AT2G19365
MYB Family

nuclease activity

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
8380020 .. 8381326
1307 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G19365.1

Sequence Viewer

Length: 255 bp
ATGAGTTCGTCTAAGATGACAACTATCAATGGTACCGATAATCTTGCGTGGAATGATGAGCAAACTCGTTTCTACCTTGAACTAAGAATTGAGGAGAAGCTTAAAGGAAATATTAGGAATCAGAATGTCAATGATGCTGGGAGACAGACTATTATAGATAGATTTTATGAGGTTTATGGGGAAAGACATACATGGAGAAAATTTGGGATCAAGTTTACTACTTGTAAGAAGCAGTATGAAGGTTTAGTAATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

84

Amino Acids

10.01

Weight (kDa)

9.17

Isoelectric Point (pI)

41.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0027007)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G14755 AT2G19365

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 32
AccB1I GGYRCC 1 cut(s) 32
AclWI GGATC 1 cut(s) 215
AcsI RAATTY 1 cut(s) 200
AfaI GTAC 1 cut(s) 34
AgsI TTSAA 1 cut(s) 80
AluBI AGCT 1 cut(s) 100
AluI AGCT 1 cut(s) 100
Alw26I GTCTC 1 cut(s) 136
AlwI GGATC 1 cut(s) 215
ApoI RAATTY 1 cut(s) 200
Asp718I GGTACC 1 cut(s) 32
BanI GGYRCC 1 cut(s) 32
BcgI CGANNNNNNTGC 2 cut(s) 26, 60
BcoDI GTCTC 1 cut(s) 136
BmiI GGNNCC 1 cut(s) 34
BmsI GCATC 1 cut(s) 124
BseRI GAGGAG 1 cut(s) 107
BseYI CCCAGC 1 cut(s) 137
BshNI GGYRCC 1 cut(s) 32
BsmAI GTCTC 1 cut(s) 136
Bsp143I GATC 1 cut(s) 207
BspLI GGNNCC 1 cut(s) 34
BspPI GGATC 1 cut(s) 215
BspT107I GGYRCC 1 cut(s) 32
BssMI GATC 1 cut(s) 207
BstDEI CTNAG 2 cut(s) 12, 83
BstKTI GATC 1 cut(s) 210
BstMAI GTCTC 1 cut(s) 136
BstMBI GATC 1 cut(s) 207
Csp6I GTAC 1 cut(s) 33
CviAII CATG 1 cut(s) 192
CviJI RGCY 1 cut(s) 100
CviKI_1 RGCY 1 cut(s) 100
CviQI GTAC 1 cut(s) 33
DdeI CTNAG 2 cut(s) 12, 83
DpnI GATC 1 cut(s) 209
DpnII GATC 1 cut(s) 207
FaeI CATG 1 cut(s) 195
FaiI YATR 6 cut(s) 155, 168, 177, 189, 193, 237
FatI CATG 1 cut(s) 191
GsaI CCCAGC 1 cut(s) 141
Hin1II CATG 1 cut(s) 195
HindIII AAGCTT 1 cut(s) 98
HinfI GANTC 1 cut(s) 118
Hpy166II GTNNAC 1 cut(s) 216
Hpy188I TCNGA 2 cut(s) 123, 254
Hpy8I GTNNAC 1 cut(s) 216
HpyAV CCTTC 1 cut(s) 233
HpyF3I CTNAG 2 cut(s) 12, 83
Hsp92II CATG 1 cut(s) 195
KpnI GGTACC 1 cut(s) 36
Kzo9I GATC 1 cut(s) 207
LpnPI CCDG 1 cut(s) 123
LweI GCATC 1 cut(s) 124
MalI GATC 1 cut(s) 209
MboI GATC 1 cut(s) 207
MluCI AATT 2 cut(s) 87, 200
MnlI CCTC 2 cut(s) 85, 163
MseI TTAA 1 cut(s) 102
NdeII GATC 1 cut(s) 207
NlaIII CATG 1 cut(s) 195
NlaIV GGNNCC 1 cut(s) 34
PfeI GAWTC 1 cut(s) 118
PspFI CCCAGC 1 cut(s) 137
PspN4I GGNNCC 1 cut(s) 34
RsaI GTAC 1 cut(s) 34
RsaNI GTAC 1 cut(s) 33
SaqAI TTAA 1 cut(s) 102
Sau3AI GATC 1 cut(s) 207
SetI ASST 4 cut(s) 78, 102, 174, 244
SfaNI GCATC 1 cut(s) 124
SgeI CNNG 8 cut(s) 56, 60, 78, 89, 150, 204, 223, 234
Sse9I AATT 2 cut(s) 87, 200
SspI AATATT 1 cut(s) 112
TasI AATT 2 cut(s) 87, 200
TfiI GAWTC 1 cut(s) 118
Tru1I TTAA 1 cut(s) 102
Tru9I TTAA 1 cut(s) 102
TspDTI ATGAA 1 cut(s) 252
XapI RAATTY 1 cut(s) 200
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.