AT2G42640

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0021964
Physical Location & Seq
Reverse (-)
17758532 .. 17764185
5654 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G42640.2

Sequence Viewer

Length: 2346 bp
ATGGGAGCTAAGTGTTGCAGAGGTCACCGAGGATCAGTGGTGGAATCAAATGGTTCCGTGATCTTGTCGTTAGCTGACCTAGAGGTCCAAGCTACTGACCTTAGGGAGATGACTGTGGTAGAGGCAAGAGATGCTGCTGGACCATCAGAACCAAGACCTCCAAGTCCTACCTTGAGGCCTTCAGAAGTTGAGGAGACATCCGAGCCTGTATGTCAGGGATCACTAGTAGAAACCTCTAATACTGATGATGCTGGACCATCAGAACCAAATCCACCAAGTCCTACCTTGAGGCCTTCAGAAGTTGAGAAGATATACGTGCCTGTATGTCAGGGATCACTAGCAGAAACCTCTAATCTTGATCAAGATGGGGTGTCAAGTTATGAAGCATCGAATATTTTTTGGAGTACTGGGTCCTTATCAGACCCGATCCCAAGTGGTTTTTACACTGTGATCCCGGTTGAGAGATTGATGCATTTTAAAAGCATTCCTACATTGGAAGAAATTAATGCGCTGGGGGAAGATCGTCTTAAGGCTGATGCGATTTTTGTAGATCTTAAGAACGATATACAGCTTGTTTTGATAAAGGAGTTTGTCATCAAACTTGTCACAGGATTGGACTCCGATAAAGTTATTAAGAAAATTGCTGGACTGGTGGCAAATATATATAAAAGAAAAACTCTGCAGAGTCCGGCAAGAACGCTGCAATATTTTGACGTTCAAGGGTTTACCCTGCTAGGACAAATCAAGCATGGTTCTTGTCGTGCACGAGCAATCCTCTTTAAAGTTCTAGCTGATGCTGTTGGTCTTGACAGTAAGCTTGTAATGGGTTTCCCTACTGATCTGAGATTTTCTGCTAGCATCGACTCATATAATCATATCTCTGCTGTGGTTGAGCTCAATAATGTTGAAATGCTAGTCGACCTTAAGCGATGTCCTGGTCAGCTTAAACCCTTCTCACCCAAGGCAGTTTATATGGCTCATATCTCAATGGCATGGCAGCCTGATTTTGTAGACAATAACCCTTGTGCTTCACCATTGGAGCCAAACAGTCCCATGGAACGGTCTGGTCCACCATCTGCATTACAATCCGGTTTAAGTCGTTCACTAGGCGAGCCAAACATAGCTACTGAAGTTTTGCGGAGAAAGGTCATCAAGGAACCGCCACCTGCTGATTTCAGTGGTAACTCAGGAGCAGCGGAATCGGAAAGTAAGAGAACAAATGGAAGGTGTATGAATACTCCTGATCTAAACAATGACATTGCCAGGGCAACAATGATGCAGAGTGACCTCTTGAAAGAGCGAGGTGTTGATGATTCATCTCCTTACTCTCCAGATGAAAAGAATGTCTCTGGTTTCCAGCTTGATTCCCATGACCTAGTGTCTGGTGAATGTTCGACAGTATATCCGCGGAAGTCAATATCATTGCCGTCATCTCCGCGAAGCTATCAAATTCAATTATCTGAAAGAAGTGAACATTCACCTCAAGAAATAAGCCACATTTGGAATGAAGTGCTGGAGTCTCCAATGTTCCAGAATAAACCTTTGTTACCATTTGAAGAATGGAACATAGATTTCTCCAAGTTGAAAGTTGGGGCTTCTGTTGGGAGTGGAACTTCTGGAGTAGTATGTCGTGGCGTCTGGAATAAAACTGAAGTTGCGATCAAGATATTTCTTGGACAACAGCTTACAGCTGAGAACATGAAAGTTTTCTGCAATGAGATATCTATTCTTAGCCGTCTTCAACATCCCAATGTTATTCTGCTCCTTGGAGCATGCACAAAGCCTCCTCAGTTATCACTGGTCACAGAGTATATGAGTACGGGGTCCTTGTATGATGTGATCCGTACCAGAAAAAAGGAGTTGAGCTGGCAAAGGAAACTAAAGATTCTGGCTGAAATTTGCAGGGGTTTGATGTACATACACAAGATGGGGATAGTCCACCGTGATCTAACCAGTGCGAACTGCCTGTTAAACAAGTCGATAGTCAAGATCTGTGATTTTGGGCTCTCGAGAAGGATGACAGGTACGGCAGTGAAAGATACTGAAGCTGCAGGAACTCCTGAGTGGATGGCTCCTGAACTTATCCGCAATGAACCCGTCACAGAAAAAAGCGACATCTTTAGCTTTGGTGTTATAATGTGGGAACTTAGCACTCTATCCAAGCCCTGGAAAGGAGTCCCAAAAGAAAAAGTCATTCATATCGTTGCAAACGAAGGAGCCCGGCTCAAAATACCTGAAGGACCACTACAGAAGCTTATTGCAGATTGTTGGTCGGAACCAGAGCAAAGGCCGAGCTGTAAAGAGATACTGCACCGTCTTAAGACCTGCGAGATTCCGATTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
ko04010 ko04013 ko04064 ko04140 ko04152 ko04214 ko04310 ko04380 ko04520 ko04620 ko04621 ko04622 ko04624 ko04657 ko04660 ko04668 ko05140 ko05145 ko05162 ko05168 ko05169 ko05418 map04010 map04013 map04064 map04140 map04152 map04214 map04310 map04380 map04520 map04620 map04621 map04622 map04624 map04657 map04660 map04668 map05140 map05145 map05162 map05168 map05169 map05418
Pfam Domains
Protein Families
EDR1 Pkinase_Tyr

Protein Analysis

781

Amino Acids

86.07

Weight (kDa)

5.94

Isoelectric Point (pI)

52.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EDR1_CTR1_ARMC3_pept PF14381 126 - 315 8.6e-47 EDR1/CTR1/ARMC3, peptidase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0021964)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G42640 AT2G42640 AT2G42640 AT2G42640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2135
AarI CACCTGC 1 cut(s) 1174
AasI GACNNNNNNGTC 2 cut(s) 83, 162
Acc36I ACCTGC 2 cut(s) 1174, 2333
AccB7I CCANNNNNTGG 1 cut(s) 2166
AccI GTMKAC 2 cut(s) 918, 1011
AccII CGCG 2 cut(s) 1408, 1438
AciI CCGC 7 cut(s) 1138, 1160, 1196, 1406, 1408, 1436, 2086
AclWI GGATC 6 cut(s) 40, 226, 340, 421, 445, 1834
AcsI RAATTY 2 cut(s) 1449, 1896
AcuI CTGAAG 6 cut(s) 165, 279, 1149, 1671, 2064, 2256
AcyI GRCGYC 1 cut(s) 1635
AfaI GTAC 5 cut(s) 406, 1819, 1846, 1916, 2026
AfiI CCNNNNNNNGG 3 cut(s) 1059, 2166, 2171
AflII CTTAAG 4 cut(s) 527, 554, 923, 2318
AgsI TTSAA 7 cut(s) 719, 908, 1294, 1454, 1556, 1585, 1742
AhdI GACNNNNNGTC 1 cut(s) 1378
AhlI ACTAGT 1 cut(s) 223
AjnI CCWGG 3 cut(s) 934, 1262, 2165
Alw21I GWGCWC 2 cut(s) 766, 897
Alw26I GTCTC 3 cut(s) 188, 1351, 1524
Alw44I GTGCAC 1 cut(s) 762
AlwI GGATC 6 cut(s) 40, 226, 340, 421, 445, 1834
Ama87I CYCGRG 1 cut(s) 2008
AoxI GGCC 3 cut(s) 176, 290, 2288
ApaLI GTGCAC 1 cut(s) 762
ApeKI GCWGC 5 cut(s) 134, 700, 997, 1193, 2048
ApoI RAATTY 2 cut(s) 1449, 1896
AseI ATTAAT 1 cut(s) 504
Asp700I GAANNNNTTC 1 cut(s) 1706
AspLEI GCGC 1 cut(s) 511
AspS9I GGNCC 7 cut(s) 85, 140, 254, 411, 1067, 1824, 2240
AsuC2I CCSGG 2 cut(s) 455, 2221
AsuHPI GGTGA 5 cut(s) 17, 948, 1023, 1397, 1470
AsuNHI GCTAGC 1 cut(s) 854
AvaI CYCGRG 1 cut(s) 2008
AvaII GGWCC 7 cut(s) 85, 140, 254, 411, 1067, 1824, 2240
AxyI CCTNAGG 1 cut(s) 101
BaeGI GKGCMC 1 cut(s) 766
BaeI ACNNNNGTAYC 2 cut(s) 2016, 2049
BanII GRGCYC 3 cut(s) 897, 2007, 2221
BarI GAAGNNNNNNTAC 2 cut(s) 2229, 2261
BauI CACGAG 1 cut(s) 765
BbsI GAAGAC 1 cut(s) 1730
Bbv12I GWGCWC 2 cut(s) 766, 897
BbvI GCAGC 5 cut(s) 121, 687, 1009, 1205, 2035
BccI CCATC 6 cut(s) 151, 265, 359, 1081, 1921, 2062
BceAI ACGGC 3 cut(s) 1411, 1719, 2043
BcgI CGANNNNNNTGC 2 cut(s) 1182, 1216
BciT130I CCWGG 3 cut(s) 936, 1264, 2167
BclI TGATCA 1 cut(s) 358
BcnI CCSGG 2 cut(s) 455, 2221
BcoDI GTCTC 3 cut(s) 188, 1351, 1524
BcuI ACTAGT 1 cut(s) 223
BfaI CTAG 9 cut(s) 80, 224, 338, 734, 788, 855, 914, 1106, 1376
BfmI CTRYAG 3 cut(s) 680, 2049, 2246
BfrI CTTAAG 4 cut(s) 527, 554, 923, 2318
BfuAI ACCTGC 2 cut(s) 1174, 2333
BglII AGATCT 2 cut(s) 550, 1989
BisI GCNGC 5 cut(s) 135, 701, 998, 1194, 2049
BlsI GCNGC 5 cut(s) 136, 702, 999, 1195, 2050
BmcAI AGTACT 1 cut(s) 406
Bme1390I CCNGG 5 cut(s) 455, 936, 1264, 2167, 2221
Bme18I GGWCC 7 cut(s) 85, 140, 254, 411, 1067, 1824, 2240
BmeRI GACNNNNNGTC 1 cut(s) 1378
BmeT110I CYCGRG 1 cut(s) 2008
BmgT120I GGNCC 7 cut(s) 85, 140, 254, 411, 1067, 1824, 2240
BmiI GGNNCC 8 cut(s) 55, 412, 1041, 1158, 1825, 2073, 2218, 2277
BmrFI CCNGG 5 cut(s) 455, 936, 1264, 2167, 2221
BmrI ACTGGG 1 cut(s) 417
BmsI GCATC 8 cut(s) 121, 238, 395, 459, 526, 784, 867, 1266
BmtI GCTAGC 1 cut(s) 858
BmuI ACTGGG 1 cut(s) 417
BpiI GAAGAC 1 cut(s) 1730
BplI GAGNNNNNCTC 4 cut(s) 759, 791, 2208, 2240
BpmI CTGGAG 3 cut(s) 1314, 1535, 1638
BpuEI CTTGAG 3 cut(s) 193, 307, 1467
BpuMI CCSGG 2 cut(s) 455, 2221
BsaAI YACGTR 1 cut(s) 316
BsaHI GRCGYC 1 cut(s) 1635
BsaJI CCNNGG 7 cut(s) 28, 960, 1053, 1263, 1406, 1765, 2165
BsaWI WCCGGW 1 cut(s) 1088
BsaXI ACNNNNNCTCC 2 cut(s) 1768, 1798
Bsc4I CCNNNNNNNGG 3 cut(s) 1059, 2166, 2171
Bse1I ACTGG 4 cut(s) 412, 654, 1803, 1953
Bse21I CCTNAGG 1 cut(s) 101
Bse3DI GCAATG 4 cut(s) 1257, 1421, 1720, 2095
BseBI CCWGG 3 cut(s) 936, 1264, 2167
BseDI CCNNGG 7 cut(s) 28, 960, 1053, 1263, 1406, 1765, 2165
BseGI GGATG 4 cut(s) 197, 1744, 2022, 2073
BseLI CCNNNNNNNGG 3 cut(s) 1059, 2166, 2171
BseMI GCAATG 4 cut(s) 1257, 1421, 1720, 2095
BseMII CTCAG 5 cut(s) 833, 1200, 1683, 1802, 2052
BseNI ACTGG 4 cut(s) 412, 654, 1803, 1953
BseRI GAGGAG 2 cut(s) 206, 1776
BseSI GKGCMC 1 cut(s) 766
BseXI GCAGC 5 cut(s) 121, 687, 1009, 1205, 2035
BseYI CCCAGC 1 cut(s) 511
BsgI GTGCAG 1 cut(s) 2294
Bsh1236I CGCG 2 cut(s) 1408, 1438
BshFI GGCC 3 cut(s) 178, 292, 2290
BsiHKAI GWGCWC 2 cut(s) 766, 897
BsiHKCI CYCGRG 1 cut(s) 2008
BsiSI CCGG 4 cut(s) 455, 689, 1089, 2221
BslFI GGGAC 2 cut(s) 1035, 2162
BslI CCNNNNNNNGG 3 cut(s) 1059, 2166, 2171
BsmAI GTCTC 3 cut(s) 188, 1351, 1524
BsmFI GGGAC 2 cut(s) 1035, 2162
BsmI GAATGC 1 cut(s) 483
BsnI GGCC 3 cut(s) 178, 292, 2290
BsoBI CYCGRG 1 cut(s) 2008
Bsp1286I GDGCHC 4 cut(s) 766, 897, 2007, 2221
Bsp1407I TGTACA 1 cut(s) 1914
Bsp19I CCATGG 1 cut(s) 1053
BspACI CCGC 7 cut(s) 1138, 1160, 1196, 1406, 1408, 1436, 2086
BspANI GGCC 3 cut(s) 178, 292, 2290
BspCNI CTCAG 5 cut(s) 834, 1199, 1684, 1801, 2053
BspFNI CGCG 2 cut(s) 1408, 1438
BspLI GGNNCC 8 cut(s) 55, 412, 1041, 1158, 1825, 2073, 2218, 2277
BspMAI CTGCAG 2 cut(s) 684, 2053
BspMI ACCTGC 2 cut(s) 1174, 2333
BspOI GCTAGC 1 cut(s) 858
BspPI GGATC 6 cut(s) 40, 226, 340, 421, 445, 1834
BspTI CTTAAG 4 cut(s) 527, 554, 923, 2318
BsrDI GCAATG 4 cut(s) 1257, 1421, 1720, 2095
BsrGI TGTACA 1 cut(s) 1914
BsrI ACTGG 4 cut(s) 412, 654, 1803, 1953
BssECI CCNNGG 7 cut(s) 28, 960, 1053, 1263, 1406, 1765, 2165
BssNI GRCGYC 1 cut(s) 1635
BssSI CACGAG 1 cut(s) 765
BssT1I CCWWGG 3 cut(s) 960, 1053, 1765
Bst2BI CACGAG 1 cut(s) 765
Bst2UI CCWGG 3 cut(s) 936, 1264, 2167
Bst4CI ACNGT 8 cut(s) 115, 448, 812, 1049, 1062, 1399, 1943, 2315
BstACI GRCGYC 1 cut(s) 1635
BstAFI CTTAAG 4 cut(s) 527, 554, 923, 2318
BstAPI GCANNNNNTGC 1 cut(s) 131
BstAUI TGTACA 1 cut(s) 1914
BstBAI YACGTR 1 cut(s) 316
BstC8I GCNNGC 4 cut(s) 856, 1112, 1774, 1868
BstDEI CTNAG 9 cut(s) 9, 101, 842, 1186, 1692, 1730, 1788, 2061, 2147
BstDSI CCRYGG 2 cut(s) 1053, 1406
BstEII GGTNACC 1 cut(s) 23
BstF5I GGATG 4 cut(s) 197, 1744, 2022, 2073
BstFNI CGCG 2 cut(s) 1408, 1438
BstHHI GCGC 1 cut(s) 511
BstMAI GTCTC 3 cut(s) 188, 1351, 1524
BstMWI GCNNNNNNNGC 1 cut(s) 131
BstNI CCWGG 3 cut(s) 936, 1264, 2167
BstNSI RCATGY 1 cut(s) 1776
BstPI GGTNACC 1 cut(s) 23
BstSCI CCNGG 5 cut(s) 453, 934, 1262, 2165, 2219
BstSFI CTRYAG 3 cut(s) 680, 2049, 2246
BstSLI GKGCMC 1 cut(s) 766
BstUI CGCG 2 cut(s) 1408, 1438
BstV1I GCAGC 5 cut(s) 121, 687, 1009, 1205, 2035
BstV2I GAAGAC 1 cut(s) 1730
BstX2I RGATCY 2 cut(s) 550, 1989
BstYI RGATCY 2 cut(s) 550, 1989
Bsu36I CCTNAGG 1 cut(s) 101
BsuRI GGCC 3 cut(s) 178, 292, 2290
BtgI CCRYGG 2 cut(s) 1053, 1406
BtgZI GCGATG 1 cut(s) 943
BtsCI GGATG 4 cut(s) 197, 1744, 2022, 2073
BtsI GCAGTG 1 cut(s) 2037
BtsIMutI CAGTG 6 cut(s) 42, 444, 1183, 1796, 1960, 2037
BveI ACCTGC 2 cut(s) 1174, 2333
Cac8I GCNNGC 4 cut(s) 856, 1112, 1774, 1868
CfoI GCGC 1 cut(s) 511
Cfr13I GGNCC 7 cut(s) 85, 140, 254, 411, 1067, 1824, 2240
Cfr42I CCGCGG 1 cut(s) 1409
CseI GACGC 1 cut(s) 1624
Csp6I GTAC 5 cut(s) 405, 1818, 1845, 1915, 2025
CviAII CATG 6 cut(s) 749, 993, 1054, 1370, 1699, 1773
CviQI GTAC 5 cut(s) 405, 1818, 1845, 1915, 2025
DdeI CTNAG 9 cut(s) 9, 101, 842, 1186, 1692, 1730, 1788, 2061, 2147
DraI TTTAAA 2 cut(s) 478, 781
DrdI GACNNNNNNGTC 2 cut(s) 83, 162
DriI GACNNNNNGTC 1 cut(s) 1378
DseDI GACNNNNNNGTC 2 cut(s) 83, 162
Eam1105I GACNNNNNGTC 1 cut(s) 1378
Ecl136II GAGCTC 1 cut(s) 895
Eco130I CCWWGG 3 cut(s) 960, 1053, 1765
Eco147I AGGCCT 2 cut(s) 178, 292
Eco24I GRGCYC 3 cut(s) 897, 2007, 2221
Eco32I GATATC 1 cut(s) 1722
Eco47I GGWCC 7 cut(s) 85, 140, 254, 411, 1067, 1824, 2240
Eco53kI GAGCTC 1 cut(s) 895
Eco57I CTGAAG 6 cut(s) 165, 279, 1149, 1671, 2064, 2256
Eco81I CCTNAGG 1 cut(s) 101
Eco88I CYCGRG 1 cut(s) 2008
Eco91I GGTNACC 1 cut(s) 23
EcoICRI GAGCTC 1 cut(s) 895
EcoO109I RGGNCCY 2 cut(s) 411, 1824
EcoO65I GGTNACC 1 cut(s) 23
EcoRII CCWGG 3 cut(s) 934, 1262, 2165
EcoRV GATATC 1 cut(s) 1722
EcoT14I CCWWGG 3 cut(s) 960, 1053, 1765
EcoT22I ATGCAT 1 cut(s) 474
EcoT38I GRGCYC 3 cut(s) 897, 2007, 2221
ErhI CCWWGG 3 cut(s) 960, 1053, 1765
FaeI CATG 6 cut(s) 752, 996, 1057, 1373, 1702, 1776
FalI AAGNNNNNCTT 2 cut(s) 510, 542
FaqI GGGAC 2 cut(s) 1035, 2162
FatI CATG 6 cut(s) 748, 992, 1053, 1369, 1698, 1772
FbaI TGATCA 1 cut(s) 358
FblI GTMKAC 2 cut(s) 918, 1011
Fnu4HI GCNGC 5 cut(s) 135, 701, 998, 1194, 2049
FokI GGATG 4 cut(s) 184, 1731, 2029, 2080
FriOI GRGCYC 3 cut(s) 897, 2007, 2221
Fsp4HI GCNGC 5 cut(s) 135, 701, 998, 1194, 2049
FspBI CTAG 9 cut(s) 80, 224, 338, 734, 788, 855, 914, 1106, 1376
GlaI GCGC 1 cut(s) 510
GluI GCNGC 5 cut(s) 135, 701, 998, 1194, 2049
GsaI CCCAGC 1 cut(s) 515
GsuI CTGGAG 3 cut(s) 1314, 1535, 1638
HaeIII GGCC 3 cut(s) 178, 292, 2290
HapII CCGG 4 cut(s) 455, 689, 1089, 2221
HgaI GACGC 1 cut(s) 1624
HhaI GCGC 1 cut(s) 511
Hin1I GRCGYC 1 cut(s) 1635
Hin1II CATG 6 cut(s) 752, 996, 1057, 1373, 1702, 1776
Hin6I GCGC 1 cut(s) 509
HinP1I GCGC 1 cut(s) 509
HincII GTYRAC 1 cut(s) 919
HindII GTYRAC 1 cut(s) 919
HindIII AAGCTT 2 cut(s) 815, 2252
HpaII CCGG 4 cut(s) 455, 689, 1089, 2221
HphI GGTGA 5 cut(s) 17, 948, 1023, 1397, 1470
Hpy166II GTNNAC 8 cut(s) 726, 764, 919, 1012, 1070, 1103, 1472, 1939
Hpy8I GTNNAC 8 cut(s) 726, 764, 919, 1012, 1070, 1103, 1472, 1939
HpyAV CCTTC 7 cut(s) 189, 303, 961, 1218, 2007, 2207, 2231
HpyCH4III ACNGT 8 cut(s) 115, 448, 812, 1049, 1062, 1399, 1943, 2315
HpyCH4IV ACGT 2 cut(s) 315, 714
HpyF10VI GCNNNNNNNGC 1 cut(s) 131
HpyF3I CTNAG 9 cut(s) 9, 101, 842, 1186, 1692, 1730, 1788, 2061, 2147
HpySE526I ACGT 2 cut(s) 315, 714
Hsp92I GRCGYC 1 cut(s) 1635
Hsp92II CATG 6 cut(s) 752, 996, 1057, 1373, 1702, 1776
HspAI GCGC 1 cut(s) 509
Ksp22I TGATCA 1 cut(s) 358
KspI CCGCGG 1 cut(s) 1409
LmnI GCTCC 7 cut(s) 5, 1039, 1190, 1767, 1769, 2077, 2216
Lsp1109I GCAGC 5 cut(s) 121, 687, 1009, 1205, 2035
LweI GCATC 8 cut(s) 121, 238, 395, 459, 526, 784, 867, 1266
MaeI CTAG 9 cut(s) 80, 224, 338, 734, 788, 855, 914, 1106, 1376
MaeII ACGT 2 cut(s) 315, 714
MaeIII GTNAC 7 cut(s) 23, 604, 1181, 1283, 1545, 1801, 2098
MboII GAAGA 5 cut(s) 319, 509, 530, 1568, 1730
MflI RGATCY 2 cut(s) 550, 1989
MhlI GDGCHC 4 cut(s) 766, 897, 2007, 2221
MluCI AATT 5 cut(s) 501, 639, 1449, 1454, 1896
MlyI GAGTC 5 cut(s) 611, 694, 857, 1526, 2184
MmeI TCCRAC 1 cut(s) 2253
Mph1103I ATGCAT 1 cut(s) 474
MroXI GAANNNNTTC 1 cut(s) 1706
MslI CAYNNNNRTG 1 cut(s) 1749
MspA1I CMGCKG 3 cut(s) 1196, 1408, 1691
MspCI CTTAAG 4 cut(s) 527, 554, 923, 2318
MspI CCGG 4 cut(s) 455, 689, 1089, 2221
MspR9I CCNGG 5 cut(s) 455, 936, 1264, 2167, 2221
Mva1269I GAATGC 1 cut(s) 483
MvaI CCWGG 3 cut(s) 936, 1264, 2167
MvnI CGCG 2 cut(s) 1408, 1438
MwoI GCNNNNNNNGC 1 cut(s) 131
NciI CCSGG 2 cut(s) 455, 2221
NcoI CCATGG 1 cut(s) 1053
NheI GCTAGC 1 cut(s) 854
NlaIII CATG 6 cut(s) 752, 996, 1057, 1373, 1702, 1776
NlaIV GGNNCC 8 cut(s) 55, 412, 1041, 1158, 1825, 2073, 2218, 2277
NmeAIII GCCGAG 1 cut(s) 2316
NmuCI GTSAC 5 cut(s) 23, 604, 1283, 1801, 2098
NsiI ATGCAT 1 cut(s) 474
NspI RCATGY 1 cut(s) 1776
PaeI GCATGC 1 cut(s) 1776
PaeR7I CTCGAG 1 cut(s) 2008
PaqCI CACCTGC 1 cut(s) 1174
PceI AGGCCT 2 cut(s) 178, 292
PcsI WCGNNNNNNNCGW 1 cut(s) 2208
PctI GAATGC 1 cut(s) 483
PdmI GAANNNNTTC 1 cut(s) 1706
PfeI GAWTC 6 cut(s) 44, 1199, 1313, 1364, 1885, 2332
PflMI CCANNNNNTGG 1 cut(s) 2166
PkrI GCNGC 5 cut(s) 136, 702, 999, 1195, 2050
PleI GAGTC 5 cut(s) 611, 693, 857, 1525, 2183
PpsI GAGTC 5 cut(s) 611, 693, 857, 1525, 2183
Ppu21I YACGTR 1 cut(s) 316
PpuMI RGGWCCY 2 cut(s) 411, 1824
PshBI ATTAAT 1 cut(s) 504
PsiI TTATAA 1 cut(s) 2135
Psp124BI GAGCTC 1 cut(s) 897
Psp5II RGGWCCY 2 cut(s) 411, 1824
Psp6I CCWGG 3 cut(s) 934, 1262, 2165
PspEI GGTNACC 1 cut(s) 23
PspFI CCCAGC 1 cut(s) 511
PspGI CCWGG 3 cut(s) 934, 1262, 2165
PspN4I GGNNCC 8 cut(s) 55, 412, 1041, 1158, 1825, 2073, 2218, 2277
PspPI GGNCC 7 cut(s) 85, 140, 254, 411, 1067, 1824, 2240
PspPPI RGGWCCY 2 cut(s) 411, 1824
PstI CTGCAG 2 cut(s) 684, 2053
PsuI RGATCY 2 cut(s) 550, 1989
PvuII CAGCTG 1 cut(s) 1691
RsaI GTAC 5 cut(s) 406, 1819, 1846, 1916, 2026
RsaNI GTAC 5 cut(s) 405, 1818, 1845, 1915, 2025
RseI CAYNNNNRTG 1 cut(s) 1749
SacI GAGCTC 1 cut(s) 897
SacII CCGCGG 1 cut(s) 1409
SalI GTCGAC 1 cut(s) 917
SatI GCNGC 5 cut(s) 135, 701, 998, 1194, 2049
Sau96I GGNCC 7 cut(s) 85, 140, 254, 411, 1067, 1824, 2240
ScaI AGTACT 1 cut(s) 406
SchI GAGTC 5 cut(s) 611, 694, 857, 1526, 2184
ScrFI CCNGG 5 cut(s) 455, 936, 1264, 2167, 2221
SduI GDGCHC 4 cut(s) 766, 897, 2007, 2221
SfaNI GCATC 8 cut(s) 121, 238, 395, 459, 526, 784, 867, 1266
SfcI CTRYAG 3 cut(s) 680, 2049, 2246
Sfr274I CTCGAG 1 cut(s) 2008
Sfr303I CCGCGG 1 cut(s) 1409
SgrBI CCGCGG 1 cut(s) 1409
SinI GGWCC 7 cut(s) 85, 140, 254, 411, 1067, 1824, 2240
SlaI CTCGAG 1 cut(s) 2008
SmiMI CAYNNNNRTG 1 cut(s) 1749
SmlI CTYRAG 8 cut(s) 172, 286, 527, 554, 923, 1482, 2008, 2318
SmoI CTYRAG 8 cut(s) 172, 286, 527, 554, 923, 1482, 2008, 2318
SpeI ACTAGT 1 cut(s) 223
SphI GCATGC 1 cut(s) 1776
Sse9I AATT 5 cut(s) 501, 639, 1449, 1454, 1896
SseBI AGGCCT 2 cut(s) 178, 292
SsiI CCGC 7 cut(s) 1138, 1160, 1196, 1406, 1408, 1436, 2086
SspI AATATT 2 cut(s) 394, 707
SspMI CTAG 9 cut(s) 80, 224, 338, 734, 788, 855, 914, 1106, 1376
SstI GAGCTC 1 cut(s) 897
StuI AGGCCT 2 cut(s) 178, 292
StyD4I CCNGG 5 cut(s) 453, 934, 1262, 2165, 2219
StyI CCWWGG 3 cut(s) 960, 1053, 1765
TaaI ACNGT 8 cut(s) 115, 448, 812, 1049, 1062, 1399, 1943, 2315
TaiI ACGT 2 cut(s) 318, 717
TaqI TCGA 6 cut(s) 389, 861, 918, 1394, 1979, 2009
TasI AATT 5 cut(s) 501, 639, 1449, 1454, 1896
TatI WGTACW 2 cut(s) 404, 1914
TfiI GAWTC 6 cut(s) 44, 1199, 1313, 1364, 1885, 2332
TscAI CASTG 6 cut(s) 42, 451, 1183, 1803, 1960, 2037
TseFI GTSAC 5 cut(s) 23, 604, 1283, 1801, 2098
TseI GCWGC 5 cut(s) 134, 700, 997, 1193, 2048
Tsp45I GTSAC 5 cut(s) 23, 604, 1283, 1801, 2098
TspDTI ATGAA 8 cut(s) 396, 1247, 1305, 1350, 1521, 1715, 2106, 2186
TspGWI ACGGA 2 cut(s) 46, 1832
TspRI CASTG 6 cut(s) 42, 451, 1183, 1803, 1960, 2037
Van91I CCANNNNNTGG 1 cut(s) 2166
Vha464I CTTAAG 4 cut(s) 527, 554, 923, 2318
VneI GTGCAC 1 cut(s) 762
VpaK11BI GGWCC 7 cut(s) 85, 140, 254, 411, 1067, 1824, 2240
VspI ATTAAT 1 cut(s) 504
XapI RAATTY 2 cut(s) 1449, 1896
XceI RCATGY 1 cut(s) 1776
XcmI CCANNNNNNNNNTGG 1 cut(s) 1557
XhoI CTCGAG 1 cut(s) 2008
XmiI GTMKAC 2 cut(s) 918, 1011
XmnI GAANNNNTTC 1 cut(s) 1706
XspI CTAG 9 cut(s) 80, 224, 338, 734, 788, 855, 914, 1106, 1376
ZrmI AGTACT 1 cut(s) 406
Zsp2I ATGCAT 1 cut(s) 474
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.