Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0027059

Physical Location & Seq

Genomic Coordinates Reverse (-)

2385038 .. 2388105

Gene Structure 3068 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G04700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1458 bp

ATGGGTTGCTTCAGCAGTAAGGAGCTACAACAATCGAAAAGAACCATTCTTGAGAAACCTTTAGTTGACATCACAAAGATTTATATCCTCGGGGAGGAATTGGGTAGAGGTAATTTCGGTCTAACCCGAAAGTGCGTTGAGAAATCTACAGGTAAGACATTCGCCTGCAAAACCATTCTCAAGACAAAGCTAAAGGACGAAGAATGTGAAGAAGACGTGAAGAGAGAGATTCGGATTATGAAGCAATTGTCTGGAGAACCAAACATTGTCGAGTTCAAGAATGCTTACGAGGACAAAGATTCTGTACATATTGTTATGGAATATTGTGGTGGTGGAGAGTTATACGACAAGATCCTAGCTTTGTACGATGTTGGGAAGTCTTACTCGGAGAAAGAAGCTGCTGGAATCATTAGGTCGATTGTGAATGTTGTGAAGAATTGCCATTACATGGGTGTGATGCATCGTGATCTAAAGCCTGAGAATTTCTTGCTTACGAGTAACGATGACAATGCTACGGTCAAAGTTATTGACTTTGGGTGTTCTGTGTTCATTGAAGAAGGAAAAGTATACCAGGATTTAGCTGGGAGTGATTACTACATTGCTCCTGAAGTGTTACAGGGAAATTACGGTAAAGAAGCGGACATTTGGAGTGCAGGGATTATATTATACATCCTACTCTGTGGCAAATCTCCCTTTGTGAAAGAACCTGAGGGACAGATGTTCAATGAGATTAAGAGTTTGGAAATCGACTACAGCGAGGAACCATGGCCTCTTAGAGATTCAAGGGCAATACATCTTGTCAAGAGGATGCTTGATAGAAACCCCAAGGAACGAATCTCTGCTGCAGAGGTTCTTGGACATCCTTGGATGAAAGAAGGAGAAGCTTCGGATAAGCCTATTGATGGCGTTGTTTTATCCCGTTTGAAGAGATTTCGAGATGCGAACAAGTTTAAGAAGGTAGTTCTAAAGTTTATTGCAGCAAATCTATCAGAAGAGGAAATCAAAGGTCTTAAGACACTGTTCACCAACATAGATACTGACAAAAGTGGAAATATTACTCTTGAAGAACTCAAAACAGGTCTTACTAGACTTGGATCTAACCTCTCTAAAACCGAAGTGGAGCAACTCATGGAAGCTGCTGATATGGATGGTAATGGAACAATCGACATAGACGAGTTTATTTCTGCAACGATGCATAGATACAAATTGGATAGAGATGAACATGTGTACAAAGCATTCCAACACTTTGACAAAGACAACGACGGGCACATAACGAAGGAAGAGTTGGAGATGGCGATGAAGGAGGATGGTGCGGGAGATGAAGGTAGCATCAAACAAATCATAGCCGATGCTGATACCGATAATGATGGAAAAATAAACTTTGAGGAATTCCGCACAATGATGAGAACTGAGAGCAGCTTGCAGCCAGAAGGGGAACTTCTTCCGATCATCAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009506 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009751 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0019899 GO:0019902 GO:0019903 GO:0023052 GO:0030054 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0042493 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046677 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04626 ko05145 map04626 map05145

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 EF-hand_7 Pkinase

Protein Analysis

485

Amino Acids

54.9

Weight (kDa)

5.05

Isoelectric Point (pI)

41.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	29 - 290	6.9e-71	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	30 - 284	3.1e-28	Protein tyrosine and serine/threonine kinase
Kdo	PF06293	119 - 179	5.3e-06	Lipopolysaccharide kinase (Kdo/WaaP) family
EF-hand_7	PF13499	336 - 397	1e-12	EF-hand domain pair
EF-hand_8	PF13833	349 - 397	3.8e-08	EF-hand domain pair
EF-hand_7	PF13499	407 - 469	5e-15	EF-hand domain pair
EF-hand_1	PF00036	409 - 435	9.5e-08	EF hand domain
EF-hand_6	PF13405	410 - 435	6.8e-07	EF-hand domain
EF-hand_1	PF00036	444 - 470	1.3e-08	EF hand domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0027059)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G04695 AT4G04700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	448
AccI	GTMKAC	1 cut(s)	567
AciI	CCGC	3 cut(s)	638, 1313, 1393
AclWI	GGATC	2 cut(s)	346, 1102
AcsI	RAATTY	2 cut(s)	481, 1388
AcuI	CTGAAG	1 cut(s)	627
AfaI	GTAC	3 cut(s)	306, 365, 1229
AfiI	CCNNNNNNNGG	3 cut(s)	94, 448, 902
AflII	CTTAAG	1 cut(s)	1010
AflIII	ACRYGT	1 cut(s)	1222
AgsI	TTSAA	6 cut(s)	277, 554, 724, 783, 925, 1064
AjiI	CACGTC	1 cut(s)	217
AjnI	CCWGG	1 cut(s)	570
AjuI	GAANNNNNNNTTGG	2 cut(s)	1268, 1300
AluBI	AGCT	8 cut(s)	25, 190, 359, 398, 581, 884, 1136, 1419
AluI	AGCT	8 cut(s)	25, 190, 359, 398, 581, 884, 1136, 1419
AlwI	GGATC	2 cut(s)	346, 1102
Ama87I	CYCGRG	1 cut(s)	89
AoxI	GGCC	1 cut(s)	767
ApeKI	GCWGC	6 cut(s)	398, 842, 977, 1136, 1416, 1423
ApoI	RAATTY	2 cut(s)	481, 1388
Asp700I	GAANNNNTTC	1 cut(s)	1440
AsuHPI	GGTGA	1 cut(s)	1015
AvaI	CYCGRG	1 cut(s)	89
AxyI	CCTNAGG	1 cut(s)	708
BaeGI	GKGCMC	1 cut(s)	1269
BbsI	GAAGAC	1 cut(s)	219
BbvI	GCAGC	6 cut(s)	385, 829, 989, 1123, 1428, 1435
BccI	CCATC	5 cut(s)	896, 1142, 1285, 1301, 1361
BcgI	CGANNNNNNTGC	2 cut(s)	491, 525
BciT130I	CCWGG	1 cut(s)	572
BfaI	CTAG	2 cut(s)	356, 1086
BfmI	CTRYAG	3 cut(s)	147, 751, 843
BfrI	CTTAAG	1 cut(s)	1010
BisI	GCNGC	6 cut(s)	399, 843, 978, 1137, 1417, 1424
BlsI	GCNGC	6 cut(s)	400, 844, 979, 1138, 1418, 1425
Bme1390I	CCNGG	1 cut(s)	572
BmeT110I	CYCGRG	1 cut(s)	89
BmgBI	CACGTC	1 cut(s)	217
BmiI	GGNNCC	1 cut(s)	762
BmrFI	CCNGG	1 cut(s)	572
BmsI	GCATC	7 cut(s)	447, 469, 798, 928, 1182, 1338, 1339
BpiI	GAAGAC	1 cut(s)	219
BpmI	CTGGAG	1 cut(s)	273
BpuEI	CTTGAG	2 cut(s)	71, 164
BsaBI	GATNNNNATC	1 cut(s)	83
BsaJI	CCNNGG	4 cut(s)	88, 764, 825, 863
Bsc4I	CCNNNNNNNGG	3 cut(s)	94, 448, 902
Bse21I	CCTNAGG	1 cut(s)	708
Bse3DI	GCAATG	1 cut(s)	597
Bse8I	GATNNNNATC	1 cut(s)	83
BseBI	CCWGG	1 cut(s)	572
BseDI	CCNNGG	4 cut(s)	88, 764, 825, 863
BseGI	GGATG	6 cut(s)	669, 813, 859, 873, 1153, 1312
BseJI	GATNNNNATC	1 cut(s)	83
BseLI	CCNNNNNNNGG	3 cut(s)	94, 448, 902
BseMI	GCAATG	1 cut(s)	597
BseMII	CTCAG	3 cut(s)	468, 699, 1401
BseSI	GKGCMC	1 cut(s)	1269
BseXI	GCAGC	6 cut(s)	385, 829, 989, 1123, 1428, 1435
BseYI	CCCAGC	1 cut(s)	581
BsgI	GTGCAG	1 cut(s)	672
BshFI	GGCC	1 cut(s)	769
BsiHKCI	CYCGRG	1 cut(s)	89
BslFI	GGGAC	1 cut(s)	726
BslI	CCNNNNNNNGG	3 cut(s)	94, 448, 902
BsmFI	GGGAC	1 cut(s)	726
BsmI	GAATGC	2 cut(s)	286, 1235
BsnI	GGCC	1 cut(s)	769
BsoBI	CYCGRG	1 cut(s)	89
Bsp1286I	GDGCHC	1 cut(s)	1269
Bsp1407I	TGTACA	2 cut(s)	304, 1227
Bsp143I	GATC	4 cut(s)	351, 466, 1094, 1446
Bsp19I	CCATGG	1 cut(s)	764
BspACI	CCGC	3 cut(s)	638, 1313, 1393
BspANI	GGCC	1 cut(s)	769
BspCNI	CTCAG	3 cut(s)	469, 700, 1402
BspLI	GGNNCC	1 cut(s)	762
BspMAI	CTGCAG	1 cut(s)	847
BspPI	GGATC	2 cut(s)	346, 1102
BspTI	CTTAAG	1 cut(s)	1010
BsrDI	GCAATG	1 cut(s)	597
BsrGI	TGTACA	2 cut(s)	304, 1227
BssECI	CCNNGG	4 cut(s)	88, 764, 825, 863
BssMI	GATC	4 cut(s)	351, 466, 1094, 1446
BssNAI	GTATAC	1 cut(s)	568
BssT1I	CCWWGG	3 cut(s)	764, 825, 863
Bst1107I	GTATAC	1 cut(s)	568
Bst2UI	CCWGG	1 cut(s)	572
Bst4CI	ACNGT	3 cut(s)	517, 629, 1020
Bst6I	CTCTTC	4 cut(s)	215, 920, 987, 1275
BstAFI	CTTAAG	1 cut(s)	1010
BstAUI	TGTACA	2 cut(s)	304, 1227
BstC8I	GCNNGC	2 cut(s)	166, 1421
BstDEI	CTNAG	4 cut(s)	477, 708, 773, 1410
BstDSI	CCRYGG	1 cut(s)	764
BstENI	CCTNNNNNAGG	1 cut(s)	92
BstF5I	GGATG	6 cut(s)	669, 813, 859, 873, 1153, 1312
BstKTI	GATC	4 cut(s)	354, 469, 1097, 1449
BstMBI	GATC	4 cut(s)	351, 466, 1094, 1446
BstNI	CCWGG	1 cut(s)	572
BstNSI	RCATGY	1 cut(s)	1226
BstSCI	CCNGG	1 cut(s)	570
BstSFI	CTRYAG	3 cut(s)	147, 751, 843
BstSLI	GKGCMC	1 cut(s)	1269
BstV1I	GCAGC	6 cut(s)	385, 829, 989, 1123, 1428, 1435
BstV2I	GAAGAC	1 cut(s)	219
BstX2I	RGATCY	2 cut(s)	351, 1094
BstYI	RGATCY	2 cut(s)	351, 1094
BstZ17I	GTATAC	1 cut(s)	568
Bsu36I	CCTNAGG	1 cut(s)	708
BsuRI	GGCC	1 cut(s)	769
BtgI	CCRYGG	1 cut(s)	764
BtgZI	GCGATG	1 cut(s)	1310
BtrI	CACGTC	1 cut(s)	217
BtsCI	GGATG	6 cut(s)	669, 813, 859, 873, 1153, 1312
BtsIMutI	CAGTG	1 cut(s)	1016
Cac8I	GCNNGC	2 cut(s)	166, 1421
Csp6I	GTAC	3 cut(s)	305, 364, 1228
CviAII	CATG	4 cut(s)	448, 765, 1129, 1223
CviQI	GTAC	3 cut(s)	305, 364, 1228
DdeI	CTNAG	4 cut(s)	477, 708, 773, 1410
DpnI	GATC	4 cut(s)	353, 468, 1096, 1448
DpnII	GATC	4 cut(s)	351, 466, 1094, 1446
Eam1104I	CTCTTC	4 cut(s)	215, 920, 987, 1275
EarI	CTCTTC	4 cut(s)	215, 920, 987, 1275
Eco130I	CCWWGG	3 cut(s)	764, 825, 863
Eco57I	CTGAAG	1 cut(s)	627
Eco81I	CCTNAGG	1 cut(s)	708
Eco88I	CYCGRG	1 cut(s)	89
EcoNI	CCTNNNNNAGG	1 cut(s)	92
EcoRI	GAATTC	1 cut(s)	1388
EcoRII	CCWGG	1 cut(s)	570
EcoT14I	CCWWGG	3 cut(s)	764, 825, 863
EcoT22I	ATGCAT	2 cut(s)	462, 1197
ErhI	CCWWGG	3 cut(s)	764, 825, 863
FaeI	CATG	4 cut(s)	451, 768, 1132, 1226
FalI	AAGNNNNNCTT	2 cut(s)	1422, 1454
FaqI	GGGAC	1 cut(s)	726
FatI	CATG	4 cut(s)	447, 764, 1128, 1222
FauI	CCCGC	1 cut(s)	1306
FblI	GTMKAC	1 cut(s)	567
Fnu4HI	GCNGC	6 cut(s)	399, 843, 978, 1137, 1417, 1424
FokI	GGATG	6 cut(s)	656, 820, 846, 880, 1160, 1319
Fsp4HI	GCNGC	6 cut(s)	399, 843, 978, 1137, 1417, 1424
FspBI	CTAG	2 cut(s)	356, 1086
GluI	GCNGC	6 cut(s)	399, 843, 978, 1137, 1417, 1424
GsaI	CCCAGC	1 cut(s)	585
GsuI	CTGGAG	1 cut(s)	273
HaeIII	GGCC	1 cut(s)	769
Hin1II	CATG	4 cut(s)	451, 768, 1132, 1226
HincII	GTYRAC	1 cut(s)	67
HindII	GTYRAC	1 cut(s)	67
HindIII	AAGCTT	1 cut(s)	882
HinfI	GANTC	5 cut(s)	229, 299, 405, 779, 834
HphI	GGTGA	1 cut(s)	1015
Hpy166II	GTNNAC	4 cut(s)	67, 568, 1023, 1228
Hpy188I	TCNGA	5 cut(s)	234, 388, 889, 991, 1446
Hpy188III	TCNNGA	9 cut(s)	50, 181, 252, 277, 464, 605, 802, 935, 1061
Hpy8I	GTNNAC	4 cut(s)	67, 568, 1023, 1228
Hpy99I	CGWCG	1 cut(s)	1265
HpyAV	CCTTC	7 cut(s)	551, 869, 949, 1270, 1294, 1316, 1424
HpyCH4III	ACNGT	3 cut(s)	517, 629, 1020
HpyCH4IV	ACGT	1 cut(s)	216
HpyCH4V	TGCA	8 cut(s)	168, 460, 653, 845, 977, 1187, 1195, 1423
HpyF3I	CTNAG	4 cut(s)	477, 708, 773, 1410
HpySE526I	ACGT	1 cut(s)	216
Hsp92II	CATG	4 cut(s)	451, 768, 1132, 1226
Kzo9I	GATC	4 cut(s)	351, 466, 1094, 1446
LmnI	GCTCC	3 cut(s)	22, 607, 1120
Lsp1109I	GCAGC	6 cut(s)	385, 829, 989, 1123, 1428, 1435
LweI	GCATC	7 cut(s)	447, 469, 798, 928, 1182, 1338, 1339
MaeI	CTAG	2 cut(s)	356, 1086
MaeII	ACGT	1 cut(s)	216
MaeIII	GTNAC	2 cut(s)	497, 612
MalI	GATC	4 cut(s)	353, 468, 1096, 1448
MboI	GATC	4 cut(s)	351, 466, 1094, 1446
MfeI	CAATTG	2 cut(s)	245, 1453
MflI	RGATCY	2 cut(s)	351, 1094
MhlI	GDGCHC	1 cut(s)	1269
MluCI	AATT	9 cut(s)	98, 112, 245, 436, 481, 622, 1205, 1388, 1453
MmeI	TCCRAC	2 cut(s)	1264, 1266
Mph1103I	ATGCAT	2 cut(s)	462, 1197
MroXI	GAANNNNTTC	1 cut(s)	1440
MseI	TTAA	3 cut(s)	732, 951, 1011
MslI	CAYNNNNRTG	2 cut(s)	452, 1400
MspCI	CTTAAG	1 cut(s)	1010
MspR9I	CCNGG	1 cut(s)	572
MunI	CAATTG	2 cut(s)	245, 1453
Mva1269I	GAATGC	2 cut(s)	286, 1235
MvaI	CCWGG	1 cut(s)	572
NcoI	CCATGG	1 cut(s)	764
NdeII	GATC	4 cut(s)	351, 466, 1094, 1446
NlaIII	CATG	4 cut(s)	451, 768, 1132, 1226
NlaIV	GGNNCC	1 cut(s)	762
NsiI	ATGCAT	2 cut(s)	462, 1197
NspI	RCATGY	1 cut(s)	1226
PciI	ACATGT	1 cut(s)	1222
PcsI	WCGNNNNNNNCGW	2 cut(s)	753, 1170
PctI	GAATGC	2 cut(s)	286, 1235
PdmI	GAANNNNTTC	1 cut(s)	1440
PfeI	GAWTC	5 cut(s)	229, 299, 405, 779, 834
PflMI	CCANNNNNTGG	1 cut(s)	448
PkrI	GCNGC	6 cut(s)	400, 844, 979, 1138, 1418, 1425
PscI	ACATGT	1 cut(s)	1222
Psp6I	CCWGG	1 cut(s)	570
PspFI	CCCAGC	1 cut(s)	581
PspGI	CCWGG	1 cut(s)	570
PspN4I	GGNNCC	1 cut(s)	762
PstI	CTGCAG	1 cut(s)	847
PsuI	RGATCY	2 cut(s)	351, 1094
RsaI	GTAC	3 cut(s)	306, 365, 1229
RsaNI	GTAC	3 cut(s)	305, 364, 1228
RseI	CAYNNNNRTG	2 cut(s)	452, 1400
SaqAI	TTAA	3 cut(s)	732, 951, 1011
SatI	GCNGC	6 cut(s)	399, 843, 978, 1137, 1417, 1424
Sau3AI	GATC	4 cut(s)	351, 466, 1094, 1446
ScrFI	CCNGG	1 cut(s)	572
SduI	GDGCHC	1 cut(s)	1269
SfaNI	GCATC	7 cut(s)	447, 469, 798, 928, 1182, 1338, 1339
SfcI	CTRYAG	3 cut(s)	147, 751, 843
SmiMI	CAYNNNNRTG	2 cut(s)	452, 1400
SmlI	CTYRAG	3 cut(s)	50, 179, 1010
SmoI	CTYRAG	3 cut(s)	50, 179, 1010
Sse9I	AATT	9 cut(s)	98, 112, 245, 436, 481, 622, 1205, 1388, 1453
SsiI	CCGC	3 cut(s)	638, 1313, 1393
SspI	AATATT	2 cut(s)	323, 1054
SspMI	CTAG	2 cut(s)	356, 1086
StyD4I	CCNGG	1 cut(s)	570
StyI	CCWWGG	3 cut(s)	764, 825, 863
TaaI	ACNGT	3 cut(s)	517, 629, 1020
TaiI	ACGT	1 cut(s)	219
TaqI	TCGA	6 cut(s)	35, 270, 416, 747, 934, 1164
TaqII	GACCGA	1 cut(s)	107
TasI	AATT	9 cut(s)	98, 112, 245, 436, 481, 622, 1205, 1388, 1453
TatI	WGTACW	2 cut(s)	304, 1227
TfiI	GAWTC	5 cut(s)	229, 299, 405, 779, 834
Tru1I	TTAA	3 cut(s)	732, 951, 1011
Tru9I	TTAA	3 cut(s)	732, 951, 1011
TscAI	CASTG	1 cut(s)	1023
TseI	GCWGC	6 cut(s)	398, 842, 977, 1136, 1416, 1423
TspDTI	ATGAA	6 cut(s)	254, 538, 884, 1233, 1313, 1335
TspRI	CASTG	1 cut(s)	1023
Van91I	CCANNNNNTGG	1 cut(s)	448
Vha464I	CTTAAG	1 cut(s)	1010
XagI	CCTNNNNNAGG	1 cut(s)	92
XapI	RAATTY	2 cut(s)	481, 1388
XceI	RCATGY	1 cut(s)	1226
XcmI	CCANNNNNNNNNTGG	1 cut(s)	578
XmiI	GTMKAC	1 cut(s)	567
XmnI	GAANNNNTTC	1 cut(s)	1440
XspI	CTAG	2 cut(s)	356, 1086
Zsp2I	ATGCAT	2 cut(s)	462, 1197

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.