Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0021925

Physical Location & Seq

Genomic Coordinates Forward (+)

21395297 .. 21397244

Gene Structure 1948 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G57760.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1137 bp

ATGGATTGGTTGAGAACAAAAAGAATCAGAGCCAAGAAAAGGAAGAGGAATGTCAAAGAGAATGGCGAGGTTGTTCTAAAAGAGCTCATTGAATGTTGTGATGGAAAATGCAATCCTATCAAGAACTTCTCTTACGACCAGATCATCAAAGCAACAAATAACTTCTGCCAAAGTAACCGTGCTTCTCGGATTGATGTTTATTACCGTTGCTATAAAGGCATGCTTGATGACCGGCCAGTGCTCATCAAGAAAGGGAAATACACACTTGATATGAAAGAGATTTGTCGCGACATAGCTATCTCATCGATGGTTAGTGGTCATAAGAACTTCCTCAAACTATTGGGATGTTGTCTTGAGTTCACTCCTCCTGTCTTAGTTTTTGAGTATGCAGAGGTTATAACTCTTGGTCCATTGCTTACATCTCATCCGGGATATCTGAGGAGGATAAAGATAGCAAGAGAGGTCGCAAATGCTTTGACTTACCTTCACACAGCATTCTCAAGAGTTTTCATCCATTCGAATCTAGATCCTTTCACCATTTTCTTAGATGGAAATGGGGTCGCAAAGCTCGGGAATTTCTGCAACTGTATCACAATTCCAGAAGGAGAGACATTTGTTCATGATGATACATTACAGAAATACCATGAGTTGAGGCATAATACATTAAAGGGGACACATGGGCTTGGTGTATGTAACTTACCGGTCATTGATCCCGACTACAAATCAACCGGTAAAGTCACGACAAAGACTGATATGCACAGCTTTGGAGGATTCATGCTAGCTCTTGTGCAGATAAGGGAAGTTGATGATGAGCTATCTCTATCTTCGGATATGCTGAGAGCATTAGCTGACTTGTTCATCAAACCTTATGATGATGTTCGCTATGTTCACTTCCCGCTTCACCATCATGTTTCTAAGATACTGAGGAAGTTTGGGTATGCAGAGGTTGTAGATTCAGATATGAGCGAGGTAGCTGCTTGGCCAATTAAAGCCTTTCTTAGATTAGCGTTGAGATGCATTGGATGCAAGTTGGGAGACCCGTTGAGTAGCATGATTCAAGTGACGAAAGAGCTCAGGCTGATTGAGAAATCTGCATATTATCCATCAAACAACAGATCACAGATGAGCTCCATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050829 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

378

Amino Acids

43.08

Weight (kDa)

8.96

Isoelectric Point (pI)

33.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	76 - 201	1.6e-09	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	90 - 211	3.8e-07	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0021925)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57760 AT3G57760 AT3G57760 AT3G57760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	398
AccII	CGCG	1 cut(s)	288
AciI	CCGC	1 cut(s)	896
AclWI	GGATC	2 cut(s)	521, 704
AcoI	YGGCCR	2 cut(s)	233, 980
AcsI	RAATTY	1 cut(s)	574
AfiI	CCNNNNNNNGG	1 cut(s)	39
AgeI	ACCGGT	2 cut(s)	700, 728
AgsI	TTSAA	2 cut(s)	92, 1058
Alw21I	GWGCWC	4 cut(s)	87, 243, 1074, 1130
Alw26I	GTCTC	2 cut(s)	602, 1029
AlwI	GGATC	2 cut(s)	521, 704
Ama87I	CYCGRG	1 cut(s)	569
AoxI	GGCC	2 cut(s)	233, 980
ApeKI	GCWGC	1 cut(s)	974
ApoI	RAATTY	1 cut(s)	574
AsiGI	ACCGGT	2 cut(s)	700, 728
AspS9I	GGNCC	1 cut(s)	407
AsuC2I	CCSGG	1 cut(s)	429
AsuHPI	GGTGA	2 cut(s)	526, 893
AsuII	TTCGAA	1 cut(s)	518
AsuNHI	GCTAGC	1 cut(s)	778
AvaI	CYCGRG	1 cut(s)	569
AvaII	GGWCC	1 cut(s)	407
BalI	TGGCCA	1 cut(s)	982
BanII	GRGCYC	3 cut(s)	87, 1074, 1130
BarI	GAAGNNNNNNTAC	2 cut(s)	166, 198
Bbv12I	GWGCWC	4 cut(s)	87, 243, 1074, 1130
BbvI	GCAGC	1 cut(s)	961
BccI	CCATC	5 cut(s)	95, 301, 542, 912, 1111
BcgI	CGANNNNNNTGC	2 cut(s)	956, 990
BcnI	CCSGG	1 cut(s)	429
BcoDI	GTCTC	2 cut(s)	602, 1029
BfaI	CTAG	2 cut(s)	524, 779
BisI	GCNGC	1 cut(s)	975
BlsI	GCNGC	1 cut(s)	976
Bme1390I	CCNGG	1 cut(s)	429
Bme18I	GGWCC	1 cut(s)	407
BmeT110I	CYCGRG	1 cut(s)	569
BmgT120I	GGNCC	1 cut(s)	407
BmrFI	CCNGG	1 cut(s)	429
BmsI	GCATC	2 cut(s)	1004, 1013
BmtI	GCTAGC	1 cut(s)	782
Bpu10I	CCTNAGC	1 cut(s)	1073
Bpu14I	TTCGAA	1 cut(s)	518
BpuEI	CTTGAG	2 cut(s)	374, 484
BpuMI	CCSGG	1 cut(s)	429
Bsa29I	ATCGAT	1 cut(s)	305
BsaI	GGTCTC	1 cut(s)	1029
BsaWI	WCCGGW	2 cut(s)	700, 728
Bsc4I	CCNNNNNNNGG	1 cut(s)	39
Bse118I	RCCGGY	3 cut(s)	231, 700, 728
Bse1I	ACTGG	1 cut(s)	236
Bse3DI	GCAATG	1 cut(s)	410
BseCI	ATCGAT	1 cut(s)	305
BseGI	GGATG	4 cut(s)	350, 424, 510, 1028
BseLI	CCNNNNNNNGG	1 cut(s)	39
BseMI	GCAATG	1 cut(s)	410
BseMII	CTCAG	4 cut(s)	428, 827, 914, 1087
BseNI	ACTGG	1 cut(s)	236
BseRI	GAGGAG	2 cut(s)	354, 454
BseXI	GCAGC	1 cut(s)	961
BsgI	GTGCAG	1 cut(s)	809
Bsh1236I	CGCG	1 cut(s)	288
BshFI	GGCC	2 cut(s)	235, 982
BshTI	ACCGGT	2 cut(s)	700, 728
BshVI	ATCGAT	1 cut(s)	305
BsiHKAI	GWGCWC	4 cut(s)	87, 243, 1074, 1130
BsiHKCI	CYCGRG	1 cut(s)	569
BsiSI	CCGG	4 cut(s)	232, 428, 701, 729
BslFI	GGGAC	1 cut(s)	685
BslI	CCNNNNNNNGG	1 cut(s)	39
BsmAI	GTCTC	2 cut(s)	602, 1029
BsmFI	GGGAC	1 cut(s)	685
BsmI	GAATGC	1 cut(s)	494
BsnI	GGCC	2 cut(s)	235, 982
Bso31I	GGTCTC	1 cut(s)	1029
BsoBI	CYCGRG	1 cut(s)	569
Bsp119I	TTCGAA	1 cut(s)	518
Bsp1286I	GDGCHC	4 cut(s)	87, 243, 1074, 1130
Bsp143I	GATC	4 cut(s)	141, 526, 709, 1115
Bsp68I	TCGCGA	1 cut(s)	288
BspACI	CCGC	1 cut(s)	896
BspANI	GGCC	2 cut(s)	235, 982
BspCNI	CTCAG	4 cut(s)	429, 828, 915, 1086
BspDI	ATCGAT	1 cut(s)	305
BspFNI	CGCG	1 cut(s)	288
BspHI	TCATGA	1 cut(s)	619
BspOI	GCTAGC	1 cut(s)	782
BspPI	GGATC	2 cut(s)	521, 704
BspT104I	TTCGAA	1 cut(s)	518
BspTNI	GGTCTC	1 cut(s)	1029
BsrDI	GCAATG	1 cut(s)	410
BsrFI	RCCGGY	3 cut(s)	231, 700, 728
BsrI	ACTGG	1 cut(s)	236
BssAI	RCCGGY	3 cut(s)	231, 700, 728
BssMI	GATC	4 cut(s)	141, 526, 709, 1115
Bst4CI	ACNGT	3 cut(s)	179, 206, 587
Bst6I	CTCTTC	1 cut(s)	38
BstAPI	GCANNNNNTGC	1 cut(s)	1023
BstBI	TTCGAA	1 cut(s)	518
BstC8I	GCNNGC	2 cut(s)	221, 780
BstDEI	CTNAG	8 cut(s)	373, 437, 544, 836, 915, 923, 998, 1073
BstF5I	GGATG	4 cut(s)	350, 424, 510, 1028
BstFNI	CGCG	1 cut(s)	288
BstKTI	GATC	4 cut(s)	144, 529, 712, 1118
BstMAI	GTCTC	2 cut(s)	602, 1029
BstMBI	GATC	4 cut(s)	141, 526, 709, 1115
BstMWI	GCNNNNNNNGC	2 cut(s)	216, 1023
BstNSI	RCATGY	1 cut(s)	223
BstSCI	CCNGG	1 cut(s)	427
BstUI	CGCG	1 cut(s)	288
BstV1I	GCAGC	1 cut(s)	961
BstX2I	RGATCY	1 cut(s)	526
BstYI	RGATCY	1 cut(s)	526
Bsu15I	ATCGAT	1 cut(s)	305
BsuRI	GGCC	2 cut(s)	235, 982
BsuTUI	ATCGAT	1 cut(s)	305
BtsCI	GGATG	4 cut(s)	350, 424, 510, 1028
BtsIMutI	CAGTG	1 cut(s)	243
BtuMI	TCGCGA	1 cut(s)	288
Cac8I	GCNNGC	2 cut(s)	221, 780
CciI	TCATGA	1 cut(s)	619
Cfr10I	RCCGGY	3 cut(s)	231, 700, 728
Cfr13I	GGNCC	1 cut(s)	407
ClaI	ATCGAT	1 cut(s)	305
CspAI	ACCGGT	2 cut(s)	700, 728
CviAII	CATG	7 cut(s)	220, 620, 644, 677, 775, 908, 1051
DdeI	CTNAG	8 cut(s)	373, 437, 544, 836, 915, 923, 998, 1073
DpnI	GATC	4 cut(s)	143, 528, 711, 1117
DpnII	GATC	4 cut(s)	141, 526, 709, 1115
EaeI	YGGCCR	2 cut(s)	233, 980
Eam1104I	CTCTTC	1 cut(s)	38
EarI	CTCTTC	1 cut(s)	38
Ecl136II	GAGCTC	3 cut(s)	85, 1072, 1128
Eco24I	GRGCYC	3 cut(s)	87, 1074, 1130
Eco31I	GGTCTC	1 cut(s)	1029
Eco32I	GATATC	1 cut(s)	434
Eco47I	GGWCC	1 cut(s)	407
Eco53kI	GAGCTC	3 cut(s)	85, 1072, 1128
Eco88I	CYCGRG	1 cut(s)	569
EcoICRI	GAGCTC	3 cut(s)	85, 1072, 1128
EcoRV	GATATC	1 cut(s)	434
EcoT22I	ATGCAT	1 cut(s)	1019
EcoT38I	GRGCYC	3 cut(s)	87, 1074, 1130
FaeI	CATG	7 cut(s)	223, 623, 647, 680, 778, 911, 1054
FalI	AAGNNNNNCTT	4 cut(s)	207, 239, 981, 1013
FaqI	GGGAC	1 cut(s)	685
FatI	CATG	7 cut(s)	219, 619, 643, 676, 774, 907, 1050
FauI	CCCGC	1 cut(s)	903
FauNDI	CATATG	1 cut(s)	1133
Fnu4HI	GCNGC	1 cut(s)	975
FokI	GGATG	4 cut(s)	357, 411, 497, 1035
FriOI	GRGCYC	3 cut(s)	87, 1074, 1130
Fsp4HI	GCNGC	1 cut(s)	975
FspBI	CTAG	2 cut(s)	524, 779
GluI	GCNGC	1 cut(s)	975
HaeIII	GGCC	2 cut(s)	235, 982
HapII	CCGG	4 cut(s)	232, 428, 701, 729
Hin1II	CATG	7 cut(s)	223, 623, 647, 680, 778, 911, 1054
HinfI	GANTC	5 cut(s)	24, 520, 771, 953, 1054
HpaII	CCGG	4 cut(s)	232, 428, 701, 729
HphI	GGTGA	2 cut(s)	526, 893
Hpy166II	GTNNAC	2 cut(s)	360, 889
Hpy188I	TCNGA	5 cut(s)	29, 189, 438, 829, 958
Hpy8I	GTNNAC	2 cut(s)	360, 889
HpyAV	CCTTC	2 cut(s)	494, 596
HpyCH4III	ACNGT	3 cut(s)	179, 206, 587
HpyCH4V	TGCA	9 cut(s)	111, 389, 582, 757, 790, 941, 1017, 1026, 1094
HpyF10VI	GCNNNNNNNGC	2 cut(s)	216, 1023
HpyF3I	CTNAG	8 cut(s)	373, 437, 544, 836, 915, 923, 998, 1073
Hsp92II	CATG	7 cut(s)	223, 623, 647, 680, 778, 911, 1054
Kzo9I	GATC	4 cut(s)	141, 526, 709, 1115
LmnI	GCTCC	1 cut(s)	1133
LpnPI	CCDG	9 cut(s)	152, 245, 249, 381, 441, 612, 714, 742, 1060
Lsp1109I	GCAGC	1 cut(s)	961
LweI	GCATC	2 cut(s)	1004, 1013
MaeI	CTAG	2 cut(s)	524, 779
MaeIII	GTNAC	4 cut(s)	173, 692, 736, 1060
MalI	GATC	4 cut(s)	143, 528, 711, 1117
MboI	GATC	4 cut(s)	141, 526, 709, 1115
MboII	GAAGA	2 cut(s)	55, 816
MflI	RGATCY	1 cut(s)	526
MhlI	GDGCHC	4 cut(s)	87, 243, 1074, 1130
MlsI	TGGCCA	1 cut(s)	982
MluCI	AATT	3 cut(s)	574, 594, 984
MluNI	TGGCCA	1 cut(s)	982
Mox20I	TGGCCA	1 cut(s)	982
Mph1103I	ATGCAT	1 cut(s)	1019
MscI	TGGCCA	1 cut(s)	982
MseI	TTAA	2 cut(s)	665, 987
MslI	CAYNNNNRTG	1 cut(s)	906
Msp20I	TGGCCA	1 cut(s)	982
MspI	CCGG	4 cut(s)	232, 428, 701, 729
MspR9I	CCNGG	1 cut(s)	429
Mva1269I	GAATGC	1 cut(s)	494
MvnI	CGCG	1 cut(s)	288
MwoI	GCNNNNNNNGC	2 cut(s)	216, 1023
NciI	CCSGG	1 cut(s)	429
NdeI	CATATG	1 cut(s)	1133
NdeII	GATC	4 cut(s)	141, 526, 709, 1115
NheI	GCTAGC	1 cut(s)	778
NlaIII	CATG	7 cut(s)	223, 623, 647, 680, 778, 911, 1054
NmuCI	GTSAC	2 cut(s)	736, 1060
NruI	TCGCGA	1 cut(s)	288
NsiI	ATGCAT	1 cut(s)	1019
NspI	RCATGY	1 cut(s)	223
NspV	TTCGAA	1 cut(s)	518
PaeI	GCATGC	1 cut(s)	223
PagI	TCATGA	1 cut(s)	619
PctI	GAATGC	1 cut(s)	494
PfeI	GAWTC	5 cut(s)	24, 520, 771, 953, 1054
PfoI	TCCNGGA	1 cut(s)	427
PinAI	ACCGGT	2 cut(s)	700, 728
PkrI	GCNGC	1 cut(s)	976
PsiI	TTATAA	1 cut(s)	398
Psp124BI	GAGCTC	3 cut(s)	87, 1074, 1130
PspPI	GGNCC	1 cut(s)	407
PsrI	GAACNNNNNNTAC	2 cut(s)	116, 148
PsuI	RGATCY	1 cut(s)	526
RruI	TCGCGA	1 cut(s)	288
RseI	CAYNNNNRTG	1 cut(s)	906
SacI	GAGCTC	3 cut(s)	87, 1074, 1130
SaqAI	TTAA	2 cut(s)	665, 987
SatI	GCNGC	1 cut(s)	975
Sau3AI	GATC	4 cut(s)	141, 526, 709, 1115
Sau96I	GGNCC	1 cut(s)	407
ScrFI	CCNGG	1 cut(s)	429
SduI	GDGCHC	4 cut(s)	87, 243, 1074, 1130
SfaNI	GCATC	2 cut(s)	1004, 1013
SfuI	TTCGAA	1 cut(s)	518
SinI	GGWCC	1 cut(s)	407
SmiMI	CAYNNNNRTG	1 cut(s)	906
SmlI	CTYRAG	2 cut(s)	353, 499
SmoI	CTYRAG	2 cut(s)	353, 499
SphI	GCATGC	1 cut(s)	223
Sse9I	AATT	3 cut(s)	574, 594, 984
SsiI	CCGC	1 cut(s)	896
SspMI	CTAG	2 cut(s)	524, 779
SstI	GAGCTC	3 cut(s)	87, 1074, 1130
StyD4I	CCNGG	1 cut(s)	427
TaaI	ACNGT	3 cut(s)	179, 206, 587
TaqI	TCGA	2 cut(s)	305, 518
TasI	AATT	3 cut(s)	574, 594, 984
TfiI	GAWTC	5 cut(s)	24, 520, 771, 953, 1054
Tru1I	TTAA	2 cut(s)	665, 987
Tru9I	TTAA	2 cut(s)	665, 987
TscAI	CASTG	1 cut(s)	243
TseFI	GTSAC	2 cut(s)	736, 1060
TseI	GCWGC	1 cut(s)	974
Tsp45I	GTSAC	2 cut(s)	736, 1060
TspDTI	ATGAA	5 cut(s)	287, 499, 608, 763, 847
TspRI	CASTG	1 cut(s)	243
VpaK11BI	GGWCC	1 cut(s)	407
XapI	RAATTY	1 cut(s)	574
XbaI	TCTAGA	1 cut(s)	523
XceI	RCATGY	1 cut(s)	223
XspI	CTAG	2 cut(s)	524, 779
Zsp2I	ATGCAT	1 cut(s)	1019

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.