AT3G46930

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0020243
Physical Location & Seq
Forward (+)
17285565 .. 17288077
2513 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G46930.5

Sequence Viewer

Length: 1443 bp
ATGTGTAGAGTTGGTGGTGTAATTCAGAAAACTTTCCGGAGATTTTTTGGTGATGTGTTGTTCGTAGGAATTTGTCAGAGTACGCAGCAGCTGACTGGTTTGAGTTGTGGTAGTGTTGTTGGTACTGAAGTGCAGAGGAATCCAGTTACTAATAAGAAGAGATCTGTTTCTCCGTTGCCTCATATGGCTCTTTCTGATGCTTTTATCGAAGCAAAGTCTGATATTAAGAGGTTTTCTACTCCACATCCTAGAAGAGTGGAACCAGAGAAGGGAATGAAGGCCAAGTCGTCGTCCCGCAAAGATTCTTCTGAGAAAAAATCAGTTAATCTACGGTCCCTGTCTCACTCGGGTCCTATTAGGGATCTTAGTACGCAGAAAGTTAAAGAGAGGGGAAAGAGCAAGATAGATAAGAAGTCTTCAAAGTCTGTTGACTATAGAGGTTCTAAAGTAAGTTCTGCAGGAGTGCTTGAAGAATGCCTCATTGATGTGTCTAAGTTGTCTTATGGGGATAGGTTTGCTCACGGGAAATATAGCCAGATTTATCATGGTGAATATGAAGGCAAAGCTGTTGCTCTGAAGATTATCACAGCGCCTGAGGATAGTGACGACATATTCTTGGGAGCTCGTTTAGAAAAAGAGTTTATCGTGGAAGCCACTCTTTTATCTCGACTAAGCCATCCAAATGTCGTTAAGTTTGTTGGAGTGAATACTGGAAACTGTATCATCACAGAGTATGTACCTCGAGGGTCTTTAAGATCATATCTGCACAAGCTCGAGCAGAAATCCCTTCCTTTGGAACAGCTAATCGATTTTGGTCTGGATATTGCTAAAGGAATGGAATATATTCACTCAAGAGAGATAGTTCATCAGGATCTGAAGCCAGAAAACGTGTTGATCGACAATGACTTTCACTTGAAGATTGCTGACTTTGGCATAGCGTGCGAGGAGGAGTACTGTGATGTTTTGGGGGATAACATAGGAACTTATAGGTGGATGGCACCTGAAGTTTTAAAACGGATACCACATGGACGGAAGTGCGATGTTTATAGTTTTGGACTTCTTTTATGGGAAATGGTAGCTGGAGCACTTCCATATGAGGAGATGAAATTTGCTGAACAAATTGCCTACGCAGTTATATACAAGAAAATTAGGCCAGTTATACCGACGGATTGTCCAGCGGCCATGAAAGAGCTGATCGAGCGATGTTGGTCATCGCAAACAGACAAGAGACCGGAATTCTGGCAGATTGTCAAAGTGTTGGAACATTTCAAGAAGTCTCTAACAAGCGAAGGAAAACTTAATCTTTTACCTAGCCAGATCTGTCCAGAACTAAAGAAATGTCCTAAATTCTGGATTCATATATTCGGATCATTCCACCACCACAGCAGCGGTGGCGGCAGCAGCAGCAACAACTCAGCCTTACCTAAGCCTAAATTCGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

480

Amino Acids

53.95

Weight (kDa)

9.08

Isoelectric Point (pI)

43.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 169 - 376 2.2e-48 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 174 - 370 4.9e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0020243)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G46930 AT3G46930 AT3G46930 AT3G46930 AT3G46930 AT3G46930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 741
AccB1I GGYRCC 1 cut(s) 997
AccIII TCCGGA 1 cut(s) 36
AciI CCGC 4 cut(s) 295, 1178, 1389, 1395
AclWI GGATC 3 cut(s) 369, 879, 1375
AcoI YGGCCR 1 cut(s) 1179
AcsI RAATTY 5 cut(s) 69, 1106, 1235, 1346, 1433
AcuI CTGAAG 4 cut(s) 147, 596, 896, 1023
AfaI GTAC 5 cut(s) 82, 124, 370, 738, 953
AfiI CCNNNNNNNGG 2 cut(s) 269, 793
AflIII ACRYGT 1 cut(s) 888
AgsI TTSAA 4 cut(s) 420, 470, 916, 1270
AhdI GACNNNNNGTC 1 cut(s) 1170
AluBI AGCT 7 cut(s) 91, 566, 623, 772, 802, 1079, 1192
AluI AGCT 7 cut(s) 91, 566, 623, 772, 802, 1079, 1192
Alw21I GWGCWC 2 cut(s) 625, 1087
Alw26I GTCTC 3 cut(s) 345, 1222, 1281
AlwI GGATC 3 cut(s) 369, 879, 1375
AlwNI CAGNNNCTG 3 cut(s) 91, 593, 874
Ama87I CYCGRG 3 cut(s) 346, 741, 773
Aor13HI TCCGGA 1 cut(s) 36
AoxI GGCC 3 cut(s) 279, 1151, 1179
ApeKI GCWGC 6 cut(s) 85, 88, 1386, 1398, 1401, 1404
ApoI RAATTY 5 cut(s) 69, 1106, 1235, 1346, 1433
Asp700I GAANNNNTTC 2 cut(s) 32, 843
AspLEI GCGC 1 cut(s) 592
AspS9I GGNCC 2 cut(s) 333, 350
AsuHPI GGTGA 2 cut(s) 62, 560
AvaI CYCGRG 3 cut(s) 346, 741, 773
AvaII GGWCC 2 cut(s) 333, 350
AxyI CCTNAGG 1 cut(s) 594
BaeI ACNNNNGTAYC 2 cut(s) 114, 147
BanI GGYRCC 1 cut(s) 997
BanII GRGCYC 1 cut(s) 625
BbsI GAAGAC 1 cut(s) 408
Bbv12I GWGCWC 2 cut(s) 625, 1087
BbvI GCAGC 6 cut(s) 97, 100, 1398, 1410, 1413, 1416
BccI CCATC 2 cut(s) 684, 988
BciVI GTATCC 1 cut(s) 1011
BcoDI GTCTC 3 cut(s) 345, 1222, 1281
BfaI CTAG 2 cut(s) 249, 1311
BfmI CTRYAG 2 cut(s) 433, 456
BfoI RGCGCY 1 cut(s) 593
BfuI GTATCC 1 cut(s) 1011
BglII AGATCT 2 cut(s) 161, 1317
BisI GCNGC 8 cut(s) 86, 89, 1179, 1387, 1396, 1399, 1402, 1405
BlsI GCNGC 8 cut(s) 87, 90, 1180, 1388, 1397, 1400, 1403, 1406
BmcAI AGTACT 1 cut(s) 953
Bme18I GGWCC 2 cut(s) 333, 350
BmeRI GACNNNNNGTC 1 cut(s) 1170
BmeT110I CYCGRG 3 cut(s) 346, 741, 773
BmgT120I GGNCC 2 cut(s) 333, 350
BmiI GGNNCC 4 cut(s) 261, 335, 351, 999
BmsI GCATC 1 cut(s) 187
BpiI GAAGAC 1 cut(s) 408
BpmI CTGGAG 1 cut(s) 1101
Bpu10I CCTNAGC 1 cut(s) 1425
BpuEI CTTGAG 1 cut(s) 835
Bsa29I ATCGAT 1 cut(s) 807
BsaI GGTCTC 1 cut(s) 1222
BsaWI WCCGGW 2 cut(s) 36, 1231
Bsc4I CCNNNNNNNGG 2 cut(s) 269, 793
Bse1I ACTGG 4 cut(s) 100, 143, 715, 1154
Bse21I CCTNAGG 1 cut(s) 594
BseAI TCCGGA 1 cut(s) 36
BseCI ATCGAT 1 cut(s) 807
BseGI GGATG 3 cut(s) 244, 676, 999
BseLI CCNNNNNNNGG 2 cut(s) 269, 793
BseMII CTCAG 3 cut(s) 300, 585, 1428
BseNI ACTGG 4 cut(s) 100, 143, 715, 1154
BseRI GAGGAG 3 cut(s) 959, 962, 1112
BseXI GCAGC 6 cut(s) 97, 100, 1398, 1410, 1413, 1416
BsgI GTGCAG 2 cut(s) 152, 749
BshFI GGCC 3 cut(s) 281, 1153, 1181
BshNI GGYRCC 1 cut(s) 997
BshVI ATCGAT 1 cut(s) 807
BsiHKAI GWGCWC 2 cut(s) 625, 1087
BsiHKCI CYCGRG 3 cut(s) 346, 741, 773
BsiSI CCGG 2 cut(s) 37, 1232
BslFI GGGAC 2 cut(s) 277, 319
BslI CCNNNNNNNGG 2 cut(s) 269, 793
BsmAI GTCTC 3 cut(s) 345, 1222, 1281
BsmFI GGGAC 2 cut(s) 277, 319
BsmI GAATGC 1 cut(s) 479
BsnI GGCC 3 cut(s) 281, 1153, 1181
Bso31I GGTCTC 1 cut(s) 1222
BsoBI CYCGRG 3 cut(s) 346, 741, 773
Bsp1286I GDGCHC 2 cut(s) 625, 1087
Bsp13I TCCGGA 1 cut(s) 36
Bsp143I GATC 8 cut(s) 161, 361, 755, 871, 894, 1194, 1317, 1367
BspACI CCGC 4 cut(s) 295, 1178, 1389, 1395
BspANI GGCC 3 cut(s) 281, 1153, 1181
BspCNI CTCAG 3 cut(s) 301, 586, 1427
BspDI ATCGAT 1 cut(s) 807
BspEI TCCGGA 1 cut(s) 36
BspLI GGNNCC 4 cut(s) 261, 335, 351, 999
BspMAI CTGCAG 1 cut(s) 460
BspPI GGATC 3 cut(s) 369, 879, 1375
BspT107I GGYRCC 1 cut(s) 997
BspTNI GGTCTC 1 cut(s) 1222
BsrI ACTGG 4 cut(s) 100, 143, 715, 1154
BssMI GATC 8 cut(s) 161, 361, 755, 871, 894, 1194, 1317, 1367
Bst4CI ACNGT 3 cut(s) 333, 719, 956
Bst6I CTCTTC 2 cut(s) 152, 247
BstAPI GCANNNNNTGC 1 cut(s) 939
BstC8I GCNNGC 1 cut(s) 940
BstDEI CTNAG 7 cut(s) 309, 365, 492, 594, 671, 1414, 1425
BstF5I GGATG 3 cut(s) 244, 676, 999
BstH2I RGCGCY 1 cut(s) 593
BstHHI GCGC 1 cut(s) 592
BstKTI GATC 8 cut(s) 164, 364, 758, 874, 897, 1197, 1320, 1370
BstMAI GTCTC 3 cut(s) 345, 1222, 1281
BstMBI GATC 8 cut(s) 161, 361, 755, 871, 894, 1194, 1317, 1367
BstMWI GCNNNNNNNGC 6 cut(s) 939, 1198, 1392, 1395, 1401, 1404
BstSFI CTRYAG 2 cut(s) 433, 456
BstV1I GCAGC 6 cut(s) 97, 100, 1398, 1410, 1413, 1416
BstV2I GAAGAC 1 cut(s) 408
BstX2I RGATCY 4 cut(s) 161, 361, 871, 1317
BstYI RGATCY 4 cut(s) 161, 361, 871, 1317
Bsu15I ATCGAT 1 cut(s) 807
Bsu36I CCTNAGG 1 cut(s) 594
BsuI GTATCC 1 cut(s) 1011
BsuRI GGCC 3 cut(s) 281, 1153, 1181
BsuTUI ATCGAT 1 cut(s) 807
BtgZI GCGATG 3 cut(s) 1053, 1197, 1216
BtsCI GGATG 3 cut(s) 244, 676, 999
Cac8I GCNNGC 1 cut(s) 940
CaiI CAGNNNCTG 3 cut(s) 91, 593, 874
CfoI GCGC 1 cut(s) 592
Cfr13I GGNCC 2 cut(s) 333, 350
ClaI ATCGAT 1 cut(s) 807
Csp6I GTAC 5 cut(s) 81, 123, 369, 737, 952
CviAII CATG 3 cut(s) 545, 1025, 1183
CviQI GTAC 5 cut(s) 81, 123, 369, 737, 952
DdeI CTNAG 7 cut(s) 309, 365, 492, 594, 671, 1414, 1425
DpnI GATC 8 cut(s) 163, 363, 757, 873, 896, 1196, 1319, 1369
DpnII GATC 8 cut(s) 161, 361, 755, 871, 894, 1194, 1317, 1367
DraI TTTAAA 1 cut(s) 1011
DriI GACNNNNNGTC 1 cut(s) 1170
EaeI YGGCCR 1 cut(s) 1179
Eam1104I CTCTTC 2 cut(s) 152, 247
Eam1105I GACNNNNNGTC 1 cut(s) 1170
EarI CTCTTC 2 cut(s) 152, 247
Ecl136II GAGCTC 1 cut(s) 623
Eco24I GRGCYC 1 cut(s) 625
Eco31I GGTCTC 1 cut(s) 1222
Eco47I GGWCC 2 cut(s) 333, 350
Eco53kI GAGCTC 1 cut(s) 623
Eco57I CTGAAG 4 cut(s) 147, 596, 896, 1023
Eco81I CCTNAGG 1 cut(s) 594
Eco88I CYCGRG 3 cut(s) 346, 741, 773
EcoICRI GAGCTC 1 cut(s) 623
EcoO109I RGGNCCY 1 cut(s) 350
EcoRI GAATTC 1 cut(s) 1235
EcoT38I GRGCYC 1 cut(s) 625
FaeI CATG 3 cut(s) 548, 1028, 1186
FalI AAGNNNNNCTT 4 cut(s) 642, 674, 1281, 1313
FaqI GGGAC 2 cut(s) 277, 319
FatI CATG 3 cut(s) 544, 1024, 1182
FauI CCCGC 1 cut(s) 302
FauNDI CATATG 2 cut(s) 183, 1093
Fnu4HI GCNGC 8 cut(s) 86, 89, 1179, 1387, 1396, 1399, 1402, 1405
FokI GGATG 3 cut(s) 231, 663, 1006
FriOI GRGCYC 1 cut(s) 625
Fsp4HI GCNGC 8 cut(s) 86, 89, 1179, 1387, 1396, 1399, 1402, 1405
FspBI CTAG 2 cut(s) 249, 1311
GlaI GCGC 1 cut(s) 591
GluI GCNGC 8 cut(s) 86, 89, 1179, 1387, 1396, 1399, 1402, 1405
GsuI CTGGAG 1 cut(s) 1101
HaeII RGCGCY 1 cut(s) 593
HaeIII GGCC 3 cut(s) 281, 1153, 1181
HapII CCGG 2 cut(s) 37, 1232
HhaI GCGC 1 cut(s) 592
Hin1II CATG 3 cut(s) 548, 1028, 1186
Hin6I GCGC 1 cut(s) 590
HinP1I GCGC 1 cut(s) 590
HincII GTYRAC 1 cut(s) 430
HindII GTYRAC 1 cut(s) 430
HinfI GANTC 3 cut(s) 139, 302, 1354
HpaII CCGG 2 cut(s) 37, 1232
HphI GGTGA 2 cut(s) 62, 560
Hpy166II GTNNAC 1 cut(s) 430
Hpy188I TCNGA 8 cut(s) 27, 78, 196, 220, 310, 576, 876, 1367
Hpy188III TCNNGA 8 cut(s) 37, 666, 818, 852, 869, 1270, 1325, 1351
Hpy8I GTNNAC 1 cut(s) 430
Hpy99I CGWCG 2 cut(s) 292, 1168
HpyAV CCTTC 5 cut(s) 262, 271, 551, 797, 1283
HpyCH4III ACNGT 3 cut(s) 333, 719, 956
HpyCH4IV ACGT 1 cut(s) 888
HpyCH4V TGCA 3 cut(s) 133, 458, 766
HpyF10VI GCNNNNNNNGC 6 cut(s) 939, 1198, 1392, 1395, 1401, 1404
HpyF3I CTNAG 7 cut(s) 309, 365, 492, 594, 671, 1414, 1425
HpySE526I ACGT 1 cut(s) 888
Hsp92II CATG 3 cut(s) 548, 1028, 1186
HspAI GCGC 1 cut(s) 590
Kpn2I TCCGGA 1 cut(s) 36
Kzo9I GATC 8 cut(s) 161, 361, 755, 871, 894, 1194, 1317, 1367
LmnI GCTCC 2 cut(s) 620, 1082
Lsp1109I GCAGC 6 cut(s) 97, 100, 1398, 1410, 1413, 1416
LweI GCATC 1 cut(s) 187
MaeI CTAG 2 cut(s) 249, 1311
MaeII ACGT 1 cut(s) 888
MaeIII GTNAC 2 cut(s) 145, 602
MalI GATC 8 cut(s) 163, 363, 757, 873, 896, 1196, 1319, 1369
MboI GATC 8 cut(s) 161, 361, 755, 871, 894, 1194, 1317, 1367
MboII GAAGA 7 cut(s) 169, 264, 297, 408, 482, 589, 928
MflI RGATCY 4 cut(s) 161, 361, 871, 1317
MhlI GDGCHC 2 cut(s) 625, 1087
MluCI AATT 8 cut(s) 21, 69, 1106, 1119, 1146, 1235, 1346, 1433
MmeI TCCRAC 2 cut(s) 679, 1239
MroI TCCGGA 1 cut(s) 36
MroXI GAANNNNTTC 2 cut(s) 32, 843
MseI TTAA 7 cut(s) 225, 324, 381, 690, 752, 1010, 1299
MslI CAYNNNNRTG 2 cut(s) 485, 681
MspA1I CMGCKG 3 cut(s) 91, 1178, 1389
MspI CCGG 2 cut(s) 37, 1232
Mva1269I GAATGC 1 cut(s) 479
MwoI GCNNNNNNNGC 6 cut(s) 939, 1198, 1392, 1395, 1401, 1404
NdeI CATATG 2 cut(s) 183, 1093
NdeII GATC 8 cut(s) 161, 361, 755, 871, 894, 1194, 1317, 1367
NlaIII CATG 3 cut(s) 548, 1028, 1186
NlaIV GGNNCC 4 cut(s) 261, 335, 351, 999
NmuCI GTSAC 1 cut(s) 602
PaeR7I CTCGAG 2 cut(s) 741, 773
PcsI WCGNNNNNNNCGW 1 cut(s) 894
PctI GAATGC 1 cut(s) 479
PdmI GAANNNNTTC 2 cut(s) 32, 843
PfeI GAWTC 3 cut(s) 139, 302, 1354
PkrI GCNGC 8 cut(s) 87, 90, 1180, 1388, 1397, 1400, 1403, 1406
PpuMI RGGWCCY 1 cut(s) 350
Psp124BI GAGCTC 1 cut(s) 625
Psp5II RGGWCCY 1 cut(s) 350
PspN4I GGNNCC 4 cut(s) 261, 335, 351, 999
PspPI GGNCC 2 cut(s) 333, 350
PspPPI RGGWCCY 1 cut(s) 350
PspXI VCTCGAGB 2 cut(s) 741, 773
PstI CTGCAG 1 cut(s) 460
PstNI CAGNNNCTG 3 cut(s) 91, 593, 874
PsuI RGATCY 4 cut(s) 161, 361, 871, 1317
PvuII CAGCTG 1 cut(s) 91
RsaI GTAC 5 cut(s) 82, 124, 370, 738, 953
RsaNI GTAC 5 cut(s) 81, 123, 369, 737, 952
RseI CAYNNNNRTG 2 cut(s) 485, 681
SacI GAGCTC 1 cut(s) 625
SaqAI TTAA 7 cut(s) 225, 324, 381, 690, 752, 1010, 1299
SatI GCNGC 8 cut(s) 86, 89, 1179, 1387, 1396, 1399, 1402, 1405
Sau3AI GATC 8 cut(s) 161, 361, 755, 871, 894, 1194, 1317, 1367
Sau96I GGNCC 2 cut(s) 333, 350
ScaI AGTACT 1 cut(s) 953
SduI GDGCHC 2 cut(s) 625, 1087
SfaNI GCATC 1 cut(s) 187
SfcI CTRYAG 2 cut(s) 433, 456
Sfr274I CTCGAG 2 cut(s) 741, 773
SinI GGWCC 2 cut(s) 333, 350
SlaI CTCGAG 2 cut(s) 741, 773
SmiMI CAYNNNNRTG 2 cut(s) 485, 681
SmlI CTYRAG 3 cut(s) 741, 773, 850
SmoI CTYRAG 3 cut(s) 741, 773, 850
Sse9I AATT 8 cut(s) 21, 69, 1106, 1119, 1146, 1235, 1346, 1433
SsiI CCGC 4 cut(s) 295, 1178, 1389, 1395
SspMI CTAG 2 cut(s) 249, 1311
SstI GAGCTC 1 cut(s) 625
TaaI ACNGT 3 cut(s) 333, 719, 956
TaiI ACGT 1 cut(s) 891
TaqI TCGA 7 cut(s) 207, 667, 742, 774, 807, 897, 1197
TasI AATT 8 cut(s) 21, 69, 1106, 1119, 1146, 1235, 1346, 1433
TatI WGTACW 1 cut(s) 951
TauI GCSGC 2 cut(s) 1181, 1398
TfiI GAWTC 3 cut(s) 139, 302, 1354
Tru1I TTAA 7 cut(s) 225, 324, 381, 690, 752, 1010, 1299
Tru9I TTAA 7 cut(s) 225, 324, 381, 690, 752, 1010, 1299
TseFI GTSAC 1 cut(s) 602
TseI GCWGC 6 cut(s) 85, 88, 1386, 1398, 1401, 1404
Tsp45I GTSAC 1 cut(s) 602
TspDTI ATGAA 6 cut(s) 290, 570, 854, 1118, 1199, 1346
TspGWI ACGGA 4 cut(s) 162, 1030, 1045, 1181
VpaK11BI GGWCC 2 cut(s) 333, 350
XapI RAATTY 5 cut(s) 69, 1106, 1235, 1346, 1433
XcmI CCANNNNNNNNNTGG 2 cut(s) 542, 1388
XhoI CTCGAG 2 cut(s) 741, 773
XmnI GAANNNNTTC 2 cut(s) 32, 843
XspI CTAG 2 cut(s) 249, 1311
ZrmI AGTACT 1 cut(s) 953
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.