AT2G35890

calcium-dependent protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
15066614 .. 15069359
2746 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G35890.1

Sequence Viewer

Length: 1563 bp
ATGGGGAATGTATGTGTTCATATGGTCAACAATTGTGTGGATACGAAATCGAATTCATGGGTTCGTCCCACAGATCTCATCATGGATCATCCCTTGAAGCCACAACTCCAGGACAAGCCTCCTCAGCCAATGCTAATGAACAAGGATGATGATAAAACCAAGCTTAATGACACTCATGGTGACCCTAAATTACTTGAGGGGAAAGAGAAACCTGCGCAGAAGCAAACGAGTCAGGGACAAGGAGGAAGGAAGTGCAGTGACGAAGAGTATAAGAAGCGAGCGATTGCGTGTGCTAACAGTAAAAGAAAGGCTCACAATGTGAGGAGACTGATGAGTGCAGGGCTACAAGCAGAGTCAGTGTTGAAGACCAAAACAGGGCATTTGAAGGAATATTATAACTTGGGTAGCAAGTTAGGTCATGGACAGTTTGGGACTACGTTTGTGTGTGTTGAGAAAGGAACAGGGGAGGAATATGCATGCAAGTCGATTCCGAAGAGGAAGCTAGAGAACGAAGAAGACGTGGAGGATGTGAGAAGAGAGATTGAGATAATGAAACATCTCTTGGGGCAACCAAATGTGATCTCCATCAAAGGAGCTTATGAGGACTCAGTGGCTGTTCACATGGTGATGGAGCTGTGTAGAGGAGGTGAGCTGTTTGATAGGATAGTGGAGAGAGGGCATTACTCTGAGAGAAAAGCTGCTCATTTGGCTAAAGTCATACTTGGTGTGGTTCAGACTTGTCATTCTTTAGGTGTGATGCACAGAGATCTTAAACCTGAGAACTTTCTCTTTGTCAACGATGACGAGGATTCGCCTCTTAAGGCTATTGATTTCGGGTTATCTATGTTTCTCAAGCCTGGAGAAAACTTTACGGATGTGGTTGGAAGTCCCTACTACATTGCGCCTGAAGTTCTGAACAAGAATTACGGTCCAGAAGCAGATATATGGAGCGCAGGTGTGATGATTTACGTGTTACTGTCTGGTTCAGCTCCGTTTTGGGGAGAAACGGAAGAAGAAATCTTCAATGAGGTTCTGGAGGGTGAGCTTGATTTGACATCAGATCCTTGGCCACAAGTCTCTGAAAGCGCAAAAGATTTGATCAGAAAGATGCTTGAAAGAAATCCCATACAAAGACTCACTGCTCAACAAGTATTATGCCATCCATGGATTAGGGATGAAGGAAATGCACCAGATACACCACTTGACACAACTGTGTTGAGTCGCTTGAAGAAGTTTTCAGCAACAGACAAGCTTAAGAAGATGGCTTTAAGGGTGATTGCAGAAAGGCTTTCCGAAGAAGAGATTCACGAGCTCAGAGAAACATTCAAGACTATAGACAGTGGAAAGAGCGGGCGAGTAACTTATAAAGAACTCAAAAACGGTCTTGAAAGATTTAACACAAATCTTGACAACTCTGACATCAATAGTCTTATGCAAATACCAACGGATGTGCACTTGGAAGACACAGTAGACTACAACGAATTCATAGAGGCGATTGTAAGACTGAGACAAATACAAGAAGAGGAAGCAAATGATCGTTTAGAATCATCAACAAAAGTGTAA

Protein Analysis

520

Amino Acids

58.85

Weight (kDa)

5.59

Isoelectric Point (pI)

37.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 132 - 390 4.6e-77 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 134 - 385 3e-25 Protein tyrosine and serine/threonine kinase
EF-hand_7 PF13499 437 - 499 1.1e-06 EF-hand domain pair
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0027300)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G35890 AT2G35890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 396, 1365
AarI CACCTGC 1 cut(s) 944
Acc16I TGCGCA 1 cut(s) 216
Acc36I ACCTGC 2 cut(s) 220, 944
AccBSI CCGCTC 1 cut(s) 1350
AccI GTMKAC 1 cut(s) 1470
AciI CCGC 1 cut(s) 1350
AclWI GGATC 2 cut(s) 93, 1055
AcoI YGGCCR 1 cut(s) 1067
AcsI RAATTY 2 cut(s) 52, 1481
AcuI CTGAAG 1 cut(s) 927
AdeI CACNNNGTG 2 cut(s) 319, 625
AfiI CCNNNNNNNGG 2 cut(s) 375, 998
AflII CTTAAG 2 cut(s) 818, 1253
AflIII ACRYGT 1 cut(s) 969
AgsI TTSAA 8 cut(s) 97, 364, 385, 1024, 1115, 1228, 1327, 1388
AjiI CACGTC 1 cut(s) 520
AjnI CCWGG 2 cut(s) 108, 856
AjuI GAANNNNNNNTTGG 2 cut(s) 545, 577
AleI CACNNNNGTG 1 cut(s) 1211
Alw21I GWGCWC 2 cut(s) 1314, 1455
Alw26I GTCTC 3 cut(s) 319, 1081, 1501
Alw44I GTGCAC 1 cut(s) 1451
AlwI GGATC 2 cut(s) 93, 1055
AlwNI CAGNNNCTG 1 cut(s) 614
AoxI GGCC 1 cut(s) 1067
ApaLI GTGCAC 1 cut(s) 1451
ApeKI GCWGC 1 cut(s) 698
ApoI RAATTY 2 cut(s) 52, 1481
Asp700I GAANNNNTTC 1 cut(s) 1302
AspLEI GCGC 4 cut(s) 217, 904, 953, 1088
AspS9I GGNCC 1 cut(s) 929
AsuHPI GGTGA 5 cut(s) 191, 637, 659, 1052, 1285
AvaII GGWCC 1 cut(s) 929
BaeGI GKGCMC 1 cut(s) 1455
BalI TGGCCA 1 cut(s) 1069
BanII GRGCYC 1 cut(s) 1314
BauI CACGAG 1 cut(s) 1307
BbsI GAAGAC 3 cut(s) 371, 522, 1467
Bbv12I GWGCWC 2 cut(s) 1314, 1455
BbvCI CCTCAGC 1 cut(s) 123
BbvI GCAGC 1 cut(s) 685
BccI CCATC 4 cut(s) 593, 622, 1167, 1255
BcgI CGANNNNNNTGC 2 cut(s) 465, 499
BciT130I CCWGG 2 cut(s) 110, 858
BciVI GTATCC 1 cut(s) 34
BclI TGATCA 1 cut(s) 1098
BcoDI GTCTC 3 cut(s) 319, 1081, 1501
BfaI CTAG 1 cut(s) 503
BfmI CTRYAG 1 cut(s) 1332
BfrI CTTAAG 2 cut(s) 818, 1253
BfuAI ACCTGC 2 cut(s) 220, 944
BfuI GTATCC 1 cut(s) 34
BglII AGATCT 2 cut(s) 73, 766
BisI GCNGC 1 cut(s) 699
BlsI GCNGC 1 cut(s) 700
Bme1390I CCNGG 2 cut(s) 110, 858
Bme18I GGWCC 1 cut(s) 929
BmgBI CACGTC 1 cut(s) 520
BmgT120I GGNCC 1 cut(s) 929
BmrFI CCNGG 2 cut(s) 110, 858
BmsI GCATC 2 cut(s) 747, 1098
BpiI GAAGAC 3 cut(s) 371, 522, 1467
BpmI CTGGAG 3 cut(s) 92, 879, 1055
Bpu10I CCTNAGC 1 cut(s) 123
BpuEI CTTGAG 2 cut(s) 215, 836
BsaAI YACGTR 1 cut(s) 970
BsaBI GATNNNNATC 1 cut(s) 584
BsaJI CCNNGG 2 cut(s) 1064, 1163
BsaXI ACNNNNNCTCC 2 cut(s) 940, 970
Bsc4I CCNNNNNNNGG 2 cut(s) 375, 998
Bse3DI GCAATG 1 cut(s) 897
Bse8I GATNNNNATC 1 cut(s) 584
BseBI CCWGG 2 cut(s) 110, 858
BseDI CCNNGG 2 cut(s) 1064, 1163
BseGI GGATG 7 cut(s) 88, 151, 532, 880, 1159, 1180, 1453
BseJI GATNNNNATC 1 cut(s) 584
BseLI CCNNNNNNNGG 2 cut(s) 375, 998
BseMI GCAATG 1 cut(s) 897
BseMII CTCAG 6 cut(s) 137, 621, 678, 768, 1327, 1496
BseRI GAGGAG 3 cut(s) 111, 337, 657
BseSI GKGCMC 1 cut(s) 1455
BseXI GCAGC 1 cut(s) 685
BsgI GTGCAG 2 cut(s) 274, 357
BshFI GGCC 1 cut(s) 1069
BsiHKAI GWGCWC 2 cut(s) 1314, 1455
BslFI GGGAC 4 cut(s) 51, 249, 445, 873
BslI CCNNNNNNNGG 2 cut(s) 375, 998
BsmAI GTCTC 3 cut(s) 319, 1081, 1501
BsmFI GGGAC 4 cut(s) 51, 249, 445, 873
BsnI GGCC 1 cut(s) 1069
Bsp1286I GDGCHC 2 cut(s) 1314, 1455
Bsp143I GATC 7 cut(s) 73, 85, 579, 766, 1060, 1098, 1534
Bsp19I CCATGG 1 cut(s) 1163
BspACI CCGC 1 cut(s) 1350
BspANI GGCC 1 cut(s) 1069
BspCNI CTCAG 6 cut(s) 136, 620, 679, 769, 1326, 1497
BspMI ACCTGC 2 cut(s) 220, 944
BspPI GGATC 2 cut(s) 93, 1055
BspTI CTTAAG 2 cut(s) 818, 1253
BsrBI CCGCTC 1 cut(s) 1350
BsrDI GCAATG 1 cut(s) 897
BssECI CCNNGG 2 cut(s) 1064, 1163
BssMI GATC 7 cut(s) 73, 85, 579, 766, 1060, 1098, 1534
BssSI CACGAG 1 cut(s) 1307
BssT1I CCWWGG 2 cut(s) 1064, 1163
Bst2BI CACGAG 1 cut(s) 1307
Bst2UI CCWGG 2 cut(s) 110, 858
Bst4CI ACNGT 8 cut(s) 299, 426, 929, 978, 1213, 1340, 1382, 1468
Bst6I CTCTTC 5 cut(s) 258, 488, 529, 1293, 1515
BstAFI CTTAAG 2 cut(s) 818, 1253
BstBAI YACGTR 1 cut(s) 970
BstC8I GCNNGC 3 cut(s) 279, 478, 1352
BstDEI CTNAG 6 cut(s) 123, 607, 687, 777, 1313, 1505
BstDSI CCRYGG 1 cut(s) 1163
BstEII GGTNACC 1 cut(s) 179
BstF5I GGATG 7 cut(s) 88, 151, 532, 880, 1159, 1180, 1453
BstHHI GCGC 4 cut(s) 217, 904, 953, 1088
BstKTI GATC 7 cut(s) 76, 88, 582, 769, 1063, 1101, 1537
BstMAI GTCTC 3 cut(s) 319, 1081, 1501
BstMBI GATC 7 cut(s) 73, 85, 579, 766, 1060, 1098, 1534
BstMWI GCNNNNNNNGC 2 cut(s) 124, 707
BstNI CCWGG 2 cut(s) 110, 858
BstNSI RCATGY 1 cut(s) 480
BstPI GGTNACC 1 cut(s) 179
BstSCI CCNGG 2 cut(s) 108, 856
BstSFI CTRYAG 1 cut(s) 1332
BstSLI GKGCMC 1 cut(s) 1455
BstV1I GCAGC 1 cut(s) 685
BstV2I GAAGAC 3 cut(s) 371, 522, 1467
BstX2I RGATCY 3 cut(s) 73, 766, 1060
BstYI RGATCY 3 cut(s) 73, 766, 1060
BsuI GTATCC 1 cut(s) 34
BsuRI GGCC 1 cut(s) 1069
BtgI CCRYGG 1 cut(s) 1163
BtrI CACGTC 1 cut(s) 520
BtsCI GGATG 7 cut(s) 88, 151, 532, 880, 1159, 1180, 1453
BtsI GCAGTG 2 cut(s) 262, 1137
BtsIMutI CAGTG 5 cut(s) 262, 363, 615, 1137, 1345
BveI ACCTGC 2 cut(s) 220, 944
Cac8I GCNNGC 3 cut(s) 279, 478, 1352
CaiI CAGNNNCTG 1 cut(s) 614
CfoI GCGC 4 cut(s) 217, 904, 953, 1088
Cfr13I GGNCC 1 cut(s) 929
CviAII CATG 7 cut(s) 57, 82, 176, 419, 477, 622, 1164
DdeI CTNAG 6 cut(s) 123, 607, 687, 777, 1313, 1505
DpnI GATC 7 cut(s) 75, 87, 581, 768, 1062, 1100, 1536
DpnII GATC 7 cut(s) 73, 85, 579, 766, 1060, 1098, 1534
DraIII CACNNNGTG 2 cut(s) 319, 625
EaeI YGGCCR 1 cut(s) 1067
Eam1104I CTCTTC 5 cut(s) 258, 488, 529, 1293, 1515
EarI CTCTTC 5 cut(s) 258, 488, 529, 1293, 1515
Ecl136II GAGCTC 1 cut(s) 1312
Eco130I CCWWGG 2 cut(s) 1064, 1163
Eco24I GRGCYC 1 cut(s) 1314
Eco47I GGWCC 1 cut(s) 929
Eco53kI GAGCTC 1 cut(s) 1312
Eco57I CTGAAG 1 cut(s) 927
Eco91I GGTNACC 1 cut(s) 179
EcoICRI GAGCTC 1 cut(s) 1312
EcoO65I GGTNACC 1 cut(s) 179
EcoRI GAATTC 2 cut(s) 52, 1481
EcoRII CCWGG 2 cut(s) 108, 856
EcoT14I CCWWGG 2 cut(s) 1064, 1163
EcoT22I ATGCAT 1 cut(s) 478
EcoT38I GRGCYC 1 cut(s) 1314
ErhI CCWWGG 2 cut(s) 1064, 1163
FaeI CATG 7 cut(s) 60, 85, 179, 422, 480, 625, 1167
FalI AAGNNNNNCTT 2 cut(s) 705, 737
FaqI GGGAC 4 cut(s) 51, 249, 445, 873
FatI CATG 7 cut(s) 56, 81, 175, 418, 476, 621, 1163
FauI CCCGC 1 cut(s) 1343
FauNDI CATATG 1 cut(s) 21
FbaI TGATCA 1 cut(s) 1098
FblI GTMKAC 1 cut(s) 1470
Fnu4HI GCNGC 1 cut(s) 699
FokI GGATG 7 cut(s) 75, 158, 539, 887, 1146, 1187, 1460
FriOI GRGCYC 1 cut(s) 1314
Fsp4HI GCNGC 1 cut(s) 699
FspBI CTAG 1 cut(s) 503
FspI TGCGCA 1 cut(s) 216
GlaI GCGC 4 cut(s) 216, 903, 952, 1087
GluI GCNGC 1 cut(s) 699
GsuI CTGGAG 3 cut(s) 92, 879, 1055
HaeIII GGCC 1 cut(s) 1069
HhaI GCGC 4 cut(s) 217, 904, 953, 1088
Hin1II CATG 7 cut(s) 60, 85, 179, 422, 480, 625, 1167
Hin6I GCGC 4 cut(s) 215, 902, 951, 1086
HinP1I GCGC 4 cut(s) 215, 902, 951, 1086
HincII GTYRAC 2 cut(s) 28, 796
HindII GTYRAC 2 cut(s) 28, 796
HindIII AAGCTT 2 cut(s) 161, 1250
HinfI GANTC 9 cut(s) 229, 353, 487, 605, 809, 1134, 1219, 1303, 1544
HphI GGTGA 5 cut(s) 191, 637, 659, 1052, 1285
Hpy166II GTNNAC 5 cut(s) 28, 619, 796, 1453, 1471
Hpy188III TCNNGA 6 cut(s) 932, 1034, 1307, 1327, 1385, 1406
Hpy8I GTNNAC 5 cut(s) 28, 619, 796, 1453, 1471
HpyAV CCTTC 3 cut(s) 240, 379, 1172
HpyCH4III ACNGT 8 cut(s) 299, 426, 929, 978, 1213, 1340, 1382, 1468
HpyCH4IV ACGT 3 cut(s) 437, 519, 969
HpyCH4V TGCA 9 cut(s) 255, 338, 476, 480, 760, 1187, 1280, 1435, 1453
HpyF10VI GCNNNNNNNGC 2 cut(s) 124, 707
HpyF3I CTNAG 6 cut(s) 123, 607, 687, 777, 1313, 1505
HpySE526I ACGT 3 cut(s) 437, 519, 969
Hsp92II CATG 7 cut(s) 60, 85, 179, 422, 480, 625, 1167
HspAI GCGC 4 cut(s) 215, 902, 951, 1086
Ksp22I TGATCA 1 cut(s) 1098
Kzo9I GATC 7 cut(s) 73, 85, 579, 766, 1060, 1098, 1534
LmnI GCTCC 4 cut(s) 593, 631, 948, 994
Lsp1109I GCAGC 1 cut(s) 685
LweI GCATC 2 cut(s) 747, 1098
MaeI CTAG 1 cut(s) 503
MaeII ACGT 3 cut(s) 437, 519, 969
MaeIII GTNAC 4 cut(s) 179, 257, 972, 1357
MalI GATC 7 cut(s) 75, 87, 581, 768, 1062, 1100, 1536
MbiI CCGCTC 1 cut(s) 1350
MboI GATC 7 cut(s) 73, 85, 579, 766, 1060, 1098, 1534
MfeI CAATTG 1 cut(s) 31
MflI RGATCY 3 cut(s) 73, 766, 1060
MhlI GDGCHC 2 cut(s) 1314, 1455
MlsI TGGCCA 1 cut(s) 1069
MluCI AATT 5 cut(s) 31, 52, 188, 922, 1481
MluNI TGGCCA 1 cut(s) 1069
MlyI GAGTC 5 cut(s) 238, 362, 599, 1128, 1228
MmeI TCCRAC 1 cut(s) 862
Mox20I TGGCCA 1 cut(s) 1069
Mph1103I ATGCAT 1 cut(s) 478
MroXI GAANNNNTTC 1 cut(s) 1302
MscI TGGCCA 1 cut(s) 1069
MseI TTAA 6 cut(s) 165, 771, 819, 1254, 1268, 1395
MslI CAYNNNNRTG 2 cut(s) 626, 1211
Msp20I TGGCCA 1 cut(s) 1069
MspCI CTTAAG 2 cut(s) 818, 1253
MspR9I CCNGG 2 cut(s) 110, 858
MunI CAATTG 1 cut(s) 31
MvaI CCWGG 2 cut(s) 110, 858
MwoI GCNNNNNNNGC 2 cut(s) 124, 707
NcoI CCATGG 1 cut(s) 1163
NdeI CATATG 1 cut(s) 21
NdeII GATC 7 cut(s) 73, 85, 579, 766, 1060, 1098, 1534
NlaIII CATG 7 cut(s) 60, 85, 179, 422, 480, 625, 1167
NmuCI GTSAC 2 cut(s) 179, 257
NsbI TGCGCA 1 cut(s) 216
NsiI ATGCAT 1 cut(s) 478
NspI RCATGY 1 cut(s) 480
OliI CACNNNNGTG 1 cut(s) 1211
PaeI GCATGC 1 cut(s) 480
PaqCI CACCTGC 1 cut(s) 944
PcsI WCGNNNNNNNCGW 1 cut(s) 516
PdmI GAANNNNTTC 1 cut(s) 1302
PfeI GAWTC 4 cut(s) 487, 809, 1303, 1544
PfoI TCCNGGA 1 cut(s) 108
PkrI GCNGC 1 cut(s) 700
PleI GAGTC 5 cut(s) 237, 361, 599, 1128, 1227
PpsI GAGTC 5 cut(s) 237, 361, 599, 1128, 1227
Ppu21I YACGTR 1 cut(s) 970
PsiI TTATAA 2 cut(s) 396, 1365
Psp124BI GAGCTC 1 cut(s) 1314
Psp6I CCWGG 2 cut(s) 108, 856
PspEI GGTNACC 1 cut(s) 179
PspGI CCWGG 2 cut(s) 108, 856
PspPI GGNCC 1 cut(s) 929
PsrI GAACNNNNNNTAC 2 cut(s) 908, 940
PstNI CAGNNNCTG 1 cut(s) 614
PsuI RGATCY 3 cut(s) 73, 766, 1060
RseI CAYNNNNRTG 2 cut(s) 626, 1211
SacI GAGCTC 1 cut(s) 1314
SaqAI TTAA 6 cut(s) 165, 771, 819, 1254, 1268, 1395
SatI GCNGC 1 cut(s) 699
Sau3AI GATC 7 cut(s) 73, 85, 579, 766, 1060, 1098, 1534
Sau96I GGNCC 1 cut(s) 929
SchI GAGTC 5 cut(s) 238, 362, 599, 1128, 1228
ScrFI CCNGG 2 cut(s) 110, 858
SduI GDGCHC 2 cut(s) 1314, 1455
SfaNI GCATC 2 cut(s) 747, 1098
SfcI CTRYAG 1 cut(s) 1332
SinI GGWCC 1 cut(s) 929
SmiMI CAYNNNNRTG 2 cut(s) 626, 1211
SmlI CTYRAG 4 cut(s) 194, 818, 851, 1253
SmoI CTYRAG 4 cut(s) 194, 818, 851, 1253
SphI GCATGC 1 cut(s) 480
Sse9I AATT 5 cut(s) 31, 52, 188, 922, 1481
SsiI CCGC 1 cut(s) 1350
SspI AATATT 1 cut(s) 392
SspMI CTAG 1 cut(s) 503
SstI GAGCTC 1 cut(s) 1314
StyD4I CCNGG 2 cut(s) 108, 856
StyI CCWWGG 2 cut(s) 1064, 1163
TaaI ACNGT 8 cut(s) 299, 426, 929, 978, 1213, 1340, 1382, 1468
TaiI ACGT 3 cut(s) 440, 522, 972
TaqI TCGA 2 cut(s) 50, 485
TasI AATT 5 cut(s) 31, 52, 188, 922, 1481
TfiI GAWTC 4 cut(s) 487, 809, 1303, 1544
Tru1I TTAA 6 cut(s) 165, 771, 819, 1254, 1268, 1395
Tru9I TTAA 6 cut(s) 165, 771, 819, 1254, 1268, 1395
TscAI CASTG 5 cut(s) 262, 363, 615, 1144, 1345
TseFI GTSAC 2 cut(s) 179, 257
TseI GCWGC 1 cut(s) 698
Tsp45I GTSAC 2 cut(s) 179, 257
TspDTI ATGAA 6 cut(s) 8, 45, 152, 566, 1191, 1474
TspGWI ACGGA 4 cut(s) 887, 981, 1022, 1460
TspRI CASTG 5 cut(s) 262, 363, 615, 1144, 1345
Vha464I CTTAAG 2 cut(s) 818, 1253
VneI GTGCAC 1 cut(s) 1451
VpaK11BI GGWCC 1 cut(s) 929
XapI RAATTY 2 cut(s) 52, 1481
XceI RCATGY 1 cut(s) 480
XmiI GTMKAC 1 cut(s) 1470
XmnI GAANNNNTTC 1 cut(s) 1302
XspI CTAG 1 cut(s) 503
Zsp2I ATGCAT 1 cut(s) 478
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.