Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0017117

Physical Location & Seq

Genomic Coordinates Forward (+)

14216771 .. 14219252

Gene Structure 2482 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G33570.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1491 bp

ATGAGGAAGGAAGTTTTGCCGCCGGTGTTATCAACCACCACAGTATGTTTCGAGAAGAAACCAATAATTGCTACATTACTAGCTCTCTCTCTCGTCATGATTGTCTGGAACCTTCCTCCTTACTACCACAACCTCATCTCCACCGCTCGTCCCTGCTCCGCCGTCACCACCACCACCACCACCACCTTACTCTCCTCATCGAACTTCACTTCGGCGGAGAATTTCACCACCTCTCTCTCAACGACAACTGCAGCAGCTTCTCAGAAGTACGATTCAACTCCCTCAGATCCGAACAAACGCGTTTTCCAACCGTTCGGAAACGCGGCGGCGTTATTCGTACTAATGGGAGCTTACCGCGGCGGTCCAACGACGTTTTCCGTTATCGGACTCGCGTCGAAACCGATCCACGTTTACGGAAAACCATGGTACAAGTGTGAGTGGATATCTAACAATGGAACTTCGATTCGAGCTAAAGCACAGAAGATTCTACCAGATTGGGGATACGGACGAGTCTACACCGTCGTCGTCGTCAATTGCACTTTCAATTCAAACCCTAACTCCGATAACACCGGAGGTAAACTCATTCTCAACGCTTACTACAACGAATCTCCCAAACTCTTTGAACGATTCACTACGTTAGAAGAATCAGCTGGAATCTACGACGAATCGAAATACTCGCCGCCGTATCAGTACGATTACCTCTATTGTGGCTCGTCACTGTACGGTAACGTGAGCGCGTCGCGTATGAGAGAGTGGATGGCTTACCACGCTTGGTTCTTTGGTGACAAATCGCATTTTGTTTTCCACGATGCTGGTGGTGTGTCGCCGGAAGTTAGGAAGGTTCTTGAGCCGTGGATTCGAGCTGGGAGGGTCACGGTTCAGAATATTCGGGATCAGTCGCAGTATGATGGTTACTACTATAATCAGTTTCTTATTGTTAATGATTGCTTGCATCGGTATCGATACGCTGCGAATTGGACCTTCTTCTTCGATGTCGATGAGTATATCTATTTGCCGCATGGTAATACACTCGAATCCGTGCTCGATGAGTTCTCGGTTAACACGCAGTTTACGATTGAGCAGAATCCAATGTCTAGTGTTCTTTGCATAAACGACTCTTCTCAAGATTATCCAAGGCAATGGGGATTTGAGAAATTGTTATTTAAGGATTCAAGGACGAAGATACGACGTGATAGAAAATATGCAATCCAAGCGAAGAACGCATTTGCTACAGGAGTTCATATGTCTGAAAACATTGTAGGCAAAACACTACACAAGACAGAGACAAAGATTCGTTATTACCATTACCACAACACCATAACTGTGCATGAGGAGCTTTGTAGAGAGATGTTACCAAATTCAGCCAAGAAGAAGGTGACATTGTACAATAAGCTTCCGTATGTGTATGATGACAACATGAAGAAGCTAGTGAAGACGATTAAAGAGTTTGAGCAGAAAAAACTTGGGACGGATGTGAAGAATTTCTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005794 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0008378 GO:0009058 GO:0009059 GO:0009987 GO:0010393 GO:0012505 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0017144 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0045488 GO:0045489 GO:0048531 GO:0071554 GO:0071704 GO:0071840 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_transf_92

Protein Analysis

496

Amino Acids

56.86

Weight (kDa)

8.99

Isoelectric Point (pI)

34.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_92	PF01697	232 - 460	2.6e-40	Glycosyltransferase family 92
Glyco_tranf_2_4	PF13704	246 - 347	3.3e-07	Glycosyl transferase family 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017117)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33570
fragaria_vesca	FvH4_5g26560
prunus_persica	Prupe.5G001800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0217441
rosa_laevigata	RLG00000002475
rosa_multiflora	Rmu_co8475107.1_g000001
rosa_roxburghii	Rroxscaffold_3G00242010
rosa_rugosa	Rorug07G0169200
rosa_samantha	Rh7AG308800 Rh7BG299700 Rh7CG328200 Rh7DG308100
rosa_wichuraiana	Rw7G026190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	146
AccI	GTMKAC	1 cut(s)	513
AccII	CGCG	6 cut(s)	300, 323, 357, 392, 737, 742
AclWI	GGATC	3 cut(s)	281, 397, 900
AcsI	RAATTY	3 cut(s)	220, 1357, 1480
AfaI	GTAC	6 cut(s)	269, 339, 428, 692, 722, 1385
AfiI	CCNNNNNNNGG	1 cut(s)	497
AflIII	ACRYGT	1 cut(s)	298
AgsI	TTSAA	5 cut(s)	276, 544, 549, 623, 1173
AjiI	CACGTC	1 cut(s)	1190
AjuI	GAANNNNNNNTTGG	2 cut(s)	358, 390
AluBI	AGCT	9 cut(s)	83, 257, 350, 470, 650, 863, 1336, 1393, 1426
AluI	AGCT	9 cut(s)	83, 257, 350, 470, 650, 863, 1336, 1393, 1426
Alw21I	GWGCWC	1 cut(s)	1044
Alw26I	GTCTC	1 cut(s)	1277
AlwI	GGATC	3 cut(s)	281, 397, 900
ApeKI	GCWGC	3 cut(s)	251, 254, 968
ApoI	RAATTY	3 cut(s)	220, 1357, 1480
Asp700I	GAANNNNTTC	1 cut(s)	1481
AspLEI	GCGC	1 cut(s)	737
AspS9I	GGNCC	2 cut(s)	362, 978
AsuHPI	GGTGA	4 cut(s)	157, 217, 794, 1387
AvaII	GGWCC	2 cut(s)	362, 978
BaeI	ACNNNNGTAYC	2 cut(s)	418, 451
BbsI	GAAGAC	1 cut(s)	1439
Bbv12I	GWGCWC	1 cut(s)	1044
BbvI	GCAGC	3 cut(s)	263, 266, 955
BccI	CCATC	2 cut(s)	751, 902
BceAI	ACGGC	3 cut(s)	146, 667, 835
BcgI	CGANNNNNNTGC	2 cut(s)	941, 975
BciVI	GTATCC	1 cut(s)	494
BcoDI	GTCTC	1 cut(s)	1277
BfaI	CTAG	3 cut(s)	80, 1095, 1427
BfmI	CTRYAG	2 cut(s)	249, 1230
BfuI	GTATCC	1 cut(s)	494
BisI	GCNGC	9 cut(s)	20, 252, 255, 324, 327, 358, 680, 969, 1016
BlsI	GCNGC	9 cut(s)	21, 253, 256, 325, 328, 359, 681, 970, 1017
Bme18I	GGWCC	2 cut(s)	362, 978
BmgBI	CACGTC	1 cut(s)	1190
BmgT120I	GGNCC	2 cut(s)	362, 978
BmiI	GGNNCC	1 cut(s)	110
BmsI	GCATC	2 cut(s)	799, 961
BoxI	GACNNNNGTC	1 cut(s)	391
BpiI	GAAGAC	1 cut(s)	1439
BplI	GAGNNNNNCTC	2 cut(s)	564, 596
BpuEI	CTTGAG	2 cut(s)	866, 1107
Bsa29I	ATCGAT	1 cut(s)	961
BsaJI	CCNNGG	4 cut(s)	355, 422, 851, 1133
BsaWI	WCCGGW	1 cut(s)	569
BsaXI	ACNNNNNCTCC	4 cut(s)	122, 152, 542, 572
Bsc4I	CCNNNNNNNGG	1 cut(s)	497
Bse118I	RCCGGY	1 cut(s)	22
Bse3DI	GCAATG	1 cut(s)	1145
BseCI	ATCGAT	1 cut(s)	961
BseDI	CCNNGG	4 cut(s)	355, 422, 851, 1133
BseGI	GGATG	2 cut(s)	762, 1477
BseLI	CCNNNNNNNGG	1 cut(s)	497
BseMI	GCAATG	1 cut(s)	1145
BseMII	CTCAG	2 cut(s)	275, 297
BseRI	GAGGAG	2 cut(s)	184, 1346
BseXI	GCAGC	3 cut(s)	263, 266, 955
BseYI	CCCAGC	1 cut(s)	863
Bsh1236I	CGCG	6 cut(s)	300, 323, 357, 392, 737, 742
BshVI	ATCGAT	1 cut(s)	961
BsiHKAI	GWGCWC	1 cut(s)	1044
BsiSI	CCGG	3 cut(s)	23, 570, 827
BslFI	GGGAC	2 cut(s)	135, 1480
BslI	CCNNNNNNNGG	1 cut(s)	497
BsmAI	GTCTC	1 cut(s)	1277
BsmFI	GGGAC	2 cut(s)	135, 1480
Bsp1286I	GDGCHC	1 cut(s)	1044
Bsp1407I	TGTACA	1 cut(s)	1383
Bsp143I	GATC	3 cut(s)	286, 402, 892
Bsp19I	CCATGG	1 cut(s)	422
BspCNI	CTCAG	2 cut(s)	274, 296
BspDI	ATCGAT	1 cut(s)	961
BspFNI	CGCG	6 cut(s)	300, 323, 357, 392, 737, 742
BspHI	TCATGA	2 cut(s)	96, 1487
BspLI	GGNNCC	1 cut(s)	110
BspMAI	CTGCAG	1 cut(s)	253
BspPI	GGATC	3 cut(s)	281, 397, 900
BsrBI	CCGCTC	1 cut(s)	146
BsrDI	GCAATG	1 cut(s)	1145
BsrFI	RCCGGY	1 cut(s)	22
BsrGI	TGTACA	1 cut(s)	1383
BssAI	RCCGGY	1 cut(s)	22
BssECI	CCNNGG	4 cut(s)	355, 422, 851, 1133
BssMI	GATC	3 cut(s)	286, 402, 892
BssT1I	CCWWGG	2 cut(s)	422, 1133
Bst4CI	ACNGT	7 cut(s)	43, 312, 520, 720, 725, 877, 1324
Bst6I	CTCTTC	1 cut(s)	1123
BstAUI	TGTACA	1 cut(s)	1383
BstC8I	GCNNGC	1 cut(s)	950
BstDEI	CTNAG	2 cut(s)	261, 283
BstDSI	CCRYGG	3 cut(s)	355, 422, 851
BstF5I	GGATG	2 cut(s)	762, 1477
BstFNI	CGCG	6 cut(s)	300, 323, 357, 392, 737, 742
BstHHI	GCGC	1 cut(s)	737
BstKTI	GATC	3 cut(s)	289, 405, 895
BstMAI	GTCTC	1 cut(s)	1277
BstMBI	GATC	3 cut(s)	286, 402, 892
BstMWI	GCNNNNNNNGC	4 cut(s)	767, 1211, 1220, 1333
BstPAI	GACNNNNGTC	1 cut(s)	391
BstSFI	CTRYAG	2 cut(s)	249, 1230
BstUI	CGCG	6 cut(s)	300, 323, 357, 392, 737, 742
BstV1I	GCAGC	3 cut(s)	263, 266, 955
BstV2I	GAAGAC	1 cut(s)	1439
BstX2I	RGATCY	1 cut(s)	286
BstXI	CCANNNNNNTGG	2 cut(s)	812, 1140
BstYI	RGATCY	1 cut(s)	286
Bsu15I	ATCGAT	1 cut(s)	961
BsuI	GTATCC	1 cut(s)	494
BsuTUI	ATCGAT	1 cut(s)	961
BtgI	CCRYGG	3 cut(s)	355, 422, 851
BtrI	CACGTC	1 cut(s)	1190
BtsCI	GGATG	2 cut(s)	762, 1477
BtsIMutI	CAGTG	1 cut(s)	716
Cac8I	GCNNGC	1 cut(s)	950
CciI	TCATGA	2 cut(s)	96, 1487
CfoI	GCGC	1 cut(s)	737
Cfr10I	RCCGGY	1 cut(s)	22
Cfr13I	GGNCC	2 cut(s)	362, 978
Cfr42I	CCGCGG	1 cut(s)	358
ClaI	ATCGAT	1 cut(s)	961
CseI	GACGC	2 cut(s)	381, 726
Csp6I	GTAC	6 cut(s)	268, 338, 427, 691, 721, 1384
CviAII	CATG	6 cut(s)	97, 423, 1019, 1328, 1417, 1488
CviQI	GTAC	6 cut(s)	268, 338, 427, 691, 721, 1384
DdeI	CTNAG	2 cut(s)	261, 283
DpnI	GATC	3 cut(s)	288, 404, 894
DpnII	GATC	3 cut(s)	286, 402, 892
Eam1104I	CTCTTC	1 cut(s)	1123
EarI	CTCTTC	1 cut(s)	1123
EciI	GGCGGA	2 cut(s)	148, 230
Eco130I	CCWWGG	2 cut(s)	422, 1133
Eco32I	GATATC	1 cut(s)	444
Eco47I	GGWCC	2 cut(s)	362, 978
EcoRV	GATATC	1 cut(s)	444
EcoT14I	CCWWGG	2 cut(s)	422, 1133
ErhI	CCWWGG	2 cut(s)	422, 1133
FaeI	CATG	6 cut(s)	100, 426, 1022, 1331, 1420, 1491
FaqI	GGGAC	2 cut(s)	135, 1480
FatI	CATG	6 cut(s)	96, 422, 1018, 1327, 1416, 1487
FauNDI	CATATG	1 cut(s)	1242
FblI	GTMKAC	1 cut(s)	513
Fnu4HI	GCNGC	9 cut(s)	20, 252, 255, 324, 327, 358, 680, 969, 1016
FokI	GGATG	2 cut(s)	769, 1484
Fsp4HI	GCNGC	9 cut(s)	20, 252, 255, 324, 327, 358, 680, 969, 1016
FspBI	CTAG	3 cut(s)	80, 1095, 1427
GlaI	GCGC	1 cut(s)	736
GluI	GCNGC	9 cut(s)	20, 252, 255, 324, 327, 358, 680, 969, 1016
GsaI	CCCAGC	1 cut(s)	867
HapII	CCGG	3 cut(s)	23, 570, 827
HgaI	GACGC	2 cut(s)	381, 726
HhaI	GCGC	1 cut(s)	737
Hin1II	CATG	6 cut(s)	100, 426, 1022, 1331, 1420, 1491
Hin6I	GCGC	1 cut(s)	735
HinP1I	GCGC	1 cut(s)	735
HincII	GTYRAC	1 cut(s)	1060
HindII	GTYRAC	1 cut(s)	1060
HindIII	AAGCTT	1 cut(s)	1391
HpaI	GTTAAC	1 cut(s)	1060
HpaII	CCGG	3 cut(s)	23, 570, 827
HphI	GGTGA	4 cut(s)	157, 217, 794, 1387
Hpy166II	GTNNAC	5 cut(s)	412, 514, 578, 1060, 1071
Hpy188I	TCNGA	8 cut(s)	264, 286, 291, 317, 386, 562, 882, 1249
Hpy188III	TCNNGA	7 cut(s)	52, 97, 106, 845, 890, 1124, 1488
Hpy8I	GTNNAC	5 cut(s)	412, 514, 578, 1060, 1071
Hpy99I	CGWCG	8 cut(s)	373, 397, 524, 527, 530, 665, 742, 1191
HpyAV	CCTTC	4 cut(s)	122, 832, 991, 1366
HpyCH4III	ACNGT	7 cut(s)	43, 312, 520, 720, 725, 877, 1324
HpyCH4IV	ACGT	5 cut(s)	371, 408, 635, 729, 1189
HpyCH4V	TGCA	6 cut(s)	251, 537, 952, 1107, 1205, 1327
HpyF10VI	GCNNNNNNNGC	4 cut(s)	767, 1211, 1220, 1333
HpyF3I	CTNAG	2 cut(s)	261, 283
HpySE526I	ACGT	5 cut(s)	371, 408, 635, 729, 1189
Hsp92II	CATG	6 cut(s)	100, 426, 1022, 1331, 1420, 1491
HspAI	GCGC	1 cut(s)	735
KspAI	GTTAAC	1 cut(s)	1060
KspI	CCGCGG	1 cut(s)	358
Kzo9I	GATC	3 cut(s)	286, 402, 892
LmnI	GCTCC	3 cut(s)	161, 347, 1333
Lsp1109I	GCAGC	3 cut(s)	263, 266, 955
LweI	GCATC	2 cut(s)	799, 961
MaeI	CTAG	3 cut(s)	80, 1095, 1427
MaeII	ACGT	5 cut(s)	371, 408, 635, 729, 1189
MaeIII	GTNAC	8 cut(s)	163, 714, 725, 782, 871, 911, 1350, 1375
MalI	GATC	3 cut(s)	288, 404, 894
MbiI	CCGCTC	1 cut(s)	146
MboI	GATC	3 cut(s)	286, 402, 892
MfeI	CAATTG	1 cut(s)	532
MflI	RGATCY	1 cut(s)	286
MhlI	GDGCHC	1 cut(s)	1044
MluCI	AATT	8 cut(s)	66, 220, 532, 544, 973, 1154, 1357, 1480
MluI	ACGCGT	1 cut(s)	298
MlyI	GAGTC	3 cut(s)	381, 519, 1109
MmeI	TCCRAC	2 cut(s)	331, 389
MnlI	CCTC	9 cut(s)	126, 143, 205, 241, 292, 566, 710, 861, 1324
MroXI	GAANNNNTTC	1 cut(s)	1481
MseI	TTAA	4 cut(s)	939, 1059, 1164, 1440
MslI	CAYNNNNRTG	1 cut(s)	1322
MspA1I	CMGCKG	2 cut(s)	357, 650
MspI	CCGG	3 cut(s)	23, 570, 827
MunI	CAATTG	1 cut(s)	532
MvnI	CGCG	6 cut(s)	300, 323, 357, 392, 737, 742
MwoI	GCNNNNNNNGC	4 cut(s)	767, 1211, 1220, 1333
NcoI	CCATGG	1 cut(s)	422
NdeI	CATATG	1 cut(s)	1242
NdeII	GATC	3 cut(s)	286, 402, 892
NlaIII	CATG	6 cut(s)	100, 426, 1022, 1331, 1420, 1491
NlaIV	GGNNCC	1 cut(s)	110
NmuCI	GTSAC	5 cut(s)	163, 714, 782, 871, 1375
PagI	TCATGA	2 cut(s)	96, 1487
PcsI	WCGNNNNNNNCGW	1 cut(s)	1070
PdmI	GAANNNNTTC	1 cut(s)	1481
PkrI	GCNGC	9 cut(s)	21, 253, 256, 325, 328, 359, 681, 970, 1017
PleI	GAGTC	3 cut(s)	381, 518, 1109
PpsI	GAGTC	3 cut(s)	381, 518, 1109
PshAI	GACNNNNGTC	1 cut(s)	391
PspFI	CCCAGC	1 cut(s)	863
PspN4I	GGNNCC	1 cut(s)	110
PspPI	GGNCC	2 cut(s)	362, 978
PstI	CTGCAG	1 cut(s)	253
PsuI	RGATCY	1 cut(s)	286
PvuII	CAGCTG	1 cut(s)	650
RsaI	GTAC	6 cut(s)	269, 339, 428, 692, 722, 1385
RsaNI	GTAC	6 cut(s)	268, 338, 427, 691, 721, 1384
RseI	CAYNNNNRTG	1 cut(s)	1322
SacII	CCGCGG	1 cut(s)	358
SaqAI	TTAA	4 cut(s)	939, 1059, 1164, 1440
SatI	GCNGC	9 cut(s)	20, 252, 255, 324, 327, 358, 680, 969, 1016
Sau3AI	GATC	3 cut(s)	286, 402, 892
Sau96I	GGNCC	2 cut(s)	362, 978
SchI	GAGTC	3 cut(s)	381, 519, 1109
SduI	GDGCHC	1 cut(s)	1044
SfaNI	GCATC	2 cut(s)	799, 961
SfcI	CTRYAG	2 cut(s)	249, 1230
Sfr303I	CCGCGG	1 cut(s)	358
SgrAI	CRCCGGYG	1 cut(s)	22
SgrBI	CCGCGG	1 cut(s)	358
SinI	GGWCC	2 cut(s)	362, 978
SmiMI	CAYNNNNRTG	1 cut(s)	1322
SmlI	CTYRAG	2 cut(s)	845, 1122
SmoI	CTYRAG	2 cut(s)	845, 1122
Sse9I	AATT	8 cut(s)	66, 220, 532, 544, 973, 1154, 1357, 1480
SspI	AATATT	1 cut(s)	886
SspMI	CTAG	3 cut(s)	80, 1095, 1427
StyI	CCWWGG	2 cut(s)	422, 1133
TaaI	ACNGT	7 cut(s)	43, 312, 520, 720, 725, 877, 1324
TaiI	ACGT	5 cut(s)	374, 411, 638, 732, 1192
TasI	AATT	8 cut(s)	66, 220, 532, 544, 973, 1154, 1357, 1480
TatI	WGTACW	1 cut(s)	1383
TauI	GCSGC	6 cut(s)	22, 326, 329, 360, 682, 1018
Tru1I	TTAA	4 cut(s)	939, 1059, 1164, 1440
Tru9I	TTAA	4 cut(s)	939, 1059, 1164, 1440
TscAI	CASTG	1 cut(s)	723
TseFI	GTSAC	5 cut(s)	163, 714, 782, 871, 1375
TseI	GCWGC	3 cut(s)	251, 254, 968
Tsp45I	GTSAC	5 cut(s)	163, 714, 782, 871, 1375
TspDTI	ATGAA	2 cut(s)	1229, 1433
TspGWI	ACGGA	6 cut(s)	367, 429, 519, 1027, 1386, 1484
TspRI	CASTG	1 cut(s)	723
VpaK11BI	GGWCC	2 cut(s)	362, 978
XapI	RAATTY	3 cut(s)	220, 1357, 1480
XcmI	CCANNNNNNNNNTGG	1 cut(s)	812
XmiI	GTMKAC	1 cut(s)	513
XmnI	GAANNNNTTC	1 cut(s)	1481
XspI	CTAG	3 cut(s)	80, 1095, 1427

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.