTATTGGTCGTTTCACTGGTGAATTGGCTCAAAAGGCTGGTGAAGTTATCGCTCTTGACTTCATCGAAAGCGCGATTCAGAAGAATGAAAGTGTTAATGGGCATTACAAGAACATCAAGTTTATGTGTGCTGATGTAACATCTCCAGACTTGAAAATCAAAGATGGATCTATCGACTTGATTTTCTCAAACTGGTTGCTCATGTATCTCTCTGATAAAGAGGTGGAACTAATGGCAGAGAGAATGATTGGATGGGTCAAGCCAGGGGGATACATTTTCTTCAGAGAATCTTGCTTCCATCAATCTGGGGACAGCAAGCGAAAGTCAAACCCCACTCACTACCGTGAACCCAGATTCTACACAAAGGTTTTCCAGGAATGTCAGACACGTGATGCTTCTGGCAATTCATTTGAGCTCTCTATGGTTGGCTGCAAATGCATTGGGGCTTATGTGAAGAACAAGAAGAATCAGAATCAGATTTGCTGGATATGGCAAAAAGTCAGCGTGGAGAATGACAAGGATTTCCAGCGTTTCTTGGACAATGTTCAATACAAGTCTAGTGGGATCTTGCGCTATGAGCGTGTCTTTGGGGAAGGATATGTGAGCACTGGTGGATTTGAGACAACTAAAGAATTTGTGGCGAAGATGGACCTTAAACCGGGACAGAAAGTCCTAGATGTTGGTTGTGGTATCGGTGGAGGTGACTTCTACATGGCTGAGAATTTCGATGTTCATGTTGTTGGAATCGATCTGTCGGTCAACATGATCTCTTTCGCACTGGAGCGGGCCATTGGACTCAAATGCTCAGTCGAGTTTGAAGTCGCTGATTGCACCACCAAAACATATCCCGATAATTCCTTTGATGTCATTTACAGCCGTGACACTATTCTGCACATCCAAGACAAGCCAGCTCTATTCAGGACATTCTTCAAGTGGCTTAAACCAGGGGGTAAAGTTCTCATCACTGACTATTGCAGAAGTGCTGAAACTCCGTCTCCTGAATTCGCAGAGTACATAAAACAAAGAGGATATGATCTACATGATGTTCAAGCTTACGGACAGATGCTGAAAGACGCAGGCTTTGACGACGTTATCGCTGAGGACCGTACTGATCAGTTTGTACAAGTCCTCAGGCGTGAATTAGAAAAAGTGGAGAAAGAAAAGGAAGAATTCATCAGCGACTTCTCAGAAGAGGATTACAATGACATTGTTGGAGGATGGTCGGCAAAGCTTGAAAGGACTGCATCTGGTGAACAGAAATGGGGATTATTCATAGCCGACAAGAAGTAA

Protein Analysis

475

Amino Acids

54.02

Weight (kDa)

5.04

Isoelectric Point (pI)

29.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_23 PF13489 51 - 162 9.3e-07 Methyltransferase domain
Methyltransf_31 PF13847 54 - 177 1.2e-13 Methyltransferase domain
Methyltransf_PK PF05891 55 - 190 4.5e-08 AdoMet dependent proline di-methyltransferase
Methyltransf_25 PF13649 57 - 152 1.7e-14 Methyltransferase domain
Methyltransf_11 PF08241 58 - 156 8.3e-14 Methyltransferase domain
Methyltransf_12 PF08242 58 - 154 2.9e-08 Methyltransferase domain
Ubie_methyltran PF01209 270 - 389 5.4e-11 ubiE/COQ5 methyltransferase family
CMAS PF02353 272 - 462 7.9e-15 Mycolic acid cyclopropane synthetase
Methyltransf_23 PF13489 276 - 426 1.7e-20 Methyltransferase domain
MetW PF07021 280 - 362 2.1e-06 Methionine biosynthesis protein MetW
Methyltransf_31 PF13847 281 - 395 1.3e-23 Methyltransferase domain
Methyltransf_25 PF13649 286 - 379 1.1e-19 Methyltransferase domain
Methyltransf_11 PF08241 287 - 383 1.1e-19 Methyltransferase domain
Methyltransf_12 PF08242 287 - 380 1.1e-13 Methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0026731)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48600
rosa_samantha Rh3AG289000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 922
AccII CGCG 1 cut(s) 212
AciI CCGC 1 cut(s) 922
AclWI GGATC 2 cut(s) 313, 710
AcsI RAATTY 4 cut(s) 770, 859, 1139, 1307
AcuI CTGAAG 1 cut(s) 403
AcvI CACGTG 1 cut(s) 527
AfaI GTAC 4 cut(s) 87, 1151, 1246, 1260
AfiI CCNNNNNNNGG 2 cut(s) 110, 796
AflIII ACRYGT 1 cut(s) 524
AgsI TTSAA 8 cut(s) 29, 128, 292, 686, 956, 1069, 1187, 1373
AhdI GACNNNNNGTC 1 cut(s) 806
AjnI CCWGG 3 cut(s) 400, 510, 1081
AleI CACNNNNGTG 1 cut(s) 480
AluBI AGCT 7 cut(s) 32, 53, 137, 553, 1049, 1190, 1369
AluI AGCT 7 cut(s) 32, 53, 137, 553, 1049, 1190, 1369
Alw21I GWGCWC 2 cut(s) 555, 746
Alw26I GTCTC 2 cut(s) 752, 1137
AlwI GGATC 2 cut(s) 313, 710
AlwNI CAGNNNCTG 1 cut(s) 1204
AoxI GGCC 1 cut(s) 924
ApeKI GCWGC 1 cut(s) 567
ApoI RAATTY 4 cut(s) 770, 859, 1139, 1307
ArsI GACNNNNNNTTYG 4 cut(s) 930, 962, 1202, 1234
AspLEI GCGC 2 cut(s) 212, 711
AspS9I GGNCC 3 cut(s) 787, 924, 1240
AsuC2I CCSGG 1 cut(s) 798
AsuHPI GGTGA 4 cut(s) 170, 191, 851, 1400
AvaII GGWCC 2 cut(s) 787, 1240
AxyI CCTNAGG 2 cut(s) 81, 1268
BanII GRGCYC 1 cut(s) 555
BbrPI CACGTG 1 cut(s) 527
Bbv12I GWGCWC 2 cut(s) 555, 746
BbvCI CCTCAGC 1 cut(s) 1236
BbvI GCAGC 1 cut(s) 554
BccI CCATC 5 cut(s) 296, 384, 444, 778, 1350
BceAI ACGGC 1 cut(s) 999
BciT130I CCWGG 3 cut(s) 402, 512, 1083
BciVI GTATCC 1 cut(s) 401
BclI TGATCA 1 cut(s) 1249
BcnI CCSGG 1 cut(s) 798
BcoDI GTCTC 2 cut(s) 752, 1137
BfaI CTAG 3 cut(s) 12, 696, 812
BfuI GTATCC 1 cut(s) 401
BisI GCNGC 1 cut(s) 568
BlsI GCNGC 1 cut(s) 569
Bme1390I CCNGG 4 cut(s) 402, 512, 798, 1083
Bme18I GGWCC 2 cut(s) 787, 1240
BmeRI GACNNNNNGTC 1 cut(s) 806
BmgT120I GGNCC 3 cut(s) 787, 924, 1240
BmrFI CCNGG 4 cut(s) 402, 512, 798, 1083
BmsI GCATC 4 cut(s) 27, 520, 1191, 1391
BplI GAGNNNNNCTC 2 cut(s) 74, 106
BpmI CTGGAG 2 cut(s) 267, 938
Bpu10I CCTNAGC 1 cut(s) 1236
BpuMI CCSGG 1 cut(s) 798
Bsa29I ATCGAT 1 cut(s) 885
BsaAI YACGTR 1 cut(s) 527
BsaJI CCNNGG 2 cut(s) 401, 1082
BsaXI ACNNNNNCTCC 2 cut(s) 1117, 1147
Bsc4I CCNNNNNNNGG 2 cut(s) 110, 796
Bse1I ACTGG 4 cut(s) 160, 335, 751, 921
Bse21I CCTNAGG 2 cut(s) 81, 1268
BseBI CCWGG 3 cut(s) 402, 512, 1083
BseCI ATCGAT 1 cut(s) 885
BseDI CCNNGG 2 cut(s) 401, 1082
BseGI GGATG 3 cut(s) 395, 1032, 1361
BseLI CCNNNNNNNGG 2 cut(s) 110, 796
BseMII CTCAG 6 cut(s) 72, 846, 957, 1227, 1282, 1338
BseNI ACTGG 4 cut(s) 160, 335, 751, 921
BseXI GCAGC 1 cut(s) 554
BsgI GTGCAG 1 cut(s) 1013
Bsh1236I CGCG 1 cut(s) 212
BshFI GGCC 1 cut(s) 926
BshVI ATCGAT 1 cut(s) 885
BsiHKAI GWGCWC 2 cut(s) 555, 746
BsiSI CCGG 1 cut(s) 797
BslFI GGGAC 2 cut(s) 461, 813
BslI CCNNNNNNNGG 2 cut(s) 110, 796
BsmAI GTCTC 2 cut(s) 752, 1137
BsmBI CGTCTC 1 cut(s) 1137
BsmFI GGGAC 2 cut(s) 461, 813
BsmI GAATGC 1 cut(s) 7
BsnI GGCC 1 cut(s) 926
Bsp1286I GDGCHC 2 cut(s) 555, 746
Bsp1407I TGTACA 1 cut(s) 1258
Bsp143I GATC 7 cut(s) 58, 305, 702, 886, 903, 1171, 1249
BspACI CCGC 1 cut(s) 922
BspANI GGCC 1 cut(s) 926
BspCNI CTCAG 6 cut(s) 73, 847, 956, 1228, 1281, 1337
BspDI ATCGAT 1 cut(s) 885
BspFNI CGCG 1 cut(s) 212
BspPI GGATC 2 cut(s) 313, 710
BsrBI CCGCTC 1 cut(s) 922
BsrGI TGTACA 1 cut(s) 1258
BsrI ACTGG 4 cut(s) 160, 335, 751, 921
BssECI CCNNGG 2 cut(s) 401, 1082
BssMI GATC 7 cut(s) 58, 305, 702, 886, 903, 1171, 1249
Bst2UI CCWGG 3 cut(s) 402, 512, 1083
Bst4CI ACNGT 3 cut(s) 25, 482, 1244
Bst6I CTCTTC 1 cut(s) 1323
BstAUI TGTACA 1 cut(s) 1258
BstBAI YACGTR 1 cut(s) 527
BstC8I GCNNGC 4 cut(s) 455, 924, 1047, 1216
BstDEI CTNAG 6 cut(s) 81, 855, 943, 1236, 1268, 1324
BstF5I GGATG 3 cut(s) 395, 1032, 1361
BstFNI CGCG 1 cut(s) 212
BstHHI GCGC 2 cut(s) 212, 711
BstKTI GATC 7 cut(s) 61, 308, 705, 889, 906, 1174, 1252
BstMAI GTCTC 2 cut(s) 752, 1137
BstMBI GATC 7 cut(s) 58, 305, 702, 886, 903, 1171, 1249
BstMWI GCNNNNNNNGC 3 cut(s) 173, 573, 715
BstNI CCWGG 3 cut(s) 402, 512, 1083
BstSCI CCNGG 4 cut(s) 400, 510, 796, 1081
BstUI CGCG 1 cut(s) 212
BstV1I GCAGC 1 cut(s) 554
BstX2I RGATCY 2 cut(s) 305, 702
BstXI CCANNNNNNTGG 1 cut(s) 443
BstYI RGATCY 2 cut(s) 305, 702
Bsu15I ATCGAT 1 cut(s) 885
Bsu36I CCTNAGG 2 cut(s) 81, 1268
BsuI GTATCC 1 cut(s) 401
BsuRI GGCC 1 cut(s) 926
BsuTUI ATCGAT 1 cut(s) 885
BtsCI GGATG 3 cut(s) 395, 1032, 1361
BtsIMutI CAGTG 4 cut(s) 153, 744, 914, 1101
Cac8I GCNNGC 4 cut(s) 455, 924, 1047, 1216
CaiI CAGNNNCTG 1 cut(s) 1204
CfoI GCGC 2 cut(s) 212, 711
Cfr13I GGNCC 3 cut(s) 787, 924, 1240
ClaI ATCGAT 1 cut(s) 885
CseI GACGC 1 cut(s) 1220
Csp6I GTAC 4 cut(s) 86, 1150, 1245, 1259
CspCI CAANNNNNGTGG 2 cut(s) 679, 714
CviAII CATG 5 cut(s) 340, 850, 872, 901, 1178
CviQI GTAC 4 cut(s) 86, 1150, 1245, 1259
DdeI CTNAG 6 cut(s) 81, 855, 943, 1236, 1268, 1324
DpnI GATC 7 cut(s) 60, 307, 704, 888, 905, 1173, 1251
DpnII GATC 7 cut(s) 58, 305, 702, 886, 903, 1171, 1249
DriI GACNNNNNGTC 1 cut(s) 806
Eam1104I CTCTTC 1 cut(s) 1323
Eam1105I GACNNNNNGTC 1 cut(s) 806
EarI CTCTTC 1 cut(s) 1323
Ecl136II GAGCTC 1 cut(s) 553
Eco24I GRGCYC 1 cut(s) 555
Eco47I GGWCC 2 cut(s) 787, 1240
Eco53kI GAGCTC 1 cut(s) 553
Eco57I CTGAAG 1 cut(s) 403
Eco72I CACGTG 1 cut(s) 527
Eco81I CCTNAGG 2 cut(s) 81, 1268
EcoICRI GAGCTC 1 cut(s) 553
EcoRI GAATTC 2 cut(s) 1139, 1307
EcoRII CCWGG 3 cut(s) 400, 510, 1081
EcoT22I ATGCAT 1 cut(s) 578
EcoT38I GRGCYC 1 cut(s) 555
Esp3I CGTCTC 1 cut(s) 1137
FaeI CATG 5 cut(s) 343, 853, 875, 904, 1181
FaqI GGGAC 2 cut(s) 461, 813
FatI CATG 5 cut(s) 339, 849, 871, 900, 1177
FauI CCCGC 1 cut(s) 915
FauNDI CATATG 1 cut(s) 106
FbaI TGATCA 1 cut(s) 1249
Fnu4HI GCNGC 1 cut(s) 568
FokI GGATG 3 cut(s) 402, 1019, 1368
FriOI GRGCYC 1 cut(s) 555
Fsp4HI GCNGC 1 cut(s) 568
FspBI CTAG 3 cut(s) 12, 696, 812
GlaI GCGC 2 cut(s) 211, 710
GluI GCNGC 1 cut(s) 568
GsuI CTGGAG 2 cut(s) 267, 938
HaeIII GGCC 1 cut(s) 926
HapII CCGG 1 cut(s) 797
HgaI GACGC 1 cut(s) 1220
HhaI GCGC 2 cut(s) 212, 711
Hin1II CATG 5 cut(s) 343, 853, 875, 904, 1181
Hin6I GCGC 2 cut(s) 210, 709
HinP1I GCGC 2 cut(s) 210, 709
HincII GTYRAC 1 cut(s) 898
HindII GTYRAC 1 cut(s) 898
HindIII AAGCTT 3 cut(s) 51, 1188, 1367
HinfI GANTC 8 cut(s) 44, 214, 425, 492, 604, 610, 882, 933
HpaII CCGG 1 cut(s) 797
HphI GGTGA 4 cut(s) 170, 191, 851, 1400
Hpy166II GTNNAC 3 cut(s) 485, 898, 1391
Hpy188I TCNGA 8 cut(s) 58, 219, 352, 422, 522, 609, 615, 1327
Hpy188III TCNNGA 7 cut(s) 62, 80, 194, 284, 986, 1057, 1136
Hpy8I GTNNAC 3 cut(s) 485, 898, 1391
Hpy99I CGWCG 1 cut(s) 1229
HpyAV CCTTC 2 cut(s) 104, 725
HpyCH4III ACNGT 3 cut(s) 25, 482, 1244
HpyCH4IV ACGT 3 cut(s) 76, 526, 1227
HpyCH4V TGCA 6 cut(s) 570, 576, 969, 1030, 1113, 1382
HpyF10VI GCNNNNNNNGC 3 cut(s) 173, 573, 715
HpyF3I CTNAG 6 cut(s) 81, 855, 943, 1236, 1268, 1324
HpySE526I ACGT 3 cut(s) 76, 526, 1227
Hsp92II CATG 5 cut(s) 343, 853, 875, 904, 1181
HspAI GCGC 2 cut(s) 210, 709
Ksp22I TGATCA 1 cut(s) 1249
Kzo9I GATC 7 cut(s) 58, 305, 702, 886, 903, 1171, 1249
LmnI GCTCC 3 cut(s) 4, 134, 919
Lsp1109I GCAGC 1 cut(s) 554
LweI GCATC 4 cut(s) 27, 520, 1191, 1391
MaeI CTAG 3 cut(s) 12, 696, 812
MaeII ACGT 3 cut(s) 76, 526, 1227
MaeIII GTNAC 3 cut(s) 274, 839, 1016
MalI GATC 7 cut(s) 60, 307, 704, 888, 905, 1173, 1251
MbiI CCGCTC 1 cut(s) 922
MboI GATC 7 cut(s) 58, 305, 702, 886, 903, 1171, 1249
MboII GAAGA 9 cut(s) 83, 232, 409, 604, 613, 793, 1057, 1316, 1340
MflI RGATCY 2 cut(s) 305, 702
MhlI GDGCHC 2 cut(s) 555, 746
MluCI AATT 8 cut(s) 161, 541, 770, 859, 991, 1139, 1277, 1307
MlyI GAGTC 2 cut(s) 38, 927
MmeI TCCRAC 2 cut(s) 859, 1330
MnlI CCTC 8 cut(s) 76, 352, 830, 1157, 1231, 1277, 1324, 1346
Mph1103I ATGCAT 1 cut(s) 578
MseI TTAA 4 cut(s) 95, 234, 792, 1077
MslI CAYNNNNRTG 2 cut(s) 12, 480
MspI CCGG 1 cut(s) 797
MspR9I CCNGG 4 cut(s) 402, 512, 798, 1083
Mva1269I GAATGC 1 cut(s) 7
MvaI CCWGG 3 cut(s) 402, 512, 1083
MvnI CGCG 1 cut(s) 212
MwoI GCNNNNNNNGC 3 cut(s) 173, 573, 715
NciI CCSGG 1 cut(s) 798
NdeI CATATG 1 cut(s) 106
NdeII GATC 7 cut(s) 58, 305, 702, 886, 903, 1171, 1249
NlaIII CATG 5 cut(s) 343, 853, 875, 904, 1181
NmuCI GTSAC 2 cut(s) 839, 1016
NsiI ATGCAT 1 cut(s) 578
OliI CACNNNNGTG 1 cut(s) 480
PctI GAATGC 1 cut(s) 7
PfeI GAWTC 6 cut(s) 214, 425, 492, 604, 610, 882
PfoI TCCNGGA 1 cut(s) 510
PkrI GCNGC 1 cut(s) 569
PleI GAGTC 2 cut(s) 38, 927
PmaCI CACGTG 1 cut(s) 527
PmlI CACGTG 1 cut(s) 527
PpsI GAGTC 2 cut(s) 38, 927
Ppu21I YACGTR 1 cut(s) 527
Psp124BI GAGCTC 1 cut(s) 555
Psp6I CCWGG 3 cut(s) 400, 510, 1081
PspCI CACGTG 1 cut(s) 527
PspGI CCWGG 3 cut(s) 400, 510, 1081
PspPI GGNCC 3 cut(s) 787, 924, 1240
PstNI CAGNNNCTG 1 cut(s) 1204
PsuI RGATCY 2 cut(s) 305, 702
RsaI GTAC 4 cut(s) 87, 1151, 1246, 1260
RsaNI GTAC 4 cut(s) 86, 1150, 1245, 1259
RseI CAYNNNNRTG 2 cut(s) 12, 480
SacI GAGCTC 1 cut(s) 555
SaqAI TTAA 4 cut(s) 95, 234, 792, 1077
SatI GCNGC 1 cut(s) 568
Sau3AI GATC 7 cut(s) 58, 305, 702, 886, 903, 1171, 1249
Sau96I GGNCC 3 cut(s) 787, 924, 1240
SchI GAGTC 2 cut(s) 38, 927
ScrFI CCNGG 4 cut(s) 402, 512, 798, 1083
SduI GDGCHC 2 cut(s) 555, 746
SfaNI GCATC 4 cut(s) 27, 520, 1191, 1391
SinI GGWCC 2 cut(s) 787, 1240
SmiMI CAYNNNNRTG 2 cut(s) 12, 480
Sse9I AATT 8 cut(s) 161, 541, 770, 859, 991, 1139, 1277, 1307
SsiI CCGC 1 cut(s) 922
SspMI CTAG 3 cut(s) 12, 696, 812
SstI GAGCTC 1 cut(s) 555
StyD4I CCNGG 4 cut(s) 400, 510, 796, 1081
TaaI ACNGT 3 cut(s) 25, 482, 1244
TaiI ACGT 3 cut(s) 79, 529, 1230
TaqI TCGA 5 cut(s) 204, 312, 864, 885, 948
TaqII GACCGA 1 cut(s) 883
TasI AATT 8 cut(s) 161, 541, 770, 859, 991, 1139, 1277, 1307
TatI WGTACW 2 cut(s) 1149, 1258
TfiI GAWTC 6 cut(s) 214, 425, 492, 604, 610, 882
Tru1I TTAA 4 cut(s) 95, 234, 792, 1077
Tru9I TTAA 4 cut(s) 95, 234, 792, 1077
TscAI CASTG 4 cut(s) 160, 751, 921, 1108
TseFI GTSAC 2 cut(s) 839, 1016
TseI GCWGC 1 cut(s) 567
Tsp45I GTSAC 2 cut(s) 839, 1016
TspDTI ATGAA 7 cut(s) 123, 190, 240, 534, 860, 1300, 1399
TspGWI ACGGA 2 cut(s) 1119, 1209
TspRI CASTG 4 cut(s) 160, 751, 921, 1108
VpaK11BI GGWCC 2 cut(s) 787, 1240
XapI RAATTY 4 cut(s) 770, 859, 1139, 1307
XspI CTAG 3 cut(s) 12, 696, 812
Zsp2I ATGCAT 1 cut(s) 578
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.