AT2G22850
BZIP Family

basic region leucin zipper

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0023669
Physical Location & Seq
Reverse (-)
9731279 .. 9733612
2334 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G22850.1

Sequence Viewer

Length: 684 bp
ATGATGTCTACTGTACCGGCCTTTACCTTTACTGAACCGGGTTTGGTTAACCAATTATCGGATTTCCAGACCGGATTCACTCCTTGGGAATTGAACTGCTCCGATCTCTTCTCTACAATCCATCTCGAACCGGTCGTACCGAGTCCTTGTTCTGGTGAATCCGATGCCGGTTCTGTCAAAATTAACACCGATTTTAACGGTTTTGACGAATCGTGTATCGGTTCCATCAAAACTAACTCCGGTTCTGATGATTCCAACCTTTTCCACGGCGTACCGAGTCCTCAATCCGACGAATTGGACTCAAAAAACACGAAAATCCGAAGTAACGCCACGAATCATAACCGGAACAAATTGAACCGGTCGGTTTTGCAGGTGACTGACGACCGTAAACGCAAACGGATGGAATCAAACCGAGAATCAGCGAAGCGGTCGAGGATGCGTAAACAAAGACACATTGATAATTTAAAAGACGAAGCAAATCGTCTCGGTTTAGAAAACCGGGAACTCGCAAACCGGCTTCGAATTGTTTTGTACAACATCGCATTAATGTGTACGGACAACAATCAGCTTTTGTCGGAACAAGAGATTCTCAGACGGAGATTCTTGGAGATGAGGCAGATTTTGATTTTCAGACAGCTTCAGCTGAATCCATCATTGATCATCAATCATCATCATATGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
bZIP_1

Protein Analysis

227

Amino Acids

26.04

Weight (kDa)

8.4

Isoelectric Point (pI)

63.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_2 PF07716 126 - 173 9.1e-07 Basic region leucine zipper
bZIP_1 PF00170 128 - 173 2e-08 bZIP transcription factor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0023669)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22850 AT2G22850 AT4G37730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 361
Acc36I ACCTGC 1 cut(s) 361
AccI GTMKAC 1 cut(s) 8
AciI CCGC 1 cut(s) 427
AcuI CTGAAG 1 cut(s) 623
AfaI GTAC 5 cut(s) 15, 138, 273, 533, 553
AfiI CCNNNNNNNGG 2 cut(s) 58, 152
AgeI ACCGGT 2 cut(s) 130, 357
AgsI TTSAA 2 cut(s) 94, 355
AluBI AGCT 3 cut(s) 568, 637, 643
AluI AGCT 3 cut(s) 568, 637, 643
Alw26I GTCTC 1 cut(s) 488
AoxI GGCC 1 cut(s) 18
AseI ATTAAT 1 cut(s) 545
AsiGI ACCGGT 2 cut(s) 130, 357
AsuC2I CCSGG 2 cut(s) 39, 500
AsuHPI GGTGA 2 cut(s) 167, 385
AsuII TTCGAA 1 cut(s) 520
BccI CCATC 4 cut(s) 129, 233, 394, 658
BceAI ACGGC 1 cut(s) 283
BclI TGATCA 1 cut(s) 657
BcnI CCSGG 2 cut(s) 39, 500
BcoDI GTCTC 1 cut(s) 488
BfuAI ACCTGC 1 cut(s) 361
Bme1390I CCNGG 2 cut(s) 39, 500
BmiI GGNNCC 1 cut(s) 223
BmrFI CCNGG 2 cut(s) 39, 500
BmsI GCATC 2 cut(s) 154, 426
Bpu14I TTCGAA 1 cut(s) 520
BpuMI CCSGG 2 cut(s) 39, 500
BsaJI CCNNGG 2 cut(s) 83, 265
BsaWI WCCGGW 5 cut(s) 71, 130, 239, 342, 357
Bsc4I CCNNNNNNNGG 2 cut(s) 58, 152
Bse118I RCCGGY 5 cut(s) 16, 130, 167, 357, 513
BseDI CCNNGG 2 cut(s) 83, 265
BseGI GGATG 2 cut(s) 405, 441
BseLI CCNNNNNNNGG 2 cut(s) 58, 152
BseMII CTCAG 1 cut(s) 604
Bsh1285I CGRYCG 4 cut(s) 135, 362, 385, 431
BshFI GGCC 1 cut(s) 20
BshTI ACCGGT 2 cut(s) 130, 357
BsiEI CGRYCG 4 cut(s) 135, 362, 385, 431
BslI CCNNNNNNNGG 2 cut(s) 58, 152
BsmAI GTCTC 1 cut(s) 488
BsmBI CGTCTC 1 cut(s) 488
BsnI GGCC 1 cut(s) 20
Bsp119I TTCGAA 1 cut(s) 520
Bsp1407I TGTACA 1 cut(s) 531
Bsp143I GATC 2 cut(s) 103, 657
BspACI CCGC 1 cut(s) 427
BspANI GGCC 1 cut(s) 20
BspCNI CTCAG 1 cut(s) 603
BspLI GGNNCC 1 cut(s) 223
BspMI ACCTGC 1 cut(s) 361
BspT104I TTCGAA 1 cut(s) 520
BsrFI RCCGGY 5 cut(s) 16, 130, 167, 357, 513
BsrGI TGTACA 1 cut(s) 531
BssAI RCCGGY 5 cut(s) 16, 130, 167, 357, 513
BssECI CCNNGG 2 cut(s) 83, 265
BssMI GATC 2 cut(s) 103, 657
BssT1I CCWWGG 1 cut(s) 83
Bst4CI ACNGT 3 cut(s) 13, 200, 386
Bst6I CTCTTC 1 cut(s) 113
BstAUI TGTACA 1 cut(s) 531
BstBI TTCGAA 1 cut(s) 520
BstDEI CTNAG 1 cut(s) 590
BstDSI CCRYGG 1 cut(s) 265
BstF5I GGATG 2 cut(s) 405, 441
BstKTI GATC 2 cut(s) 106, 660
BstMAI GTCTC 1 cut(s) 488
BstMBI GATC 2 cut(s) 103, 657
BstMCI CGRYCG 4 cut(s) 135, 362, 385, 431
BstSCI CCNGG 2 cut(s) 37, 498
BsuRI GGCC 1 cut(s) 20
BtgI CCRYGG 1 cut(s) 265
BtgZI GCGATG 1 cut(s) 523
BtsCI GGATG 2 cut(s) 405, 441
BveI ACCTGC 1 cut(s) 361
Cfr10I RCCGGY 5 cut(s) 16, 130, 167, 357, 513
Csp6I GTAC 5 cut(s) 14, 137, 272, 532, 552
CspAI ACCGGT 2 cut(s) 130, 357
CviJI RGCY 5 cut(s) 20, 517, 568, 637, 643
CviKI_1 RGCY 5 cut(s) 20, 517, 568, 637, 643
CviQI GTAC 5 cut(s) 14, 137, 272, 532, 552
DdeI CTNAG 1 cut(s) 590
DpnI GATC 2 cut(s) 105, 659
DpnII GATC 2 cut(s) 103, 657
DraI TTTAAA 1 cut(s) 465
Eam1104I CTCTTC 1 cut(s) 113
EarI CTCTTC 1 cut(s) 113
Eco130I CCWWGG 1 cut(s) 83
Eco57I CTGAAG 1 cut(s) 623
EcoT14I CCWWGG 1 cut(s) 83
ErhI CCWWGG 1 cut(s) 83
Esp3I CGTCTC 1 cut(s) 488
FaiI YATR 3 cut(s) 339, 675, 677
FauNDI CATATG 1 cut(s) 675
FbaI TGATCA 1 cut(s) 657
FblI GTMKAC 1 cut(s) 8
FokI GGATG 2 cut(s) 412, 448
HaeIII GGCC 1 cut(s) 20
HincII GTYRAC 1 cut(s) 49
HindII GTYRAC 1 cut(s) 49
HpaI GTTAAC 1 cut(s) 49
HphI GGTGA 2 cut(s) 167, 385
Hpy166II GTNNAC 5 cut(s) 9, 49, 389, 443, 552
Hpy188I TCNGA 9 cut(s) 61, 103, 163, 247, 289, 320, 577, 593, 632
Hpy188III TCNNGA 2 cut(s) 67, 125
Hpy8I GTNNAC 5 cut(s) 9, 49, 389, 443, 552
Hpy99I CGWCG 1 cut(s) 293
HpyCH4III ACNGT 3 cut(s) 13, 200, 386
HpyCH4V TGCA 1 cut(s) 370
HpyF3I CTNAG 1 cut(s) 590
Ksp22I TGATCA 1 cut(s) 657
KspAI GTTAAC 1 cut(s) 49
Kzo9I GATC 2 cut(s) 103, 657
LmnI GCTCC 1 cut(s) 104
LweI GCATC 2 cut(s) 154, 426
MaeIII GTNAC 2 cut(s) 323, 373
MalI GATC 2 cut(s) 105, 659
MboI GATC 2 cut(s) 103, 657
MboII GAAGA 1 cut(s) 100
MluCI AATT 7 cut(s) 53, 89, 180, 293, 350, 460, 522
MlyI GAGTC 3 cut(s) 151, 286, 293
MmeI TCCRAC 3 cut(s) 279, 312, 555
MnlI CCTC 3 cut(s) 291, 426, 606
MseI TTAA 5 cut(s) 48, 183, 195, 464, 545
MslI CAYNNNNRTG 1 cut(s) 547
MspA1I CMGCKG 1 cut(s) 643
MspR9I CCNGG 2 cut(s) 39, 500
NciI CCSGG 2 cut(s) 39, 500
NdeI CATATG 1 cut(s) 675
NdeII GATC 2 cut(s) 103, 657
NlaIV GGNNCC 1 cut(s) 223
NmuCI GTSAC 1 cut(s) 373
NspV TTCGAA 1 cut(s) 520
PaqCI CACCTGC 1 cut(s) 361
PcsI WCGNNNNNNNCGW 2 cut(s) 132, 204
PinAI ACCGGT 2 cut(s) 130, 357
PleI GAGTC 3 cut(s) 150, 285, 293
PpsI GAGTC 3 cut(s) 150, 285, 293
PshBI ATTAAT 1 cut(s) 545
PspN4I GGNNCC 1 cut(s) 223
PsrI GAACNNNNNNTAC 2 cut(s) 120, 152
PvuII CAGCTG 1 cut(s) 643
RsaI GTAC 5 cut(s) 15, 138, 273, 533, 553
RsaNI GTAC 5 cut(s) 14, 137, 272, 532, 552
RseI CAYNNNNRTG 1 cut(s) 547
SaqAI TTAA 5 cut(s) 48, 183, 195, 464, 545
Sau3AI GATC 2 cut(s) 103, 657
SchI GAGTC 3 cut(s) 151, 286, 293
ScrFI CCNGG 2 cut(s) 39, 500
SetI ASST 6 cut(s) 29, 261, 375, 570, 639, 645
SfaNI GCATC 2 cut(s) 154, 426
SfuI TTCGAA 1 cut(s) 520
SmiMI CAYNNNNRTG 1 cut(s) 547
Sse9I AATT 7 cut(s) 53, 89, 180, 293, 350, 460, 522
SsiI CCGC 1 cut(s) 427
StyD4I CCNGG 2 cut(s) 37, 498
StyI CCWWGG 1 cut(s) 83
TaaI ACNGT 3 cut(s) 13, 200, 386
TaqI TCGA 3 cut(s) 126, 431, 520
TasI AATT 7 cut(s) 53, 89, 180, 293, 350, 460, 522
TatI WGTACW 1 cut(s) 531
Tru1I TTAA 5 cut(s) 48, 183, 195, 464, 545
Tru9I TTAA 5 cut(s) 48, 183, 195, 464, 545
TseFI GTSAC 1 cut(s) 373
Tsp45I GTSAC 1 cut(s) 373
TspGWI ACGGA 3 cut(s) 412, 569, 610
VspI ATTAAT 1 cut(s) 545
XmiI GTMKAC 1 cut(s) 8
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.