Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0026930

Physical Location & Seq

Genomic Coordinates Forward (+)

21392501 .. 21393972

Gene Structure 1472 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G57740.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1074 bp

ATGAGTTGTTGGAGGAAGAAGTCGAAGAAGAAGAACTCAGAAGCAAATCAACGGCAAAGATGGTTCCAAGAGAACGGGAAGGTACTCTTAGAAGATCTCATCGAGCTTTGCAATGGCAAATCCAATCCAATCAAAACCTTCTCTGCTGAAGAAATCCTCCAAGCCACCGATAACTTCAGCGAGAGCAATCTCGTGATTCGGTTCAACTTTATGTACAGAGGTATACTCCAAAACCGTCCTGTTTTGATCAAAAGAGCCACATGGAACTACTACAAATCTGATACATTAGAAAAGATCTGTCGTGACATAGCGGTCTCATCAATGGTTAGTGGTCACAAGAATTTCCTCAAATTGTTAGGATGTTGTCTTGAGTTTGAGCATCCGGTCTTAGTTTGCGAGTATGCAGAACGTATACCATTCAATACTCCAAACCCGGAAATGTTGTTACCGTGGAGAATGCGAATAAAGATTGCCAAAGAGATTGCGATTGCGGTTTCTTACCTTCACACCGCGTTGTCAAGAACTATGATTCATACGGATATACAACCTTTTAACATTTTCGTGGATTCCAATGGGACAGCAAAGCTAAGTGACTTTTGTCTTTGTATCGCAATTCCAGAAGGAGAGACATTTGTTAAGGTTCATGCTGATAGAGTAGAAGGAACATTAGATTATCTAGAGTATAACTACGCGGCGACCGGATTGATCACCGAGTATACCGATGTTTTTAGCTTTGGAGTGTTGTTGCAAAACTTTTTCACAAGAACGTACGGAGTGGTTGATTGTTGTTGCAGTGAAGATGAGAGTCTATTTGAAGAGTTTGAAGACAAACAAAATGTAATGAATCTAAGGATTTCAGATAGGATATCCAAATTTGTGGAAGAGGGAAGAATCTTTGACATGTTGGATCCAAAAATGTTGGAAAGTATGGGTGATGATGAAACCGAAGAACACAAGATACGACGAATGAAAGCAGTCCTTATGCTCTCACTCAGATGTACTGGTCATAGAGGTGATGTTCCAAAGATGATGGAAGTTGCCAAGGAACTAAAAAGGATTGAGAGATGGACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

357

Amino Acids

41.5

Weight (kDa)

6.07

Isoelectric Point (pI)

42.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	77 - 257	4.4e-20	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	77 - 256	1.6e-19	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0026930)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57740 AT3G57740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	311
AccI	GTMKAC	3 cut(s)	223, 412, 716
AccII	CGCG	2 cut(s)	512, 692
AciI	CCGC	4 cut(s)	311, 491, 510, 692
AclWI	GGATC	2 cut(s)	902, 915
AcsI	RAATTY	2 cut(s)	340, 872
AcuI	CTGAAG	2 cut(s)	160, 168
AfaI	GTAC	4 cut(s)	84, 215, 770, 1000
AflIII	ACRYGT	1 cut(s)	900
AgsI	TTSAA	4 cut(s)	205, 421, 815, 824
AluBI	AGCT	3 cut(s)	106, 586, 732
AluI	AGCT	3 cut(s)	106, 586, 732
Alw26I	GTCTC	2 cut(s)	319, 620
AlwI	GGATC	2 cut(s)	902, 915
ApoI	RAATTY	2 cut(s)	340, 872
AsuC2I	CCSGG	1 cut(s)	434
AsuHPI	GGTGA	3 cut(s)	700, 944, 1025
BamHI	GGATCC	1 cut(s)	907
BauI	CACGAG	1 cut(s)	191
BbsI	GAAGAC	1 cut(s)	831
BccI	CCATC	3 cut(s)	54, 1024, 1059
BceAI	ACGGC	1 cut(s)	68
BclI	TGATCA	2 cut(s)	246, 705
BcnI	CCSGG	1 cut(s)	434
BcoDI	GTCTC	2 cut(s)	319, 620
BfaI	CTAG	1 cut(s)	677
BglII	AGATCT	2 cut(s)	94, 294
BisI	GCNGC	1 cut(s)	693
BlsI	GCNGC	1 cut(s)	694
Bme1390I	CCNGG	1 cut(s)	434
BmiI	GGNNCC	2 cut(s)	65, 909
BmrFI	CCNGG	1 cut(s)	434
BmsI	GCATC	1 cut(s)	388
BoxI	GACNNNNGTC	1 cut(s)	597
BpiI	GAAGAC	1 cut(s)	831
BplI	GAGNNNNNCTC	2 cut(s)	210, 242
BpuEI	CTTGAG	1 cut(s)	389
BpuMI	CCSGG	1 cut(s)	434
BsaI	GGTCTC	1 cut(s)	319
BsaJI	CCNNGG	2 cut(s)	449, 1041
BsaWI	WCCGGW	2 cut(s)	382, 698
Bse1I	ACTGG	1 cut(s)	1006
Bse3DI	GCAATG	1 cut(s)	118
BseDI	CCNNGG	2 cut(s)	449, 1041
BseGI	GGATG	2 cut(s)	365, 379
BseMI	GCAATG	1 cut(s)	118
BseMII	CTCAG	2 cut(s)	51, 1006
BseNI	ACTGG	1 cut(s)	1006
Bsh1236I	CGCG	2 cut(s)	512, 692
Bsh1285I	CGRYCG	1 cut(s)	699
BsiEI	CGRYCG	1 cut(s)	699
BsiSI	CCGG	3 cut(s)	383, 434, 699
BsiWI	CGTACG	1 cut(s)	768
BslFI	GGGAC	1 cut(s)	589
BsmAI	GTCTC	2 cut(s)	319, 620
BsmFI	GGGAC	1 cut(s)	589
BsmI	GAATGC	1 cut(s)	462
Bso31I	GGTCTC	1 cut(s)	319
Bsp1407I	TGTACA	1 cut(s)	213
Bsp143I	GATC	5 cut(s)	94, 246, 294, 705, 907
BspACI	CCGC	4 cut(s)	311, 491, 510, 692
BspCNI	CTCAG	2 cut(s)	50, 1005
BspFNI	CGCG	2 cut(s)	512, 692
BspLI	GGNNCC	2 cut(s)	65, 909
BspPI	GGATC	2 cut(s)	902, 915
BspTNI	GGTCTC	1 cut(s)	319
BsrDI	GCAATG	1 cut(s)	118
BsrGI	TGTACA	1 cut(s)	213
BsrI	ACTGG	1 cut(s)	1006
BssECI	CCNNGG	2 cut(s)	449, 1041
BssMI	GATC	5 cut(s)	94, 246, 294, 705, 907
BssNAI	GTATAC	3 cut(s)	224, 413, 717
BssSI	CACGAG	1 cut(s)	191
BssT1I	CCWWGG	1 cut(s)	1041
Bst1107I	GTATAC	3 cut(s)	224, 413, 717
Bst2BI	CACGAG	1 cut(s)	191
Bst4CI	ACNGT	2 cut(s)	236, 450
Bst6I	CTCTTC	2 cut(s)	810, 876
BstAUI	TGTACA	1 cut(s)	213
BstDEI	CTNAG	6 cut(s)	37, 88, 388, 587, 848, 992
BstDSI	CCRYGG	1 cut(s)	449
BstF5I	GGATG	2 cut(s)	365, 379
BstFNI	CGCG	2 cut(s)	512, 692
BstKTI	GATC	5 cut(s)	97, 249, 297, 708, 910
BstMAI	GTCTC	2 cut(s)	319, 620
BstMBI	GATC	5 cut(s)	94, 246, 294, 705, 907
BstMCI	CGRYCG	1 cut(s)	699
BstNSI	RCATGY	1 cut(s)	904
BstPAI	GACNNNNGTC	1 cut(s)	597
BstSCI	CCNGG	1 cut(s)	432
BstUI	CGCG	2 cut(s)	512, 692
BstV2I	GAAGAC	1 cut(s)	831
BstX2I	RGATCY	3 cut(s)	94, 294, 907
BstXI	CCANNNNNNTGG	1 cut(s)	877
BstYI	RGATCY	3 cut(s)	94, 294, 907
BstZ17I	GTATAC	3 cut(s)	224, 413, 717
BtgI	CCRYGG	1 cut(s)	449
BtsCI	GGATG	2 cut(s)	365, 379
BtsI	GCAGTG	1 cut(s)	799
BtsIMutI	CAGTG	1 cut(s)	799
Csp6I	GTAC	4 cut(s)	83, 214, 769, 999
CviAII	CATG	3 cut(s)	261, 644, 901
CviJI	RGCY	5 cut(s)	106, 164, 257, 586, 732
CviKI_1	RGCY	5 cut(s)	106, 164, 257, 586, 732
CviQI	GTAC	4 cut(s)	83, 214, 769, 999
DdeI	CTNAG	6 cut(s)	37, 88, 388, 587, 848, 992
DpnI	GATC	5 cut(s)	96, 248, 296, 707, 909
DpnII	GATC	5 cut(s)	94, 246, 294, 705, 907
DrdI	GACNNNNNNGTC	1 cut(s)	311
DseDI	GACNNNNNNGTC	1 cut(s)	311
Eam1104I	CTCTTC	2 cut(s)	810, 876
EarI	CTCTTC	2 cut(s)	810, 876
Eco130I	CCWWGG	1 cut(s)	1041
Eco31I	GGTCTC	1 cut(s)	319
Eco32I	GATATC	1 cut(s)	867
Eco57I	CTGAAG	2 cut(s)	160, 168
EcoRV	GATATC	1 cut(s)	867
EcoT14I	CCWWGG	1 cut(s)	1041
ErhI	CCWWGG	1 cut(s)	1041
FaeI	CATG	3 cut(s)	264, 647, 904
FalI	AAGNNNNNCTT	4 cut(s)	71, 103, 963, 995
FaqI	GGGAC	1 cut(s)	589
FatI	CATG	3 cut(s)	260, 643, 900
FbaI	TGATCA	2 cut(s)	246, 705
FblI	GTMKAC	3 cut(s)	223, 412, 716
Fnu4HI	GCNGC	1 cut(s)	693
FokI	GGATG	2 cut(s)	366, 372
Fsp4HI	GCNGC	1 cut(s)	693
FspBI	CTAG	1 cut(s)	677
GluI	GCNGC	1 cut(s)	693
HapII	CCGG	3 cut(s)	383, 434, 699
Hin1II	CATG	3 cut(s)	264, 647, 904
HinfI	GANTC	6 cut(s)	196, 529, 566, 805, 844, 891
HpaII	CCGG	3 cut(s)	383, 434, 699
HphI	GGTGA	3 cut(s)	700, 944, 1025
Hpy166II	GTNNAC	3 cut(s)	224, 413, 717
Hpy188I	TCNGA	4 cut(s)	40, 280, 859, 995
Hpy188III	TCNNGA	6 cut(s)	193, 302, 368, 519, 617, 677
Hpy8I	GTNNAC	3 cut(s)	224, 413, 717
Hpy99I	CGWCG	1 cut(s)	966
HpyAV	CCTTC	5 cut(s)	73, 148, 512, 614, 653
HpyCH4III	ACNGT	2 cut(s)	236, 450
HpyCH4IV	ACGT	2 cut(s)	409, 767
HpyCH4V	TGCA	4 cut(s)	111, 404, 748, 792
HpyF3I	CTNAG	6 cut(s)	37, 88, 388, 587, 848, 992
HpySE526I	ACGT	2 cut(s)	409, 767
Hsp92II	CATG	3 cut(s)	264, 647, 904
Ksp22I	TGATCA	2 cut(s)	246, 705
Kzo9I	GATC	5 cut(s)	94, 246, 294, 705, 907
LpnPI	CCDG	6 cut(s)	252, 396, 447, 630, 712, 987
LweI	GCATC	1 cut(s)	388
MaeI	CTAG	1 cut(s)	677
MaeII	ACGT	2 cut(s)	409, 767
MaeIII	GTNAC	4 cut(s)	302, 332, 444, 590
MalI	GATC	5 cut(s)	96, 248, 296, 707, 909
MboI	GATC	5 cut(s)	94, 246, 294, 705, 907
MflI	RGATCY	3 cut(s)	94, 294, 907
MluCI	AATT	4 cut(s)	340, 350, 612, 872
MlyI	GAGTC	1 cut(s)	814
MmeI	TCCRAC	2 cut(s)	885, 900
MnlI	CCTC	6 cut(s)	6, 167, 212, 356, 877, 1004
MseI	TTAA	2 cut(s)	552, 636
MslI	CAYNNNNRTG	3 cut(s)	560, 994, 1011
MspI	CCGG	3 cut(s)	383, 434, 699
MspR9I	CCNGG	1 cut(s)	434
Mva1269I	GAATGC	1 cut(s)	462
MvnI	CGCG	2 cut(s)	512, 692
NciI	CCSGG	1 cut(s)	434
NdeII	GATC	5 cut(s)	94, 246, 294, 705, 907
NlaIII	CATG	3 cut(s)	264, 647, 904
NlaIV	GGNNCC	2 cut(s)	65, 909
NmuCI	GTSAC	3 cut(s)	302, 332, 590
NspI	RCATGY	1 cut(s)	904
PciI	ACATGT	1 cut(s)	900
PctI	GAATGC	1 cut(s)	462
PfeI	GAWTC	5 cut(s)	196, 529, 566, 844, 891
Pfl23II	CGTACG	1 cut(s)	768
PkrI	GCNGC	1 cut(s)	694
PleI	GAGTC	1 cut(s)	813
PpsI	GAGTC	1 cut(s)	813
PscI	ACATGT	1 cut(s)	900
PshAI	GACNNNNGTC	1 cut(s)	597
PspLI	CGTACG	1 cut(s)	768
PspN4I	GGNNCC	2 cut(s)	65, 909
PsrI	GAACNNNNNNTAC	2 cut(s)	942, 974
PsuI	RGATCY	3 cut(s)	94, 294, 907
RsaI	GTAC	4 cut(s)	84, 215, 770, 1000
RsaNI	GTAC	4 cut(s)	83, 214, 769, 999
RseI	CAYNNNNRTG	3 cut(s)	560, 994, 1011
SaqAI	TTAA	2 cut(s)	552, 636
SatI	GCNGC	1 cut(s)	693
Sau3AI	GATC	5 cut(s)	94, 246, 294, 705, 907
SchI	GAGTC	1 cut(s)	814
ScrFI	CCNGG	1 cut(s)	434
SfaNI	GCATC	1 cut(s)	388
SmiMI	CAYNNNNRTG	3 cut(s)	560, 994, 1011
SmlI	CTYRAG	1 cut(s)	368
SmoI	CTYRAG	1 cut(s)	368
Sse9I	AATT	4 cut(s)	340, 350, 612, 872
SsiI	CCGC	4 cut(s)	311, 491, 510, 692
SspMI	CTAG	1 cut(s)	677
StyD4I	CCNGG	1 cut(s)	432
StyI	CCWWGG	1 cut(s)	1041
TaaI	ACNGT	2 cut(s)	236, 450
TaiI	ACGT	2 cut(s)	412, 770
TaqI	TCGA	2 cut(s)	23, 102
TasI	AATT	4 cut(s)	340, 350, 612, 872
TatI	WGTACW	2 cut(s)	213, 998
TauI	GCSGC	1 cut(s)	695
TfiI	GAWTC	5 cut(s)	196, 529, 566, 844, 891
Tru1I	TTAA	2 cut(s)	552, 636
Tru9I	TTAA	2 cut(s)	552, 636
TscAI	CASTG	1 cut(s)	799
TseFI	GTSAC	3 cut(s)	302, 332, 590
Tsp45I	GTSAC	3 cut(s)	302, 332, 590
TspDTI	ATGAA	5 cut(s)	521, 632, 857, 954, 983
TspGWI	ACGGA	2 cut(s)	551, 786
TspRI	CASTG	1 cut(s)	799
XapI	RAATTY	2 cut(s)	340, 872
XbaI	TCTAGA	1 cut(s)	676
XceI	RCATGY	1 cut(s)	904
XmiI	GTMKAC	3 cut(s)	223, 412, 716
XspI	CTAG	1 cut(s)	677

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.