AT1G63710

cytochrome P450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0014947
Physical Location & Seq
Reverse (-)
23632178 .. 23634073
1896 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G63710.1

Sequence Viewer

Length: 1572 bp
ATGGATGGATCAACGGCTGCGATCATCCTTACCCTCATCGTAACCTACATTATATGGTTCGTTTCTTTACGTCGTTCATATAAAGGTCCACGTGTCTGGCCCTTAGTGGGCAGTCTTCCAGCACTCATAACAAATGCTCACCGCATGCACGACTTCATCGCCGATAACCTCCGCATGTGCGGCGGTACGTACCAAACGTGCATATTCCCGATCCCGTTCTTGGCTAAGAAACAAGGTCACGTGACTGTCACGTGTGACCCAAAGAATCTGGAGCATATCTTGAAGACCCGGTTCGATAATTACCCCAAGGGTCCTAGCTGGCAATCAGTCTTCCACGATCTGTTAGGAGATGGGATCTTTAATTCAGATGGTGACACATGGCGGTTTCAACGTAAGACCGCTGCATTGGAGTTCACTACACGTACCCTTCGCCAAGCCATGGCTCGTTGGGTTGATCGAGCCATCAAGAACCGTCTCGTGCCGATTCTTGAATCAGCTAGGAGTCGAGCCGAGCCGATTGATCTTCAAGATGTTCTTTTACGGCTCACTTTCGATAACATTTGCGGCTTAACATTTGGTAAAGATCCACGGACACTCTCGCCGGAGTTTCCTGAGAACGGATTCGCGGTGGCTTTTGATGGAGCCACCGAAGCCACTCTTCAACGGTTTATCATGCCTGAGTTTATTTGGAAGATCAGAAAATGGCTTCGGCTCGGCTTGGAAGATGATATGAGCCGAAGCATCAGCCACGTGGATAATTACTTATCAGAGATCATAAATACACGTAAGCTCGAATTGCTAGGTCAGCAACAAGATGAATCCCGCCATGATGATCTATTGTCACGGTTCATGAAGAAAAAAGAATCCTACTCGGATAAATATCTTAAATACGTGGCGTTAAATTTCATCCTAGCTGGACGTGACACGTCATCGGTTGCTATGAGTTGGTTCTTCTGGTTGGTTAGTCTTAACCCACGAGTCGAAGAAAAAATCATAAACGAGATCTGCACCATTCTGATCAAGACACGTGACACCAATGTGTCGAAGTGGACCGACGAGCCGTTGACTTTCGATGAAATTGACCAGTTGGTCTACTTAAAAGCGGCATTGTCCGAAACATTGAGGCTATATCCATCGGTACCAGAAGATTCAAAATTTGTTGTTGCCAACGATGTTTTACCTGACGGGACATTTGTTCCATCGGGATCAAACGTTACATATTCGATATATTCGGTTGGGCGTATGAAATTCATTTGGGGTGAAGATTGTCTCGAGTTTAAACCGGAAAGATGGTTAGAGGAAAGCCGGGACGAAAAATGTAACCAATACAAATTCGTAGCGTTCAATGCCGGTCCACGGATTTGTCTAGGCAAAGACTTGGCTTATTTGCAGATGAAATCAATTACTGCTTCGATTTTGCTCCGGCATCGGCTTACGGTGGCTCCGGGACATCGAGTGGAGCAGAAGATGTCATTGACGTTGTTCATGAAGTTTGGTCTTAAAATGGATGTGCATAAAAGGGATTTGACGTTGCCGGTGGAGAAAGTGGTTAATGAGATGAGGAAAAAGTGA

Protein Analysis

523

Amino Acids

60.35

Weight (kDa)

8.89

Isoelectric Point (pI)

47.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 28 - 493 5.8e-70 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014947)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G63710
fragaria_vesca FvH4_5g02700
malus_domestica MD06G1086100.v1.1 MD14G1107200.v1.1
prunus_persica Prupe.5G102600_v2.0.a1
pyrus_communis pycom06g08240 pycom14g10210
rosa_chinensis RchiOBHm_Chr7g0197251
rosa_laevigata RLG00000003947
rosa_multiflora Rmu_sc0010019.1_g000008
rosa_roxburghii Rroxscaffold_3G00258520
rosa_rugosa Rorug07G0039100
rosa_samantha Rh7AG164000 Rh7CG172500 Rh7DG165100
rosa_wichuraiana Rw7G014290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1088
Acc65I GGTACC 1 cut(s) 1138
AccB1I GGYRCC 1 cut(s) 1138
AccB7I CCANNNNNTGG 1 cut(s) 439
AccI GTMKAC 1 cut(s) 1092
AccII CGCG 1 cut(s) 626
AclI AACGTT 1 cut(s) 1212
AclWI GGATC 5 cut(s) 16, 205, 362, 578, 1213
AcsI RAATTY 4 cut(s) 901, 1154, 1247, 1331
AcvI CACGTG 5 cut(s) 92, 241, 252, 751, 1028
AfaI GTAC 4 cut(s) 187, 191, 424, 1140
AfiI CCNNNNNNNGG 5 cut(s) 107, 220, 439, 617, 1356
AflIII ACRYGT 6 cut(s) 91, 251, 419, 782, 924, 1025
AgsI TTSAA 7 cut(s) 283, 389, 491, 527, 662, 1152, 1345
AjiI CACGTC 2 cut(s) 920, 927
AleI CACNNNNGTG 1 cut(s) 1037
AluBI AGCT 4 cut(s) 318, 497, 790, 914
AluI AGCT 4 cut(s) 318, 497, 790, 914
Alw26I GTCTC 2 cut(s) 479, 1274
AlwI GGATC 5 cut(s) 16, 205, 362, 578, 1213
Ama87I CYCGRG 1 cut(s) 1271
AoxI GGCC 1 cut(s) 98
ApeKI GCWGC 2 cut(s) 17, 401
ApoI RAATTY 4 cut(s) 901, 1154, 1247, 1331
ArsI GACNNNNNNTTYG 2 cut(s) 1175, 1207
Asp700I GAANNNNTTC 1 cut(s) 620
Asp718I GGTACC 1 cut(s) 1138
AspS9I GGNCC 5 cut(s) 86, 99, 311, 1050, 1352
AsuC2I CCSGG 3 cut(s) 289, 1307, 1446
AsuHPI GGTGA 3 cut(s) 131, 383, 1271
AvaI CYCGRG 1 cut(s) 1271
AvaII GGWCC 4 cut(s) 86, 311, 1050, 1352
BanI GGYRCC 1 cut(s) 1138
BauI CACGAG 2 cut(s) 476, 975
BbrPI CACGTG 5 cut(s) 92, 241, 252, 751, 1028
BbsI GAAGAC 3 cut(s) 107, 290, 322
BbvI GCAGC 2 cut(s) 4, 388
BccI CCATC 7 cut(s) 344, 362, 470, 632, 1141, 1207, 1284
BceAI ACGGC 3 cut(s) 30, 557, 1045
BclI TGATCA 1 cut(s) 1017
BcnI CCSGG 3 cut(s) 289, 1307, 1446
BcoDI GTCTC 2 cut(s) 479, 1274
BfaI CTAG 5 cut(s) 315, 498, 800, 911, 1367
BglII AGATCT 1 cut(s) 1002
BisI GCNGC 5 cut(s) 18, 181, 402, 565, 1104
BlsI GCNGC 5 cut(s) 19, 182, 403, 566, 1105
Bme1390I CCNGG 3 cut(s) 289, 1307, 1446
Bme18I GGWCC 4 cut(s) 86, 311, 1050, 1352
BmeT110I CYCGRG 1 cut(s) 1271
BmgBI CACGTC 2 cut(s) 920, 927
BmgT120I GGNCC 5 cut(s) 86, 99, 311, 1050, 1352
BmiI GGNNCC 4 cut(s) 312, 643, 1140, 1443
BmrFI CCNGG 3 cut(s) 289, 1307, 1446
BmsI GCATC 2 cut(s) 750, 1435
BpiI GAAGAC 3 cut(s) 107, 290, 322
BpmI CTGGAG 1 cut(s) 290
BpuMI CCSGG 3 cut(s) 289, 1307, 1446
BsaAI YACGTR 9 cut(s) 92, 189, 241, 252, 422, 751, 785, 892, 1028
BsaBI GATNNNNATC 1 cut(s) 879
BsaJI CCNNGG 4 cut(s) 306, 438, 587, 1355
BsaWI WCCGGW 1 cut(s) 1282
BsaXI ACNNNNNCTCC 2 cut(s) 1426, 1456
Bsc4I CCNNNNNNNGG 5 cut(s) 107, 220, 439, 617, 1356
Bse118I RCCGGY 2 cut(s) 1349, 1534
Bse1I ACTGG 1 cut(s) 1084
Bse8I GATNNNNATC 1 cut(s) 879
BseDI CCNNGG 4 cut(s) 306, 438, 587, 1355
BseGI GGATG 4 cut(s) 10, 24, 906, 1513
BseJI GATNNNNATC 1 cut(s) 879
BseLI CCNNNNNNNGG 5 cut(s) 107, 220, 439, 617, 1356
BseMII CTCAG 2 cut(s) 603, 669
BseNI ACTGG 1 cut(s) 1084
BseXI GCAGC 2 cut(s) 4, 388
BsgI GTGCAG 1 cut(s) 991
Bsh1236I CGCG 1 cut(s) 626
BshFI GGCC 1 cut(s) 100
BshNI GGYRCC 1 cut(s) 1138
BsiHKCI CYCGRG 1 cut(s) 1271
BsiSI CCGG 8 cut(s) 289, 602, 1283, 1306, 1350, 1423, 1445, 1535
BslFI GGGAC 3 cut(s) 1201, 1322, 1461
BslI CCNNNNNNNGG 5 cut(s) 107, 220, 439, 617, 1356
BsmAI GTCTC 2 cut(s) 479, 1274
BsmBI CGTCTC 1 cut(s) 479
BsmFI GGGAC 3 cut(s) 1201, 1322, 1461
BsnI GGCC 1 cut(s) 100
BsoBI CYCGRG 1 cut(s) 1271
Bsp19I CCATGG 1 cut(s) 438
BspANI GGCC 1 cut(s) 100
BspCNI CTCAG 2 cut(s) 604, 670
BspFNI CGCG 1 cut(s) 626
BspHI TCATGA 2 cut(s) 849, 1485
BspLI GGNNCC 4 cut(s) 312, 643, 1140, 1443
BspPI GGATC 5 cut(s) 16, 205, 362, 578, 1213
BspT107I GGYRCC 1 cut(s) 1138
BsrFI RCCGGY 2 cut(s) 1349, 1534
BsrI ACTGG 1 cut(s) 1084
BssAI RCCGGY 2 cut(s) 1349, 1534
BssECI CCNNGG 4 cut(s) 306, 438, 587, 1355
BssSI CACGAG 2 cut(s) 476, 975
BssT1I CCWWGG 2 cut(s) 306, 438
Bst2BI CACGAG 2 cut(s) 476, 975
Bst4CI ACNGT 5 cut(s) 247, 473, 666, 846, 1438
Bst6I CTCTTC 1 cut(s) 663
BstBAI YACGTR 9 cut(s) 92, 189, 241, 252, 422, 751, 785, 892, 1028
BstC8I GCNNGC 2 cut(s) 146, 320
BstDEI CTNAG 4 cut(s) 103, 225, 612, 678
BstDSI CCRYGG 3 cut(s) 438, 587, 1355
BstF5I GGATG 4 cut(s) 10, 24, 906, 1513
BstFNI CGCG 1 cut(s) 626
BstMAI GTCTC 2 cut(s) 479, 1274
BstMWI GCNNNNNNNGC 5 cut(s) 180, 650, 796, 805, 1346
BstNSI RCATGY 2 cut(s) 148, 178
BstSCI CCNGG 3 cut(s) 287, 1305, 1444
BstSNI TACGTA 1 cut(s) 189
BstUI CGCG 1 cut(s) 626
BstV1I GCAGC 2 cut(s) 4, 388
BstV2I GAAGAC 3 cut(s) 107, 290, 322
BstX2I RGATCY 3 cut(s) 354, 583, 1002
BstXI CCANNNNNNTGG 1 cut(s) 96
BstYI RGATCY 3 cut(s) 354, 583, 1002
BsuRI GGCC 1 cut(s) 100
BtgI CCRYGG 3 cut(s) 438, 587, 1355
BtgZI GCGATG 1 cut(s) 142
BtrI CACGTC 2 cut(s) 920, 927
BtsCI GGATG 4 cut(s) 10, 24, 906, 1513
Cac8I GCNNGC 2 cut(s) 146, 320
CciI TCATGA 2 cut(s) 849, 1485
Cfr10I RCCGGY 2 cut(s) 1349, 1534
Cfr13I GGNCC 5 cut(s) 86, 99, 311, 1050, 1352
Csp6I GTAC 4 cut(s) 186, 190, 423, 1139
CviAII CATG 8 cut(s) 145, 175, 378, 439, 673, 827, 850, 1486
CviQI GTAC 4 cut(s) 186, 190, 423, 1139
DdeI CTNAG 4 cut(s) 103, 225, 612, 678
DraI TTTAAA 1 cut(s) 1279
DrdI GACNNNNNNGTC 1 cut(s) 1088
DseDI GACNNNNNNGTC 1 cut(s) 1088
Eam1104I CTCTTC 1 cut(s) 663
EarI CTCTTC 1 cut(s) 663
Eco105I TACGTA 1 cut(s) 189
Eco130I CCWWGG 2 cut(s) 306, 438
Eco47I GGWCC 4 cut(s) 86, 311, 1050, 1352
Eco72I CACGTG 5 cut(s) 92, 241, 252, 751, 1028
Eco88I CYCGRG 1 cut(s) 1271
EcoO109I RGGNCCY 1 cut(s) 311
EcoT14I CCWWGG 2 cut(s) 306, 438
ErhI CCWWGG 2 cut(s) 306, 438
Esp3I CGTCTC 1 cut(s) 479
FaeI CATG 8 cut(s) 148, 178, 381, 442, 676, 830, 853, 1489
FalI AAGNNNNNCTT 4 cut(s) 519, 551, 642, 674
FaqI GGGAC 3 cut(s) 1201, 1322, 1461
FatI CATG 8 cut(s) 144, 174, 377, 438, 672, 826, 849, 1485
FauI CCCGC 1 cut(s) 830
FbaI TGATCA 1 cut(s) 1017
FblI GTMKAC 1 cut(s) 1092
Fnu4HI GCNGC 5 cut(s) 18, 181, 402, 565, 1104
FokI GGATG 4 cut(s) 11, 17, 893, 1520
Fsp4HI GCNGC 5 cut(s) 18, 181, 402, 565, 1104
FspBI CTAG 5 cut(s) 315, 498, 800, 911, 1367
GluI GCNGC 5 cut(s) 18, 181, 402, 565, 1104
GsuI CTGGAG 1 cut(s) 290
HaeIII GGCC 1 cut(s) 100
HapII CCGG 8 cut(s) 289, 602, 1283, 1306, 1350, 1423, 1445, 1535
Hin1II CATG 8 cut(s) 148, 178, 381, 442, 676, 830, 853, 1489
HincII GTYRAC 1 cut(s) 1065
HindII GTYRAC 1 cut(s) 1065
HinfI GANTC 9 cut(s) 265, 484, 491, 502, 621, 818, 863, 978, 1148
HpaII CCGG 8 cut(s) 289, 602, 1283, 1306, 1350, 1423, 1445, 1535
HphI GGTGA 3 cut(s) 131, 383, 1271
Hpy166II GTNNAC 6 cut(s) 89, 414, 1050, 1065, 1093, 1355
Hpy188I TCNGA 6 cut(s) 367, 698, 769, 874, 1017, 1114
Hpy8I GTNNAC 6 cut(s) 89, 414, 1050, 1065, 1093, 1355
Hpy99I CGWCG 2 cut(s) 75, 1058
HpyAV CCTTC 1 cut(s) 437
HpyCH4III ACNGT 5 cut(s) 247, 473, 666, 846, 1438
HpyCH4V TGCA 6 cut(s) 148, 201, 404, 1008, 1390, 1513
HpyF10VI GCNNNNNNNGC 5 cut(s) 180, 650, 796, 805, 1346
HpyF3I CTNAG 4 cut(s) 103, 225, 612, 678
Hsp92II CATG 8 cut(s) 148, 178, 381, 442, 676, 830, 853, 1489
KpnI GGTACC 1 cut(s) 1142
Ksp22I TGATCA 1 cut(s) 1017
LmnI GCTCC 5 cut(s) 271, 641, 1425, 1447, 1459
Lsp1109I GCAGC 2 cut(s) 4, 388
LweI GCATC 2 cut(s) 750, 1435
MaeI CTAG 5 cut(s) 315, 498, 800, 911, 1367
MflI RGATCY 3 cut(s) 354, 583, 1002
MlyI GAGTC 2 cut(s) 511, 987
MnlI CCTC 5 cut(s) 44, 179, 1116, 1291, 1554
MroXI GAANNNNTTC 1 cut(s) 620
MseI TTAA 9 cut(s) 360, 569, 885, 899, 969, 1097, 1278, 1500, 1551
MslI CAYNNNNRTG 1 cut(s) 1037
MspA1I CMGCKG 1 cut(s) 401
MspI CCGG 8 cut(s) 289, 602, 1283, 1306, 1350, 1423, 1445, 1535
MspR9I CCNGG 3 cut(s) 289, 1307, 1446
MssI GTTTAAAC 1 cut(s) 1279
MvnI CGCG 1 cut(s) 626
MwoI GCNNNNNNNGC 5 cut(s) 180, 650, 796, 805, 1346
NciI CCSGG 3 cut(s) 289, 1307, 1446
NcoI CCATGG 1 cut(s) 438
NlaIII CATG 8 cut(s) 148, 178, 381, 442, 676, 830, 853, 1489
NlaIV GGNNCC 4 cut(s) 312, 643, 1140, 1443
NmeAIII GCCGAG 2 cut(s) 535, 693
NmuCI GTSAC 8 cut(s) 236, 241, 247, 254, 371, 840, 920, 1028
NspI RCATGY 2 cut(s) 148, 178
OliI CACNNNNGTG 1 cut(s) 1037
PaeI GCATGC 1 cut(s) 148
PaeR7I CTCGAG 1 cut(s) 1271
PagI TCATGA 2 cut(s) 849, 1485
PcsI WCGNNNNNNNCGW 1 cut(s) 194
PdmI GAANNNNTTC 1 cut(s) 620
PfeI GAWTC 7 cut(s) 265, 484, 491, 621, 818, 863, 1148
PflMI CCANNNNNTGG 1 cut(s) 439
PfoI TCCNGGA 1 cut(s) 1444
PkrI GCNGC 5 cut(s) 19, 182, 403, 566, 1105
PleI GAGTC 2 cut(s) 510, 986
PmaCI CACGTG 5 cut(s) 92, 241, 252, 751, 1028
PmeI GTTTAAAC 1 cut(s) 1279
PmlI CACGTG 5 cut(s) 92, 241, 252, 751, 1028
PpsI GAGTC 2 cut(s) 510, 986
Ppu21I YACGTR 9 cut(s) 92, 189, 241, 252, 422, 751, 785, 892, 1028
PpuMI RGGWCCY 1 cut(s) 311
Psp1406I AACGTT 1 cut(s) 1212
Psp5II RGGWCCY 1 cut(s) 311
PspCI CACGTG 5 cut(s) 92, 241, 252, 751, 1028
PspN4I GGNNCC 4 cut(s) 312, 643, 1140, 1443
PspPI GGNCC 5 cut(s) 86, 99, 311, 1050, 1352
PspPPI RGGWCCY 1 cut(s) 311
PsuI RGATCY 3 cut(s) 354, 583, 1002
RsaI GTAC 4 cut(s) 187, 191, 424, 1140
RsaNI GTAC 4 cut(s) 186, 190, 423, 1139
RseI CAYNNNNRTG 1 cut(s) 1037
SaqAI TTAA 9 cut(s) 360, 569, 885, 899, 969, 1097, 1278, 1500, 1551
SatI GCNGC 5 cut(s) 18, 181, 402, 565, 1104
Sau96I GGNCC 5 cut(s) 86, 99, 311, 1050, 1352
SchI GAGTC 2 cut(s) 511, 987
ScrFI CCNGG 3 cut(s) 289, 1307, 1446
SfaNI GCATC 2 cut(s) 750, 1435
Sfr274I CTCGAG 1 cut(s) 1271
SinI GGWCC 4 cut(s) 86, 311, 1050, 1352
SlaI CTCGAG 1 cut(s) 1271
SmiMI CAYNNNNRTG 1 cut(s) 1037
SmlI CTYRAG 1 cut(s) 1271
SmoI CTYRAG 1 cut(s) 1271
SnaBI TACGTA 1 cut(s) 189
SphI GCATGC 1 cut(s) 148
SspMI CTAG 5 cut(s) 315, 498, 800, 911, 1367
StyD4I CCNGG 3 cut(s) 287, 1305, 1444
StyI CCWWGG 2 cut(s) 306, 438
TaaI ACNGT 5 cut(s) 247, 473, 666, 846, 1438
TaqII GACCGA 1 cut(s) 1067
TauI GCSGC 3 cut(s) 183, 567, 1106
TfiI GAWTC 7 cut(s) 265, 484, 491, 621, 818, 863, 1148
Tru1I TTAA 9 cut(s) 360, 569, 885, 899, 969, 1097, 1278, 1500, 1551
Tru9I TTAA 9 cut(s) 360, 569, 885, 899, 969, 1097, 1278, 1500, 1551
TseFI GTSAC 8 cut(s) 236, 241, 247, 254, 371, 840, 920, 1028
TseI GCWGC 2 cut(s) 17, 401
Tsp45I GTSAC 8 cut(s) 236, 241, 247, 254, 371, 840, 920, 1028
TspGWI ACGGA 3 cut(s) 604, 633, 1372
Van91I CCANNNNNTGG 1 cut(s) 439
VpaK11BI GGWCC 4 cut(s) 86, 311, 1050, 1352
XapI RAATTY 4 cut(s) 901, 1154, 1247, 1331
XceI RCATGY 2 cut(s) 148, 178
XhoI CTCGAG 1 cut(s) 1271
XmiI GTMKAC 1 cut(s) 1092
XmnI GAANNNNTTC 1 cut(s) 620
XspI CTAG 5 cut(s) 315, 498, 800, 911, 1367
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.