wall-associated receptor kinase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| GUB_WAK_bind | PF13947 | 27 - 77 | 3.8e-09 | Wall-associated receptor kinase galacturonan-binding |
| WAK | PF08488 | 188 - 265 | 3.6e-33 | Wall-associated kinase |
| Pkinase | PF00069 | 434 - 700 | 2.2e-49 | Protein kinase domain |
| PK_Tyr_Ser-Thr | PF07714 | 435 - 704 | 1.5e-48 | Protein tyrosine and serine/threonine kinase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 5 cut(s) | 452, 1359, 1398, 1515, 1685 |
| AccII | CGCG | 1 cut(s) | 2278 |
| AciI | CCGC | 9 cut(s) | 315, 389, 606, 1041, 1877, 2037, 2235, 2238, 2278 |
| AclWI | GGATC | 5 cut(s) | 337, 721, 1767, 1802, 1815 |
| AcsI | RAATTY | 3 cut(s) | 1142, 1181, 1520 |
| AcuI | CTGAAG | 2 cut(s) | 1254, 2154 |
| AcyI | GRCGYC | 1 cut(s) | 410 |
| AfeI | AGCGCT | 1 cut(s) | 1629 |
| AflIII | ACRYGT | 3 cut(s) | 89, 911, 1049 |
| AgsI | TTSAA | 6 cut(s) | 297, 1264, 1743, 2020, 2062, 2291 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1681 |
| AhlI | ACTAGT | 1 cut(s) | 1094 |
| AjnI | CCWGG | 1 cut(s) | 952 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1961, 1993 |
| AluBI | AGCT | 8 cut(s) | 6, 75, 293, 570, 1302, 1411, 1860, 1882 |
| AluI | AGCT | 8 cut(s) | 6, 75, 293, 570, 1302, 1411, 1860, 1882 |
| Alw21I | GWGCWC | 1 cut(s) | 8 |
| Alw26I | GTCTC | 6 cut(s) | 38, 840, 1487, 1668, 1909, 2086 |
| AlwI | GGATC | 5 cut(s) | 337, 721, 1767, 1802, 1815 |
| Ama87I | CYCGRG | 2 cut(s) | 143, 494 |
| Aor51HI | AGCGCT | 1 cut(s) | 1629 |
| ApeKI | GCWGC | 7 cut(s) | 396, 459, 570, 588, 1649, 2033, 2143 |
| ApoI | RAATTY | 3 cut(s) | 1142, 1181, 1520 |
| AseI | ATTAAT | 1 cut(s) | 972 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1181, 1524 |
| AspLEI | GCGC | 2 cut(s) | 923, 1630 |
| AsuC2I | CCSGG | 1 cut(s) | 722 |
| AsuHPI | GGTGA | 2 cut(s) | 55, 1762 |
| AsuII | TTCGAA | 1 cut(s) | 933 |
| AsuNHI | GCTAGC | 3 cut(s) | 71, 1873, 2159 |
| AvaI | CYCGRG | 2 cut(s) | 143, 494 |
| BamHI | GGATCC | 1 cut(s) | 1807 |
| BanII | GRGCYC | 1 cut(s) | 8 |
| BbsI | GAAGAC | 3 cut(s) | 1159, 1410, 1592 |
| Bbv12I | GWGCWC | 1 cut(s) | 8 |
| BbvI | GCAGC | 7 cut(s) | 383, 471, 557, 575, 1636, 2045, 2155 |
| BccI | CCATC | 5 cut(s) | 203, 759, 989, 2000, 2098 |
| BceAI | ACGGC | 4 cut(s) | 423, 795, 1029, 2131 |
| BciT130I | CCWGG | 1 cut(s) | 954 |
| BclI | TGATCA | 1 cut(s) | 51 |
| BcnI | CCSGG | 1 cut(s) | 722 |
| BcoDI | GTCTC | 6 cut(s) | 38, 840, 1487, 1668, 1909, 2086 |
| BcuI | ACTAGT | 1 cut(s) | 1094 |
| BfmI | CTRYAG | 3 cut(s) | 897, 1611, 1776 |
| BfoI | RGCGCY | 1 cut(s) | 1631 |
| BisI | GCNGC | 9 cut(s) | 397, 460, 571, 589, 1650, 2034, 2037, 2144, 2238 |
| BlpI | GCTNAGC | 1 cut(s) | 1088 |
| BlsI | GCNGC | 9 cut(s) | 398, 461, 572, 590, 1651, 2035, 2038, 2145, 2239 |
| Bme1390I | CCNGG | 2 cut(s) | 722, 954 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1681 |
| BmeT110I | CYCGRG | 2 cut(s) | 143, 494 |
| BmiI | GGNNCC | 1 cut(s) | 1809 |
| BmrFI | CCNGG | 2 cut(s) | 722, 954 |
| BmrI | ACTGGG | 1 cut(s) | 998 |
| BmsI | GCATC | 9 cut(s) | 293, 434, 575, 656, 800, 1558, 1661, 1981, 2249 |
| BmtI | GCTAGC | 3 cut(s) | 75, 1877, 2163 |
| BmuI | ACTGGG | 1 cut(s) | 998 |
| BoxI | GACNNNNGTC | 2 cut(s) | 422, 1499 |
| BpiI | GAAGAC | 3 cut(s) | 1159, 1410, 1592 |
| BpmI | CTGGAG | 1 cut(s) | 1911 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1088 |
| Bpu14I | TTCGAA | 1 cut(s) | 933 |
| BpuEI | CTTGAG | 2 cut(s) | 292, 1252 |
| BpuMI | CCSGG | 1 cut(s) | 722 |
| Bsa29I | ATCGAT | 1 cut(s) | 2102 |
| BsaAI | YACGTR | 2 cut(s) | 1050, 2224 |
| BsaBI | GATNNNNATC | 1 cut(s) | 237 |
| BsaHI | GRCGYC | 1 cut(s) | 410 |
| BsaJI | CCNNGG | 4 cut(s) | 364, 660, 1755, 2303 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1961, 1991 |
| Bse118I | RCCGGY | 1 cut(s) | 243 |
| Bse1I | ACTGG | 4 cut(s) | 1004, 1136, 1822, 1894 |
| Bse3DI | GCAATG | 2 cut(s) | 1965, 2256 |
| Bse8I | GATNNNNATC | 1 cut(s) | 237 |
| BseBI | CCWGG | 1 cut(s) | 954 |
| BseCI | ATCGAT | 1 cut(s) | 2102 |
| BseDI | CCNNGG | 4 cut(s) | 364, 660, 1755, 2303 |
| BseGI | GGATG | 7 cut(s) | 105, 308, 449, 590, 671, 771, 815 |
| BseJI | GATNNNNATC | 1 cut(s) | 237 |
| BseMI | GCAATG | 2 cut(s) | 1965, 2256 |
| BseMII | CTCAG | 1 cut(s) | 1934 |
| BseNI | ACTGG | 4 cut(s) | 1004, 1136, 1822, 1894 |
| BseXI | GCAGC | 7 cut(s) | 383, 471, 557, 575, 1636, 2045, 2155 |
| BseYI | CCCAGC | 1 cut(s) | 1036 |
| Bsh1236I | CGCG | 1 cut(s) | 2278 |
| BshVI | ATCGAT | 1 cut(s) | 2102 |
| BsiHKAI | GWGCWC | 1 cut(s) | 8 |
| BsiHKCI | CYCGRG | 2 cut(s) | 143, 494 |
| BsiSI | CCGG | 2 cut(s) | 244, 722 |
| BslFI | GGGAC | 1 cut(s) | 1487 |
| BsmAI | GTCTC | 6 cut(s) | 38, 840, 1487, 1668, 1909, 2086 |
| BsmFI | GGGAC | 1 cut(s) | 1487 |
| BsmI | GAATGC | 3 cut(s) | 965, 983, 1356 |
| BsoBI | CYCGRG | 2 cut(s) | 143, 494 |
| Bsp119I | TTCGAA | 1 cut(s) | 933 |
| Bsp1286I | GDGCHC | 1 cut(s) | 8 |
| Bsp1407I | TGTACA | 1 cut(s) | 1341 |
| Bsp143I | GATC | 7 cut(s) | 51, 58, 329, 713, 1759, 1807, 1916 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1088 |
| BspACI | CCGC | 9 cut(s) | 315, 389, 606, 1041, 1877, 2037, 2235, 2238, 2278 |
| BspCNI | CTCAG | 1 cut(s) | 1933 |
| BspDI | ATCGAT | 1 cut(s) | 2102 |
| BspFNI | CGCG | 1 cut(s) | 2278 |
| BspHI | TCATGA | 1 cut(s) | 1555 |
| BspLI | GGNNCC | 1 cut(s) | 1809 |
| BspOI | GCTAGC | 3 cut(s) | 75, 1877, 2163 |
| BspPI | GGATC | 5 cut(s) | 337, 721, 1767, 1802, 1815 |
| BspT104I | TTCGAA | 1 cut(s) | 933 |
| BsrDI | GCAATG | 2 cut(s) | 1965, 2256 |
| BsrFI | RCCGGY | 1 cut(s) | 243 |
| BsrGI | TGTACA | 1 cut(s) | 1341 |
| BsrI | ACTGG | 4 cut(s) | 1004, 1136, 1822, 1894 |
| BssAI | RCCGGY | 1 cut(s) | 243 |
| BssECI | CCNNGG | 4 cut(s) | 364, 660, 1755, 2303 |
| BssMI | GATC | 7 cut(s) | 51, 58, 329, 713, 1759, 1807, 1916 |
| BssNI | GRCGYC | 1 cut(s) | 410 |
| BssT1I | CCWWGG | 2 cut(s) | 364, 660 |
| Bst2UI | CCWGG | 1 cut(s) | 954 |
| Bst6I | CTCTTC | 3 cut(s) | 41, 838, 1410 |
| BstACI | GRCGYC | 1 cut(s) | 410 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2045 |
| BstAUI | TGTACA | 1 cut(s) | 1341 |
| BstBAI | YACGTR | 2 cut(s) | 1050, 2224 |
| BstBI | TTCGAA | 1 cut(s) | 933 |
| BstC8I | GCNNGC | 5 cut(s) | 73, 606, 1018, 1875, 2161 |
| BstDEI | CTNAG | 5 cut(s) | 84, 761, 839, 1088, 1920 |
| BstDSI | CCRYGG | 1 cut(s) | 1755 |
| BstEII | GGTNACC | 3 cut(s) | 350, 1535, 1750 |
| BstF5I | GGATG | 7 cut(s) | 105, 308, 449, 590, 671, 771, 815 |
| BstFNI | CGCG | 1 cut(s) | 2278 |
| BstH2I | RGCGCY | 1 cut(s) | 1631 |
| BstHHI | GCGC | 2 cut(s) | 923, 1630 |
| BstKTI | GATC | 7 cut(s) | 54, 61, 332, 716, 1762, 1810, 1919 |
| BstMAI | GTCTC | 6 cut(s) | 38, 840, 1487, 1668, 1909, 2086 |
| BstMBI | GATC | 7 cut(s) | 51, 58, 329, 713, 1759, 1807, 1916 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 312, 987, 1879, 2045 |
| BstNI | CCWGG | 1 cut(s) | 954 |
| BstNSI | RCATGY | 2 cut(s) | 93, 915 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 422, 1499 |
| BstPI | GGTNACC | 3 cut(s) | 350, 1535, 1750 |
| BstSCI | CCNGG | 2 cut(s) | 720, 952 |
| BstSFI | CTRYAG | 3 cut(s) | 897, 1611, 1776 |
| BstUI | CGCG | 1 cut(s) | 2278 |
| BstV1I | GCAGC | 7 cut(s) | 383, 471, 557, 575, 1636, 2045, 2155 |
| BstV2I | GAAGAC | 3 cut(s) | 1159, 1410, 1592 |
| BstX2I | RGATCY | 2 cut(s) | 713, 1807 |
| BstYI | RGATCY | 2 cut(s) | 713, 1807 |
| Bsu15I | ATCGAT | 1 cut(s) | 2102 |
| BsuTUI | ATCGAT | 1 cut(s) | 2102 |
| BtgI | CCRYGG | 1 cut(s) | 1755 |
| BtsCI | GGATG | 7 cut(s) | 105, 308, 449, 590, 671, 771, 815 |
| BtsIMutI | CAGTG | 2 cut(s) | 1344, 1887 |
| Cac8I | GCNNGC | 5 cut(s) | 73, 606, 1018, 1875, 2161 |
| CciI | TCATGA | 1 cut(s) | 1555 |
| CfoI | GCGC | 2 cut(s) | 923, 1630 |
| Cfr10I | RCCGGY | 1 cut(s) | 243 |
| ClaI | ATCGAT | 1 cut(s) | 2102 |
| CseI | GACGC | 2 cut(s) | 399, 1586 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 420, 455 |
| CviAII | CATG | 5 cut(s) | 90, 734, 912, 918, 1556 |
| DdeI | CTNAG | 5 cut(s) | 84, 761, 839, 1088, 1920 |
| DpnI | GATC | 7 cut(s) | 53, 60, 331, 715, 1761, 1809, 1918 |
| DpnII | GATC | 7 cut(s) | 51, 58, 329, 713, 1759, 1807, 1916 |
| DraI | TTTAAA | 1 cut(s) | 339 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1681 |
| Eam1104I | CTCTTC | 3 cut(s) | 41, 838, 1410 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1681 |
| EarI | CTCTTC | 3 cut(s) | 41, 838, 1410 |
| EciI | GGCGGA | 1 cut(s) | 330 |
| Ecl136II | GAGCTC | 1 cut(s) | 6 |
| Eco130I | CCWWGG | 2 cut(s) | 364, 660 |
| Eco24I | GRGCYC | 1 cut(s) | 8 |
| Eco47III | AGCGCT | 1 cut(s) | 1629 |
| Eco53kI | GAGCTC | 1 cut(s) | 6 |
| Eco57I | CTGAAG | 2 cut(s) | 1254, 2154 |
| Eco88I | CYCGRG | 2 cut(s) | 143, 494 |
| Eco91I | GGTNACC | 3 cut(s) | 350, 1535, 1750 |
| EcoICRI | GAGCTC | 1 cut(s) | 6 |
| EcoO65I | GGTNACC | 3 cut(s) | 350, 1535, 1750 |
| EcoRI | GAATTC | 1 cut(s) | 1520 |
| EcoRII | CCWGG | 1 cut(s) | 952 |
| EcoT14I | CCWWGG | 2 cut(s) | 364, 660 |
| EcoT38I | GRGCYC | 1 cut(s) | 8 |
| ErhI | CCWWGG | 2 cut(s) | 364, 660 |
| FaeI | CATG | 5 cut(s) | 93, 737, 915, 921, 1559 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1169, 1201, 1584, 1616 |
| FaqI | GGGAC | 1 cut(s) | 1487 |
| FatI | CATG | 5 cut(s) | 89, 733, 911, 917, 1555 |
| FauI | CCCGC | 1 cut(s) | 613 |
| FbaI | TGATCA | 1 cut(s) | 51 |
| FblI | GTMKAC | 5 cut(s) | 452, 1359, 1398, 1515, 1685 |
| Fnu4HI | GCNGC | 9 cut(s) | 397, 460, 571, 589, 1650, 2034, 2037, 2144, 2238 |
| FokI | GGATG | 7 cut(s) | 92, 315, 456, 597, 678, 758, 822 |
| FriOI | GRGCYC | 1 cut(s) | 8 |
| Fsp4HI | GCNGC | 9 cut(s) | 397, 460, 571, 589, 1650, 2034, 2037, 2144, 2238 |
| GlaI | GCGC | 2 cut(s) | 922, 1629 |
| GluI | GCNGC | 9 cut(s) | 397, 460, 571, 589, 1650, 2034, 2037, 2144, 2238 |
| GsaI | CCCAGC | 1 cut(s) | 1040 |
| GsuI | CTGGAG | 1 cut(s) | 1911 |
| HaeII | RGCGCY | 1 cut(s) | 1631 |
| HapII | CCGG | 2 cut(s) | 244, 722 |
| HgaI | GACGC | 2 cut(s) | 399, 1586 |
| HhaI | GCGC | 2 cut(s) | 923, 1630 |
| Hin1I | GRCGYC | 1 cut(s) | 410 |
| Hin1II | CATG | 5 cut(s) | 93, 737, 915, 921, 1559 |
| Hin6I | GCGC | 2 cut(s) | 921, 1628 |
| HinP1I | GCGC | 2 cut(s) | 921, 1628 |
| HincII | GTYRAC | 4 cut(s) | 172, 417, 757, 2203 |
| HindII | GTYRAC | 4 cut(s) | 172, 417, 757, 2203 |
| HpaI | GTTAAC | 1 cut(s) | 2203 |
| HpaII | CCGG | 2 cut(s) | 244, 722 |
| HphI | GGTGA | 2 cut(s) | 55, 1762 |
| Hpy99I | CGWCG | 2 cut(s) | 415, 2278 |
| HpyAV | CCTTC | 8 cut(s) | 56, 688, 802, 929, 1229, 1316, 2062, 2067 |
| HpyCH4IV | ACGT | 6 cut(s) | 255, 1049, 1242, 2199, 2205, 2223 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 312, 987, 1879, 2045 |
| HpyF3I | CTNAG | 5 cut(s) | 84, 761, 839, 1088, 1920 |
| HpySE526I | ACGT | 6 cut(s) | 255, 1049, 1242, 2199, 2205, 2223 |
| Hsp92I | GRCGYC | 1 cut(s) | 410 |
| Hsp92II | CATG | 5 cut(s) | 93, 737, 915, 921, 1559 |
| HspAI | GCGC | 2 cut(s) | 921, 1628 |
| Ksp22I | TGATCA | 1 cut(s) | 51 |
| KspAI | GTTAAC | 1 cut(s) | 2203 |
| Kzo9I | GATC | 7 cut(s) | 51, 58, 329, 713, 1759, 1807, 1916 |
| LmnI | GCTCC | 2 cut(s) | 1625, 1879 |
| Lsp1109I | GCAGC | 7 cut(s) | 383, 471, 557, 575, 1636, 2045, 2155 |
| LweI | GCATC | 9 cut(s) | 293, 434, 575, 656, 800, 1558, 1661, 1981, 2249 |
| MaeII | ACGT | 6 cut(s) | 255, 1049, 1242, 2199, 2205, 2223 |
| MaeIII | GTNAC | 6 cut(s) | 350, 647, 1535, 1750, 2026, 2230 |
| MalI | GATC | 7 cut(s) | 53, 60, 331, 715, 1761, 1809, 1918 |
| MboI | GATC | 7 cut(s) | 51, 58, 329, 713, 1759, 1807, 1916 |
| MfeI | CAATTG | 1 cut(s) | 1220 |
| MflI | RGATCY | 2 cut(s) | 713, 1807 |
| MhlI | GDGCHC | 1 cut(s) | 8 |
| MlyI | GAGTC | 5 cut(s) | 40, 458, 1875, 1968, 2219 |
| MmeI | TCCRAC | 2 cut(s) | 1257, 2004 |
| MnlI | CCTC | 7 cut(s) | 89, 685, 720, 980, 1155, 1319, 1781 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1181, 1524 |
| MseI | TTAA | 8 cut(s) | 201, 252, 338, 972, 1166, 1188, 1304, 2202 |
| MslI | CAYNNNNRTG | 3 cut(s) | 738, 916, 1554 |
| MspI | CCGG | 2 cut(s) | 244, 722 |
| MspR9I | CCNGG | 2 cut(s) | 722, 954 |
| MunI | CAATTG | 1 cut(s) | 1220 |
| Mva1269I | GAATGC | 3 cut(s) | 965, 983, 1356 |
| MvaI | CCWGG | 1 cut(s) | 954 |
| MvnI | CGCG | 1 cut(s) | 2278 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 312, 987, 1879, 2045 |
| NciI | CCSGG | 1 cut(s) | 722 |
| NdeII | GATC | 7 cut(s) | 51, 58, 329, 713, 1759, 1807, 1916 |
| NheI | GCTAGC | 3 cut(s) | 71, 1873, 2159 |
| NlaIII | CATG | 5 cut(s) | 93, 737, 915, 921, 1559 |
| NlaIV | GGNNCC | 1 cut(s) | 1809 |
| NmeAIII | GCCGAG | 1 cut(s) | 1625 |
| NmuCI | GTSAC | 2 cut(s) | 1750, 2026 |
| NspI | RCATGY | 2 cut(s) | 93, 915 |
| NspV | TTCGAA | 1 cut(s) | 933 |
| PaeR7I | CTCGAG | 1 cut(s) | 143 |
| PagI | TCATGA | 1 cut(s) | 1555 |
| PciI | ACATGT | 2 cut(s) | 89, 911 |
| PctI | GAATGC | 3 cut(s) | 965, 983, 1356 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1181, 1524 |
| PfeI | GAWTC | 8 cut(s) | 99, 123, 527, 656, 784, 1562, 2020, 2119 |
| PkrI | GCNGC | 9 cut(s) | 398, 461, 572, 590, 1651, 2035, 2038, 2145, 2239 |
| PleI | GAGTC | 5 cut(s) | 39, 457, 1874, 1968, 2218 |
| PpsI | GAGTC | 5 cut(s) | 39, 457, 1874, 1968, 2218 |
| Ppu21I | YACGTR | 2 cut(s) | 1050, 2224 |
| PscI | ACATGT | 2 cut(s) | 89, 911 |
| PshAI | GACNNNNGTC | 2 cut(s) | 422, 1499 |
| PshBI | ATTAAT | 1 cut(s) | 972 |
| Psp124BI | GAGCTC | 1 cut(s) | 8 |
| Psp6I | CCWGG | 1 cut(s) | 952 |
| PspEI | GGTNACC | 3 cut(s) | 350, 1535, 1750 |
| PspFI | CCCAGC | 1 cut(s) | 1036 |
| PspGI | CCWGG | 1 cut(s) | 952 |
| PspN4I | GGNNCC | 1 cut(s) | 1809 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 230, 262 |
| PsuI | RGATCY | 2 cut(s) | 713, 1807 |
| RseI | CAYNNNNRTG | 3 cut(s) | 738, 916, 1554 |
| SacI | GAGCTC | 1 cut(s) | 8 |
| SaqAI | TTAA | 8 cut(s) | 201, 252, 338, 972, 1166, 1188, 1304, 2202 |
| SatI | GCNGC | 9 cut(s) | 397, 460, 571, 589, 1650, 2034, 2037, 2144, 2238 |
| Sau3AI | GATC | 7 cut(s) | 51, 58, 329, 713, 1759, 1807, 1916 |
| SchI | GAGTC | 5 cut(s) | 40, 458, 1875, 1968, 2219 |
| ScrFI | CCNGG | 2 cut(s) | 722, 954 |
| SduI | GDGCHC | 1 cut(s) | 8 |
| SfaNI | GCATC | 9 cut(s) | 293, 434, 575, 656, 800, 1558, 1661, 1981, 2249 |
| SfcI | CTRYAG | 3 cut(s) | 897, 1611, 1776 |
| Sfr274I | CTCGAG | 1 cut(s) | 143 |
| SfuI | TTCGAA | 1 cut(s) | 933 |
| SlaI | CTCGAG | 1 cut(s) | 143 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 738, 916, 1554 |
| SmlI | CTYRAG | 3 cut(s) | 143, 307, 1267 |
| SmoI | CTYRAG | 3 cut(s) | 143, 307, 1267 |
| SpeI | ACTAGT | 1 cut(s) | 1094 |
| SsiI | CCGC | 9 cut(s) | 315, 389, 606, 1041, 1877, 2037, 2235, 2238, 2278 |
| SspI | AATATT | 1 cut(s) | 547 |
| SstI | GAGCTC | 1 cut(s) | 8 |
| StyD4I | CCNGG | 2 cut(s) | 720, 952 |
| StyI | CCWWGG | 2 cut(s) | 364, 660 |
| TaiI | ACGT | 6 cut(s) | 258, 1052, 1245, 2202, 2208, 2226 |
| TatI | WGTACW | 4 cut(s) | 828, 1056, 1250, 1341 |
| TauI | GCSGC | 2 cut(s) | 2039, 2240 |
| TfiI | GAWTC | 8 cut(s) | 99, 123, 527, 656, 784, 1562, 2020, 2119 |
| Tru1I | TTAA | 8 cut(s) | 201, 252, 338, 972, 1166, 1188, 1304, 2202 |
| Tru9I | TTAA | 8 cut(s) | 201, 252, 338, 972, 1166, 1188, 1304, 2202 |
| TscAI | CASTG | 2 cut(s) | 1344, 1894 |
| TseFI | GTSAC | 2 cut(s) | 1750, 2026 |
| TseI | GCWGC | 7 cut(s) | 396, 459, 570, 588, 1649, 2033, 2143 |
| Tsp45I | GTSAC | 2 cut(s) | 1750, 2026 |
| TspGWI | ACGGA | 1 cut(s) | 876 |
| TspRI | CASTG | 2 cut(s) | 1344, 1894 |
| VspI | ATTAAT | 1 cut(s) | 972 |
| XapI | RAATTY | 3 cut(s) | 1142, 1181, 1520 |
| XceI | RCATGY | 2 cut(s) | 93, 915 |
| XhoI | CTCGAG | 1 cut(s) | 143 |
| XmiI | GTMKAC | 5 cut(s) | 452, 1359, 1398, 1515, 1685 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1181, 1524 |