AT3G22420

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
7946408 .. 7949177
2770 bp
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UTR
Exon/CDS
Intron
AT3G22420.4

Sequence Viewer

Length: 1707 bp
ATGAATGGTGAAGAAAGCTTTGTAGAAGATTGCTCTGTTTTTGTTGAGATTGATCCTTCTGGAAGATATGGAAGATACGATGAAATACTTGGCAAAGGAGCTTCAAAGACAGTATACAGAGCATTTGATGAGTATGAAGGTATAGAAGTAGCATGGAACCAAGTAAAGCTTCGAAATTTCACAAGGAATCCTGAGGAATTAGAGAAGTTTTTCAGAGAGATTCATCTTCTCAAGACTTTGAATCATCAAAACATTATGAAATTCTACACTTCTTGGGTTGATACCAACAATTTATCAATCAATTTTGTCACTGAACTCTTCACCTCTGGTACTCTCAGACAGTATAGGTTGAGACATAGAAGAGTGAATATTAGAGCAGTGAAGCAATGGTGCAAGCAGATTTTAAAAGGGCTTCTTTATTTACATAGTCGTTCTCCACCAATTATACATAGAGATCTCAAATGTGATAACATTTTCATCAATGGAAACCAAGGTGAAGTCAAGATCGGTGACCTTGGACTCGCTGCGATTCTTCGTAAATCACATGCCGTTCGTTGCGTTGGAACCCCTGAGTTTATGGCTCCAGAAGTGTATGATGAGGAATATAATGAGTTGGTTGATGTATATGCTTTTGGCATGTGTGTGTTGGAGATGGTTACTTTTGATTATCCTTACAGTGAATGTACTCACCCGGCACAAATCTACAAGAAAGTTACCTCGGGGAAAAAGCCTGAAGCTTTTTACTTAGTGAAGGATCCTGAGGTTCGTGAGTTTGTTGAGAAGTGTTTAGCTAACGTGACGTGTAGGCTAACGGCATTGGAGCTTTTACAAGACCCTTTTCTACAAGATGATAATATGGATGGATTTGTTATGAGACCTATTGATTACTACAATGGTTATGATGAAACTGGTGTGTTCCTTAGACATCCTTTGATTGATGATCCTCTTTACCATGATCAGTTTGAGTCGTCACAGATATGTGAGATCGATCTTTTCGCTAACGATGATGAAGATCATGTCGACATTTCGATTAAAGGGAAGAGAAACGGTGATGATGGGATATTCTTGAGACTTAGAATATCTGATGCTGAAGGACGGATAAGGAACATTTACTTCCCGTTTGAGACGGCTATTGATACTGCATGGAGTGTAGCGGTTGAGATGGTGTCAGAGCTCGACATAACGAATCAAGATGTTGCGAAAATCGCGGAGATGATCGATGCAGAGATTGCTGCATTGGTGCCTGATTGGAAAAATGATACAGAAAGTTCCCAAAATGTAAACAACAACAAGAACAACAACACTGCAGGATTCTGTGGAGAGTGTGCTTCAAACGGGTATATACAAGAGACTGTATCATCAGGAGAAAAATCTCATCATAATCATCATGAGTTCGATAGTTCTGAAGACAAGAGCTGTTCTTCGGTTCACGGTAGGTTTGCGGATATGTGGGGTTTGCGAGAATCATATTCTGATGATGGAGAAAAACAGAGCTCAAGGAAGGTTAGAAGTGGACGGTGGTCGGAGAATGAGATGAGACGAGAACTGAGATGGCTTAAGGCAAGGCACAAGATTCAACTTATGAAAATGAGAGGTCAAACGATCTGCGAGACACCGATAGAGATCTCTCTTACACCGGGAACTTCAGTTTCGTTACCTCTTCTTTACAGGGCTATATCACTTCCTGTGGATGCCGTGGATATGTGA

Protein Analysis

568

Amino Acids

65.33

Weight (kDa)

5.16

Isoelectric Point (pI)

45.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 98 - 352 4.9e-50 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 98 - 336 5e-34 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0020238)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22420 AT3G22420 AT3G22420 AT3G22420 AT3G22420 AT3G22420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1240
AccI GTMKAC 2 cut(s) 114, 1020
AccII CGCG 1 cut(s) 1208
AciI CCGC 3 cut(s) 1154, 1208, 1442
AclWI GGATC 4 cut(s) 47, 749, 762, 935
AcsI RAATTY 2 cut(s) 175, 260
AcuI CTGAAG 4 cut(s) 753, 1110, 1425, 1629
AfaI GTAC 2 cut(s) 331, 685
AflII CTTAAG 1 cut(s) 1556
AflIII ACRYGT 1 cut(s) 800
AgsI TTSAA 4 cut(s) 105, 241, 1332, 1577
AjiI CACGTC 1 cut(s) 801
AjuI GAANNNNNNNTTGG 2 cut(s) 153, 185
AluBI AGCT 9 cut(s) 18, 101, 169, 737, 791, 823, 1174, 1416, 1494
AluI AGCT 9 cut(s) 18, 101, 169, 737, 791, 823, 1174, 1416, 1494
Alw21I GWGCWC 2 cut(s) 1176, 1496
Alw26I GTCTC 7 cut(s) 346, 868, 1063, 1118, 1343, 1531, 1604
AlwI GGATC 4 cut(s) 47, 749, 762, 935
Ama87I CYCGRG 1 cut(s) 718
ApeKI GCWGC 2 cut(s) 524, 1232
ApoI RAATTY 2 cut(s) 175, 260
Asp700I GAANNNNTTC 1 cut(s) 209
AsuC2I CCSGG 2 cut(s) 692, 1638
AsuHPI GGTGA 6 cut(s) 20, 313, 506, 521, 680, 1061
AsuII TTCGAA 1 cut(s) 172
AvaI CYCGRG 1 cut(s) 718
AxyI CCTNAGG 2 cut(s) 192, 759
BamHI GGATCC 1 cut(s) 754
BanI GGYRCC 1 cut(s) 1240
BanII GRGCYC 2 cut(s) 1176, 1496
BbsI GAAGAC 1 cut(s) 1413
Bbv12I GWGCWC 2 cut(s) 1176, 1496
BbvI GCAGC 2 cut(s) 511, 1219
BccI CCATC 6 cut(s) 646, 854, 1049, 1156, 1472, 1545
BceAI ACGGC 4 cut(s) 533, 828, 1143, 1679
BclI TGATCA 1 cut(s) 955
BcnI CCSGG 2 cut(s) 692, 1638
BcoDI GTCTC 7 cut(s) 346, 868, 1063, 1118, 1343, 1531, 1604
BfmI CTRYAG 1 cut(s) 1305
BfrI CTTAAG 1 cut(s) 1556
BglII AGATCT 2 cut(s) 454, 1623
BisI GCNGC 2 cut(s) 525, 1233
BlsI GCNGC 2 cut(s) 526, 1234
Bme1390I CCNGG 2 cut(s) 692, 1638
BmeT110I CYCGRG 1 cut(s) 718
BmgBI CACGTC 1 cut(s) 801
BmiI GGNNCC 5 cut(s) 158, 565, 582, 756, 1242
BmrFI CCNGG 2 cut(s) 692, 1638
BmsI GCATC 3 cut(s) 1075, 1210, 1681
BoxI GACNNNNGTC 1 cut(s) 1519
BpiI GAAGAC 1 cut(s) 1413
BpmI CTGGAG 1 cut(s) 567
Bpu14I TTCGAA 1 cut(s) 172
BpuEI CTTGAG 3 cut(s) 215, 1087, 1480
BpuMI CCSGG 2 cut(s) 692, 1638
Bsa29I ATCGAT 2 cut(s) 987, 1218
BsaBI GATNNNNATC 2 cut(s) 1011, 1622
BsaI GGTCTC 1 cut(s) 868
BsaJI CCNNGG 4 cut(s) 490, 514, 717, 1695
Bse1I ACTGG 1 cut(s) 913
Bse21I CCTNAGG 2 cut(s) 192, 759
Bse3DI GCAATG 1 cut(s) 392
Bse8I GATNNNNATC 2 cut(s) 1011, 1622
BseCI ATCGAT 2 cut(s) 987, 1218
BseDI CCNNGG 4 cut(s) 490, 514, 717, 1695
BseGI GGATG 3 cut(s) 865, 925, 1696
BseJI GATNNNNATC 2 cut(s) 1011, 1622
BseMI GCAATG 1 cut(s) 392
BseMII CTCAG 5 cut(s) 183, 349, 561, 750, 1538
BseNI ACTGG 1 cut(s) 913
BseXI GCAGC 2 cut(s) 511, 1219
Bsh1236I CGCG 1 cut(s) 1208
BshNI GGYRCC 1 cut(s) 1240
BshVI ATCGAT 2 cut(s) 987, 1218
BsiHKAI GWGCWC 2 cut(s) 1176, 1496
BsiHKCI CYCGRG 1 cut(s) 718
BsiSI CCGG 2 cut(s) 692, 1637
BsmAI GTCTC 7 cut(s) 346, 868, 1063, 1118, 1343, 1531, 1604
BsmBI CGTCTC 2 cut(s) 1118, 1531
Bso31I GGTCTC 1 cut(s) 868
BsoBI CYCGRG 1 cut(s) 718
Bsp119I TTCGAA 1 cut(s) 172
Bsp1286I GDGCHC 2 cut(s) 1176, 1496
BspACI CCGC 3 cut(s) 1154, 1208, 1442
BspCNI CTCAG 5 cut(s) 184, 348, 562, 751, 1539
BspDI ATCGAT 2 cut(s) 987, 1218
BspFNI CGCG 1 cut(s) 1208
BspHI TCATGA 1 cut(s) 1387
BspLI GGNNCC 5 cut(s) 158, 565, 582, 756, 1242
BspMAI CTGCAG 1 cut(s) 1309
BspPI GGATC 4 cut(s) 47, 749, 762, 935
BspT104I TTCGAA 1 cut(s) 172
BspT107I GGYRCC 1 cut(s) 1240
BspTI CTTAAG 1 cut(s) 1556
BspTNI GGTCTC 1 cut(s) 868
BsrDI GCAATG 1 cut(s) 392
BsrI ACTGG 1 cut(s) 913
BssECI CCNNGG 4 cut(s) 490, 514, 717, 1695
BssNAI GTATAC 1 cut(s) 115
BssT1I CCWWGG 2 cut(s) 490, 514
Bst1107I GTATAC 1 cut(s) 115
Bst4CI ACNGT 7 cut(s) 112, 342, 677, 1049, 1354, 1433, 1518
Bst6I CTCTTC 4 cut(s) 323, 355, 1034, 1665
BstAFI CTTAAG 1 cut(s) 1556
BstAPI GCANNNNNTGC 1 cut(s) 1229
BstBI TTCGAA 1 cut(s) 172
BstC8I GCNNGC 1 cut(s) 395
BstDEI CTNAG 8 cut(s) 192, 335, 570, 745, 759, 920, 1073, 1547
BstDSI CCRYGG 1 cut(s) 1695
BstEII GGTNACC 1 cut(s) 509
BstF5I GGATG 3 cut(s) 865, 925, 1696
BstFNI CGCG 1 cut(s) 1208
BstMAI GTCTC 7 cut(s) 346, 868, 1063, 1118, 1343, 1531, 1604
BstMWI GCNNNNNNNGC 2 cut(s) 1205, 1229
BstNSI RCATGY 2 cut(s) 548, 640
BstPAI GACNNNNGTC 1 cut(s) 1519
BstPI GGTNACC 1 cut(s) 509
BstSCI CCNGG 2 cut(s) 690, 1636
BstSFI CTRYAG 1 cut(s) 1305
BstUI CGCG 1 cut(s) 1208
BstV1I GCAGC 2 cut(s) 511, 1219
BstV2I GAAGAC 1 cut(s) 1413
BstX2I RGATCY 3 cut(s) 454, 754, 1623
BstYI RGATCY 3 cut(s) 454, 754, 1623
BstZ17I GTATAC 1 cut(s) 115
Bsu15I ATCGAT 2 cut(s) 987, 1218
Bsu36I CCTNAGG 2 cut(s) 192, 759
BsuTUI ATCGAT 2 cut(s) 987, 1218
BtgI CCRYGG 1 cut(s) 1695
BtrI CACGTC 1 cut(s) 801
BtsCI GGATG 3 cut(s) 865, 925, 1696
BtsI GCAGTG 2 cut(s) 384, 1302
BtsIMutI CAGTG 4 cut(s) 309, 384, 682, 1302
Cac8I GCNNGC 1 cut(s) 395
CciI TCATGA 1 cut(s) 1387
ClaI ATCGAT 2 cut(s) 987, 1218
Csp6I GTAC 2 cut(s) 330, 684
CviAII CATG 7 cut(s) 153, 545, 637, 953, 1016, 1143, 1388
CviQI GTAC 2 cut(s) 330, 684
DdeI CTNAG 8 cut(s) 192, 335, 570, 745, 759, 920, 1073, 1547
DraI TTTAAA 1 cut(s) 405
Eam1104I CTCTTC 4 cut(s) 323, 355, 1034, 1665
EarI CTCTTC 4 cut(s) 323, 355, 1034, 1665
Ecl136II GAGCTC 2 cut(s) 1174, 1494
Eco130I CCWWGG 2 cut(s) 490, 514
Eco24I GRGCYC 2 cut(s) 1176, 1496
Eco31I GGTCTC 1 cut(s) 868
Eco53kI GAGCTC 2 cut(s) 1174, 1494
Eco57I CTGAAG 4 cut(s) 753, 1110, 1425, 1629
Eco81I CCTNAGG 2 cut(s) 192, 759
Eco88I CYCGRG 1 cut(s) 718
Eco91I GGTNACC 1 cut(s) 509
EcoICRI GAGCTC 2 cut(s) 1174, 1494
EcoO65I GGTNACC 1 cut(s) 509
EcoT14I CCWWGG 2 cut(s) 490, 514
EcoT38I GRGCYC 2 cut(s) 1176, 1496
ErhI CCWWGG 2 cut(s) 490, 514
Esp3I CGTCTC 2 cut(s) 1118, 1531
FaeI CATG 7 cut(s) 156, 548, 640, 956, 1019, 1146, 1391
FalI AAGNNNNNCTT 4 cut(s) 153, 185, 399, 431
FatI CATG 7 cut(s) 152, 544, 636, 952, 1015, 1142, 1387
FbaI TGATCA 1 cut(s) 955
FblI GTMKAC 2 cut(s) 114, 1020
Fnu4HI GCNGC 2 cut(s) 525, 1233
FokI GGATG 3 cut(s) 872, 912, 1703
FriOI GRGCYC 2 cut(s) 1176, 1496
Fsp4HI GCNGC 2 cut(s) 525, 1233
GluI GCNGC 2 cut(s) 525, 1233
GsuI CTGGAG 1 cut(s) 567
HapII CCGG 2 cut(s) 692, 1637
Hin1II CATG 7 cut(s) 156, 548, 640, 956, 1019, 1146, 1391
HincII GTYRAC 1 cut(s) 1021
HindII GTYRAC 1 cut(s) 1021
HindIII AAGCTT 3 cut(s) 16, 167, 735
HpaII CCGG 2 cut(s) 692, 1637
HphI GGTGA 6 cut(s) 20, 313, 506, 521, 680, 1061
Hpy166II GTNNAC 5 cut(s) 115, 1021, 1282, 1429, 1514
Hpy188I TCNGA 7 cut(s) 215, 338, 1084, 1171, 1405, 1474, 1525
Hpy8I GTNNAC 5 cut(s) 115, 1021, 1282, 1429, 1514
HpyAV CCTTC 5 cut(s) 66, 131, 745, 1085, 1495
HpyCH4III ACNGT 7 cut(s) 112, 342, 677, 1049, 1354, 1433, 1518
HpyCH4IV ACGT 2 cut(s) 795, 800
HpyCH4V TGCA 5 cut(s) 393, 1142, 1223, 1235, 1307
HpyF10VI GCNNNNNNNGC 2 cut(s) 1205, 1229
HpyF3I CTNAG 8 cut(s) 192, 335, 570, 745, 759, 920, 1073, 1547
HpySE526I ACGT 2 cut(s) 795, 800
Hsp92II CATG 7 cut(s) 156, 548, 640, 956, 1019, 1146, 1391
Ksp22I TGATCA 1 cut(s) 955
LmnI GCTCC 3 cut(s) 98, 586, 820
Lsp1109I GCAGC 2 cut(s) 511, 1219
LweI GCATC 3 cut(s) 1075, 1210, 1681
MaeII ACGT 2 cut(s) 795, 800
MaeIII GTNAC 7 cut(s) 307, 509, 655, 712, 796, 969, 1653
MflI RGATCY 3 cut(s) 454, 754, 1623
MhlI GDGCHC 2 cut(s) 1176, 1496
MluCI AATT 6 cut(s) 175, 197, 260, 289, 301, 441
MlyI GAGTC 2 cut(s) 513, 974
MmeI TCCRAC 3 cut(s) 541, 627, 1503
MnlI CCTC 8 cut(s) 187, 334, 592, 727, 754, 954, 1586, 1668
MroXI GAANNNNTTC 1 cut(s) 209
MseI TTAA 3 cut(s) 404, 1032, 1557
MslI CAYNNNNRTG 2 cut(s) 641, 976
MspCI CTTAAG 1 cut(s) 1556
MspI CCGG 2 cut(s) 692, 1637
MspR9I CCNGG 2 cut(s) 692, 1638
MvnI CGCG 1 cut(s) 1208
MwoI GCNNNNNNNGC 2 cut(s) 1205, 1229
NciI CCSGG 2 cut(s) 692, 1638
NlaIII CATG 7 cut(s) 156, 548, 640, 956, 1019, 1146, 1391
NlaIV GGNNCC 5 cut(s) 158, 565, 582, 756, 1242
NmuCI GTSAC 4 cut(s) 307, 509, 796, 969
NspI RCATGY 2 cut(s) 548, 640
NspV TTCGAA 1 cut(s) 172
PagI TCATGA 1 cut(s) 1387
PdmI GAANNNNTTC 1 cut(s) 209
PfeI GAWTC 8 cut(s) 187, 220, 241, 529, 1186, 1311, 1463, 1573
PkrI GCNGC 2 cut(s) 526, 1234
PleI GAGTC 2 cut(s) 513, 973
PpsI GAGTC 2 cut(s) 513, 973
PshAI GACNNNNGTC 1 cut(s) 1519
Psp124BI GAGCTC 2 cut(s) 1176, 1496
PspEI GGTNACC 1 cut(s) 509
PspN4I GGNNCC 5 cut(s) 158, 565, 582, 756, 1242
PstI CTGCAG 1 cut(s) 1309
PsuI RGATCY 3 cut(s) 454, 754, 1623
RsaI GTAC 2 cut(s) 331, 685
RsaNI GTAC 2 cut(s) 330, 684
RseI CAYNNNNRTG 2 cut(s) 641, 976
SacI GAGCTC 2 cut(s) 1176, 1496
SalI GTCGAC 1 cut(s) 1019
SaqAI TTAA 3 cut(s) 404, 1032, 1557
SatI GCNGC 2 cut(s) 525, 1233
SchI GAGTC 2 cut(s) 513, 974
ScrFI CCNGG 2 cut(s) 692, 1638
SduI GDGCHC 2 cut(s) 1176, 1496
SfaNI GCATC 3 cut(s) 1075, 1210, 1681
SfcI CTRYAG 1 cut(s) 1305
SfuI TTCGAA 1 cut(s) 172
SmiMI CAYNNNNRTG 2 cut(s) 641, 976
SmlI CTYRAG 4 cut(s) 230, 1066, 1495, 1556
SmoI CTYRAG 4 cut(s) 230, 1066, 1495, 1556
Sse9I AATT 6 cut(s) 175, 197, 260, 289, 301, 441
SsiI CCGC 3 cut(s) 1154, 1208, 1442
SspI AATATT 1 cut(s) 370
SstI GAGCTC 2 cut(s) 1176, 1496
StyD4I CCNGG 2 cut(s) 690, 1636
StyI CCWWGG 2 cut(s) 490, 514
TaaI ACNGT 7 cut(s) 112, 342, 677, 1049, 1354, 1433, 1518
TaiI ACGT 2 cut(s) 798, 803
TaqI TCGA 7 cut(s) 172, 987, 1020, 1028, 1176, 1218, 1395
TasI AATT 6 cut(s) 175, 197, 260, 289, 301, 441
TatI WGTACW 1 cut(s) 683
TfiI GAWTC 8 cut(s) 187, 220, 241, 529, 1186, 1311, 1463, 1573
Tru1I TTAA 3 cut(s) 404, 1032, 1557
Tru9I TTAA 3 cut(s) 404, 1032, 1557
TscAI CASTG 4 cut(s) 316, 384, 682, 1309
TseFI GTSAC 4 cut(s) 307, 509, 796, 969
TseI GCWGC 2 cut(s) 524, 1232
Tsp45I GTSAC 4 cut(s) 307, 509, 796, 969
TspDTI ATGAA 9 cut(s) 17, 96, 150, 212, 272, 466, 918, 1023, 1598
TspGWI ACGGA 1 cut(s) 1111
TspRI CASTG 4 cut(s) 316, 384, 682, 1309
Vha464I CTTAAG 1 cut(s) 1556
XapI RAATTY 2 cut(s) 175, 260
XceI RCATGY 2 cut(s) 548, 640
XmiI GTMKAC 2 cut(s) 114, 1020
XmnI GAANNNNTTC 1 cut(s) 209
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.