AT1G51620

protein serine/threonine kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0027114
Physical Location & Seq
Forward (+)
19140130 .. 19141926
1797 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G51620.2

Sequence Viewer

Length: 789 bp
ATGCTAAACCGAGCTTCCATCTACAATATTGTACAGTTTACCAAAGAGGTTCACGACTTTGTAAAAGTTCGTCACAAAAACTTGGTGAGCCTCATTGGATATTGCGATGATGGTGAGCACTTGGCCCTAATCTACGAATTCGTGGCAAATGGTGACTTGAATGATCAACTATCTGGGAAGTTTGGTAATGTCCCGAGCTGGGAAACCAGGTTGAAAATCATCATAGGAGTAGCACAAGGTCTGGAGTATTTGCATAGCGAGTTGCGAATCCTTCACCGATATGTTAAGCCGACAAATATCCTACTAGGCGAAAACTTTGAAGCGAAACTGGCTGATTTCGGGCTGTCTAGATCCTCTCCAACCAACCCTGACATACAAGCGTCAAATAAGATTTATGTCAAGCCTGGAAGAGATCCATATCTGCATCACCAATACTTCAACTCGAACCGGTTAAACCAAACGAGCGACATTTATAGCTTTGGCATTGTTATGTTGGAGATGATAACCAACCAGCCTGTAGTTGACAACAAGCGTGAGAGTCCTCACATTTCAAAGTGGGTCGATTTAAAGGTCGCGAAAGGCGATACTCTAGAGATTGTTGATCTCAGGCTAAACAATGACTTTGAGCGCGACTCGGTCAGGAAAGCTATGGATATAGCATGCAGTTGTGCAGCTCGTGCTCATAATAGGCCAAGCATGAGCCAGGTTGTTATAGAGCTCAATGAGTGTCTAGCCTTAGAGATGGCTCGAAGTAATGGAAGAACTGGGGAGACAACTCAGACTCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

262

Amino Acids

29.75

Weight (kDa)

6.51

Isoelectric Point (pI)

31.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 49 - 311 7.9e-39 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 53 - 311 2.9e-37 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0027114)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G51620 AT1G51620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 575, 630
AclWI GGATC 2 cut(s) 345, 407
AcsI RAATTY 1 cut(s) 137
AfaI GTAC 1 cut(s) 33
AfiI CCNNNNNNNGG 1 cut(s) 199
AgeI ACCGGT 1 cut(s) 447
AgsI TTSAA 5 cut(s) 160, 214, 320, 439, 552
AjnI CCWGG 3 cut(s) 206, 403, 702
AluBI AGCT 6 cut(s) 14, 198, 477, 647, 674, 718
AluI AGCT 6 cut(s) 14, 198, 477, 647, 674, 718
Alw21I GWGCWC 3 cut(s) 120, 682, 720
Alw26I GTCTC 1 cut(s) 764
AlwI GGATC 2 cut(s) 345, 407
Ama87I CYCGRG 1 cut(s) 193
AoxI GGCC 2 cut(s) 123, 689
ApeKI GCWGC 1 cut(s) 671
ApoI RAATTY 1 cut(s) 137
AsiGI ACCGGT 1 cut(s) 447
AspLEI GCGC 1 cut(s) 630
AspS9I GGNCC 1 cut(s) 124
AsuHPI GGTGA 5 cut(s) 97, 125, 164, 266, 419
AvaI CYCGRG 1 cut(s) 193
BanII GRGCYC 1 cut(s) 720
BauI CACGAG 1 cut(s) 675
Bbv12I GWGCWC 3 cut(s) 120, 682, 720
BbvI GCAGC 1 cut(s) 683
BccI CCATC 3 cut(s) 26, 104, 736
BciT130I CCWGG 3 cut(s) 208, 405, 704
BclI TGATCA 1 cut(s) 163
BcoDI GTCTC 1 cut(s) 764
BfaI CTAG 4 cut(s) 305, 348, 590, 731
BfmI CTRYAG 1 cut(s) 516
BisI GCNGC 1 cut(s) 672
BlsI GCNGC 1 cut(s) 673
Bme1390I CCNGG 3 cut(s) 208, 405, 704
BmeT110I CYCGRG 1 cut(s) 193
BmgT120I GGNCC 1 cut(s) 124
BmrFI CCNGG 3 cut(s) 208, 405, 704
BmrI ACTGGG 1 cut(s) 774
BmsI GCATC 1 cut(s) 433
BmuI ACTGGG 1 cut(s) 774
BplI GAGNNNNNCTC 2 cut(s) 617, 649
BpmI CTGGAG 1 cut(s) 263
BsaBI GATNNNNATC 1 cut(s) 417
BsaWI WCCGGW 1 cut(s) 447
Bsc4I CCNNNNNNNGG 1 cut(s) 199
Bse118I RCCGGY 1 cut(s) 447
Bse1I ACTGG 2 cut(s) 333, 769
Bse8I GATNNNNATC 1 cut(s) 417
BseBI CCWGG 3 cut(s) 208, 405, 704
BseJI GATNNNNATC 1 cut(s) 417
BseLI CCNNNNNNNGG 1 cut(s) 199
BseMII CTCAG 1 cut(s) 619
BseNI ACTGG 2 cut(s) 333, 769
BseXI GCAGC 1 cut(s) 683
BseYI CCCAGC 1 cut(s) 198
BsgI GTGCAG 1 cut(s) 690
Bsh1236I CGCG 2 cut(s) 575, 630
BshFI GGCC 2 cut(s) 125, 691
BshTI ACCGGT 1 cut(s) 447
BsiHKAI GWGCWC 3 cut(s) 120, 682, 720
BsiHKCI CYCGRG 1 cut(s) 193
BsiSI CCGG 1 cut(s) 448
BslFI GGGAC 1 cut(s) 176
BslI CCNNNNNNNGG 1 cut(s) 199
BsmAI GTCTC 1 cut(s) 764
BsmFI GGGAC 1 cut(s) 176
BsnI GGCC 2 cut(s) 125, 691
BsoBI CYCGRG 1 cut(s) 193
Bsp1286I GDGCHC 3 cut(s) 120, 682, 720
Bsp1407I TGTACA 1 cut(s) 31
Bsp143I GATC 4 cut(s) 163, 350, 412, 601
Bsp68I TCGCGA 1 cut(s) 575
BspANI GGCC 2 cut(s) 125, 691
BspCNI CTCAG 1 cut(s) 618
BspFNI CGCG 2 cut(s) 575, 630
BspPI GGATC 2 cut(s) 345, 407
BsrFI RCCGGY 1 cut(s) 447
BsrGI TGTACA 1 cut(s) 31
BsrI ACTGG 2 cut(s) 333, 769
BssAI RCCGGY 1 cut(s) 447
BssMI GATC 4 cut(s) 163, 350, 412, 601
BssSI CACGAG 1 cut(s) 675
Bst2BI CACGAG 1 cut(s) 675
Bst2UI CCWGG 3 cut(s) 208, 405, 704
Bst4CI ACNGT 1 cut(s) 36
Bst6I CTCTTC 1 cut(s) 403
BstAPI GCANNNNNTGC 1 cut(s) 677
BstAUI TGTACA 1 cut(s) 31
BstC8I GCNNGC 1 cut(s) 661
BstDEI CTNAG 4 cut(s) 605, 736, 777, 783
BstFNI CGCG 2 cut(s) 575, 630
BstHHI GCGC 1 cut(s) 630
BstKTI GATC 4 cut(s) 166, 353, 415, 604
BstMAI GTCTC 1 cut(s) 764
BstMBI GATC 4 cut(s) 163, 350, 412, 601
BstMWI GCNNNNNNNGC 2 cut(s) 329, 677
BstNI CCWGG 3 cut(s) 208, 405, 704
BstNSI RCATGY 1 cut(s) 663
BstSCI CCNGG 3 cut(s) 206, 403, 702
BstSFI CTRYAG 1 cut(s) 516
BstUI CGCG 2 cut(s) 575, 630
BstV1I GCAGC 1 cut(s) 683
BstX2I RGATCY 2 cut(s) 350, 412
BstYI RGATCY 2 cut(s) 350, 412
BsuRI GGCC 2 cut(s) 125, 691
BtgZI GCGATG 1 cut(s) 120
BtuMI TCGCGA 1 cut(s) 575
Cac8I GCNNGC 1 cut(s) 661
CfoI GCGC 1 cut(s) 630
Cfr10I RCCGGY 1 cut(s) 447
Cfr13I GGNCC 1 cut(s) 124
CseI GACGC 1 cut(s) 369
CsiI ACCWGGT 1 cut(s) 206
Csp6I GTAC 1 cut(s) 32
CspAI ACCGGT 1 cut(s) 447
CviAII CATG 2 cut(s) 660, 697
CviQI GTAC 1 cut(s) 32
DdeI CTNAG 4 cut(s) 605, 736, 777, 783
DpnI GATC 4 cut(s) 165, 352, 414, 603
DpnII GATC 4 cut(s) 163, 350, 412, 601
DraI TTTAAA 1 cut(s) 567
Eam1104I CTCTTC 1 cut(s) 403
EarI CTCTTC 1 cut(s) 403
Ecl136II GAGCTC 1 cut(s) 718
Eco24I GRGCYC 1 cut(s) 720
Eco53kI GAGCTC 1 cut(s) 718
Eco88I CYCGRG 1 cut(s) 193
EcoICRI GAGCTC 1 cut(s) 718
EcoRI GAATTC 1 cut(s) 137
EcoRII CCWGG 3 cut(s) 206, 403, 702
EcoT38I GRGCYC 1 cut(s) 720
FaeI CATG 2 cut(s) 663, 700
FaqI GGGAC 1 cut(s) 176
FatI CATG 2 cut(s) 659, 696
FbaI TGATCA 1 cut(s) 163
Fnu4HI GCNGC 1 cut(s) 672
FriOI GRGCYC 1 cut(s) 720
Fsp4HI GCNGC 1 cut(s) 672
FspBI CTAG 4 cut(s) 305, 348, 590, 731
GlaI GCGC 1 cut(s) 629
GluI GCNGC 1 cut(s) 672
GsaI CCCAGC 1 cut(s) 202
GsuI CTGGAG 1 cut(s) 263
HaeIII GGCC 2 cut(s) 125, 691
HapII CCGG 1 cut(s) 448
HgaI GACGC 1 cut(s) 369
HhaI GCGC 1 cut(s) 630
Hin1II CATG 2 cut(s) 663, 700
Hin6I GCGC 1 cut(s) 628
HinP1I GCGC 1 cut(s) 628
HincII GTYRAC 1 cut(s) 523
HindII GTYRAC 1 cut(s) 523
HinfI GANTC 4 cut(s) 267, 538, 632, 781
HpaII CCGG 1 cut(s) 448
HphI GGTGA 5 cut(s) 97, 125, 164, 266, 419
Hpy166II GTNNAC 3 cut(s) 39, 52, 523
Hpy188I TCNGA 1 cut(s) 780
Hpy188III TCNNGA 7 cut(s) 53, 193, 242, 348, 574, 590, 640
Hpy8I GTNNAC 3 cut(s) 39, 52, 523
HpyAV CCTTC 1 cut(s) 281
HpyCH4III ACNGT 1 cut(s) 36
HpyCH4V TGCA 4 cut(s) 253, 424, 663, 671
HpyF10VI GCNNNNNNNGC 2 cut(s) 329, 677
HpyF3I CTNAG 4 cut(s) 605, 736, 777, 783
Hsp92II CATG 2 cut(s) 663, 700
HspAI GCGC 1 cut(s) 628
Ksp22I TGATCA 1 cut(s) 163
Kzo9I GATC 4 cut(s) 163, 350, 412, 601
Lsp1109I GCAGC 1 cut(s) 683
LweI GCATC 1 cut(s) 433
MabI ACCWGGT 1 cut(s) 206
MaeI CTAG 4 cut(s) 305, 348, 590, 731
MaeIII GTNAC 2 cut(s) 71, 152
MalI GATC 4 cut(s) 165, 352, 414, 603
MboI GATC 4 cut(s) 163, 350, 412, 601
MboII GAAGA 2 cut(s) 420, 771
MflI RGATCY 2 cut(s) 350, 412
MhlI GDGCHC 3 cut(s) 120, 682, 720
MluCI AATT 1 cut(s) 137
MlyI GAGTC 3 cut(s) 547, 626, 775
MmeI TCCRAC 2 cut(s) 383, 474
MnlI CCTC 4 cut(s) 40, 101, 364, 552
MseI TTAA 3 cut(s) 285, 452, 566
MslI CAYNNNNRTG 2 cut(s) 279, 488
MspI CCGG 1 cut(s) 448
MspR9I CCNGG 3 cut(s) 208, 405, 704
MvaI CCWGG 3 cut(s) 208, 405, 704
MvnI CGCG 2 cut(s) 575, 630
MwoI GCNNNNNNNGC 2 cut(s) 329, 677
NdeII GATC 4 cut(s) 163, 350, 412, 601
NlaIII CATG 2 cut(s) 663, 700
NmuCI GTSAC 2 cut(s) 71, 152
NruI TCGCGA 1 cut(s) 575
NspI RCATGY 1 cut(s) 663
PaeI GCATGC 1 cut(s) 663
PcsI WCGNNNNNNNCGW 1 cut(s) 579
PfeI GAWTC 1 cut(s) 267
PflFI GACNNNGTC 1 cut(s) 635
PinAI ACCGGT 1 cut(s) 447
PkrI GCNGC 1 cut(s) 673
PleI GAGTC 3 cut(s) 546, 626, 775
PpsI GAGTC 3 cut(s) 546, 626, 775
Psp124BI GAGCTC 1 cut(s) 720
Psp6I CCWGG 3 cut(s) 206, 403, 702
PspFI CCCAGC 1 cut(s) 198
PspGI CCWGG 3 cut(s) 206, 403, 702
PspPI GGNCC 1 cut(s) 124
PsuI RGATCY 2 cut(s) 350, 412
PsyI GACNNNGTC 1 cut(s) 635
RruI TCGCGA 1 cut(s) 575
RsaI GTAC 1 cut(s) 33
RsaNI GTAC 1 cut(s) 32
RseI CAYNNNNRTG 2 cut(s) 279, 488
SacI GAGCTC 1 cut(s) 720
SaqAI TTAA 3 cut(s) 285, 452, 566
SatI GCNGC 1 cut(s) 672
Sau3AI GATC 4 cut(s) 163, 350, 412, 601
Sau96I GGNCC 1 cut(s) 124
SchI GAGTC 3 cut(s) 547, 626, 775
ScrFI CCNGG 3 cut(s) 208, 405, 704
SduI GDGCHC 3 cut(s) 120, 682, 720
SexAI ACCWGGT 1 cut(s) 206
SfaNI GCATC 1 cut(s) 433
SfcI CTRYAG 1 cut(s) 516
SmiMI CAYNNNNRTG 2 cut(s) 279, 488
SphI GCATGC 1 cut(s) 663
Sse9I AATT 1 cut(s) 137
SspI AATATT 1 cut(s) 28
SspMI CTAG 4 cut(s) 305, 348, 590, 731
SstI GAGCTC 1 cut(s) 720
StyD4I CCNGG 3 cut(s) 206, 403, 702
TaaI ACNGT 1 cut(s) 36
TaqI TCGA 3 cut(s) 443, 561, 748
TaqII GACCGA 1 cut(s) 625
TasI AATT 1 cut(s) 137
TatI WGTACW 1 cut(s) 31
TfiI GAWTC 1 cut(s) 267
Tru1I TTAA 3 cut(s) 285, 452, 566
Tru9I TTAA 3 cut(s) 285, 452, 566
TseFI GTSAC 2 cut(s) 71, 152
TseI GCWGC 1 cut(s) 671
Tsp45I GTSAC 2 cut(s) 71, 152
Tth111I GACNNNGTC 1 cut(s) 635
XapI RAATTY 1 cut(s) 137
XbaI TCTAGA 2 cut(s) 347, 589
XceI RCATGY 1 cut(s) 663
XspI CTAG 4 cut(s) 305, 348, 590, 731
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.