Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0026666

Physical Location & Seq

Genomic Coordinates Forward (+)

5614134 .. 5615919

Gene Structure 1786 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G08800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 858 bp

ATGGAACTTCGTATCGGGAATAAGTTCCGGCTTGGTCGGAAAATTGGTAGCGGCGCATTCGGAGAGATTTATCTTGGAACTGATGTTCAAAGTAACGAAGATGTTGCAATTAAGTTTGAAAGTGTGAAGACTGTGCATCCACAATTAGCATATGAGTCAAGGATATATAGAGTTCTTCAGAGTGGAAATGGTATTCCAAACATGAAATGGTATGGCAAATTTAGTTTGAAGACAGTTCTCATGCTAGCTGATCAAATGATTAATCGGCTCGAGTTTATCCATTCTAAGTCGTTTCTTCATCGCGATATAAAGCCGGATAATTTTCTTATGGGTAAGGCTGGCAAATCAGACTTTGGCTTGGCTAGGAAATATAGAGATAGCTCAAGCTACCGACATATTCCATATAGGGAGAATAAAAGTCTAACTGGGACTCCGGCGTATGCCAGCTTGAACACTCACCTAGGGATCGAGCAAAGTCGGAGGGATGATGTAGAATCACTTGGTTATATCCTCATGTACTTCCTCAAAGGAAGTCTCCCATGGAAGGGACTAAAAGCTGGGAATAAGAAACAGAAATATGACAAGATTAGCGAGAAGAAGGTTTCAACTTCCATCGAAACGTTATGTGAAGGTCATCCAATAGAGTTTGCAACCTACATCCATTACTGCCGCTCGCTTAGGTTCGATGATAAGCCAGACTATGCCTATTTGAAGAGACTGTTCCGCGACCTTTTTATTCGTGAAGGTTTTCAGTTTGATTTTGTGTTTGACTGGACGGTGTTAAAGCTGCCCGCAATCACAATGCCGAAACCCTCCACCTTGTGCAAATGCACACTCTTGATACTTTCAACTTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008360 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022603 GO:0022604 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0065007 GO:0065008 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04011 ko04392 map04011 map04392

Pfam Domains

Protein Families

Pkinase

Protein Analysis

285

Amino Acids

32.94

Weight (kDa)

9.54

Isoelectric Point (pI)

39.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	73 - 195	4.5e-16	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	73 - 236	1.5e-07	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0026666)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19470 AT4G08800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	672
AccII	CGCG	2 cut(s)	303, 726
AciI	CCGC	4 cut(s)	51, 670, 724, 792
AclI	AACGTT	1 cut(s)	620
AclWI	GGATC	1 cut(s)	473
AcsI	RAATTY	1 cut(s)	218
AcuI	CTGAAG	1 cut(s)	161
AdeI	CACNNNGTG	1 cut(s)	822
AfaI	GTAC	1 cut(s)	518
AfiI	CCNNNNNNNGG	2 cut(s)	544, 545
AgsI	TTSAA	7 cut(s)	89, 119, 229, 451, 606, 712, 849
AloI	GAACNNNNNNTCC	2 cut(s)	69, 101
AluBI	AGCT	6 cut(s)	248, 381, 387, 447, 557, 787
AluI	AGCT	6 cut(s)	248, 381, 387, 447, 557, 787
Alw26I	GTCTC	2 cut(s)	539, 709
AlwI	GGATC	1 cut(s)	473
Ama87I	CYCGRG	1 cut(s)	269
ApeKI	GCWGC	1 cut(s)	787
ApoI	RAATTY	1 cut(s)	218
AseI	ATTAAT	1 cut(s)	261
Asp700I	GAANNNNTTC	2 cut(s)	23, 747
AspA2I	CCTAGG	1 cut(s)	460
AspLEI	GCGC	1 cut(s)	56
AsuHPI	GGTGA	1 cut(s)	449
AsuNHI	GCTAGC	1 cut(s)	244
AvaI	CYCGRG	1 cut(s)	269
AvrII	CCTAGG	1 cut(s)	460
BbsI	GAAGAC	2 cut(s)	134, 236
BbvI	GCAGC	1 cut(s)	774
BccI	CCATC	1 cut(s)	620
BcgI	CGANNNNNNTGC	2 cut(s)	86, 120
BclI	TGATCA	1 cut(s)	250
BcoDI	GTCTC	2 cut(s)	539, 709
BfaI	CTAG	3 cut(s)	245, 363, 461
BisI	GCNGC	3 cut(s)	52, 670, 788
BlnI	CCTAGG	1 cut(s)	460
BlsI	GCNGC	3 cut(s)	53, 671, 789
BmeT110I	CYCGRG	1 cut(s)	269
BmrI	ACTGGG	1 cut(s)	435
BmsI	GCATC	1 cut(s)	145
BmtI	GCTAGC	1 cut(s)	248
BmuI	ACTGGG	1 cut(s)	435
BpiI	GAAGAC	2 cut(s)	134, 236
Bpu10I	CCTNAGC	1 cut(s)	677
BpuEI	CTTGAG	1 cut(s)	367
BsaJI	CCNNGG	2 cut(s)	460, 539
BsaXI	ACNNNNNCTCC	2 cut(s)	415, 445
Bsc4I	CCNNNNNNNGG	2 cut(s)	544, 545
Bse1I	ACTGG	2 cut(s)	430, 776
BseDI	CCNNGG	2 cut(s)	460, 539
BseGI	GGATG	4 cut(s)	136, 490, 634, 657
BseLI	CCNNNNNNNGG	2 cut(s)	544, 545
BseNI	ACTGG	2 cut(s)	430, 776
BseXI	GCAGC	1 cut(s)	774
BseYI	CCCAGC	1 cut(s)	557
Bsh1236I	CGCG	2 cut(s)	303, 726
BsiHKCI	CYCGRG	1 cut(s)	269
BsiSI	CCGG	3 cut(s)	28, 314, 434
BslFI	GGGAC	2 cut(s)	442, 561
BslI	CCNNNNNNNGG	2 cut(s)	544, 545
BsmAI	GTCTC	2 cut(s)	539, 709
BsmFI	GGGAC	2 cut(s)	442, 561
BsmI	GAATGC	1 cut(s)	56
BsoBI	CYCGRG	1 cut(s)	269
Bsp143I	GATC	2 cut(s)	250, 465
Bsp19I	CCATGG	1 cut(s)	539
Bsp68I	TCGCGA	1 cut(s)	303
BspACI	CCGC	4 cut(s)	51, 670, 724, 792
BspFNI	CGCG	2 cut(s)	303, 726
BspOI	GCTAGC	1 cut(s)	248
BspPI	GGATC	1 cut(s)	473
BsrBI	CCGCTC	1 cut(s)	672
BsrI	ACTGG	2 cut(s)	430, 776
BssECI	CCNNGG	2 cut(s)	460, 539
BssMI	GATC	2 cut(s)	250, 465
BssT1I	CCWWGG	2 cut(s)	460, 539
Bst4CI	ACNGT	4 cut(s)	133, 235, 720, 778
Bst6I	CTCTTC	1 cut(s)	707
BstC8I	GCNNGC	5 cut(s)	246, 340, 445, 674, 792
BstDEI	CTNAG	2 cut(s)	285, 677
BstDSI	CCRYGG	1 cut(s)	539
BstF5I	GGATG	4 cut(s)	136, 490, 634, 657
BstFNI	CGCG	2 cut(s)	303, 726
BstHHI	GCGC	1 cut(s)	56
BstKTI	GATC	2 cut(s)	253, 468
BstMAI	GTCTC	2 cut(s)	539, 709
BstMBI	GATC	2 cut(s)	250, 465
BstUI	CGCG	2 cut(s)	303, 726
BstV1I	GCAGC	1 cut(s)	774
BstV2I	GAAGAC	2 cut(s)	134, 236
BtgI	CCRYGG	1 cut(s)	539
BtgZI	GCGATG	1 cut(s)	284
BtsCI	GGATG	4 cut(s)	136, 490, 634, 657
BtuMI	TCGCGA	1 cut(s)	303
Cac8I	GCNNGC	5 cut(s)	246, 340, 445, 674, 792
CfoI	GCGC	1 cut(s)	56
Csp6I	GTAC	1 cut(s)	517
CviAII	CATG	4 cut(s)	202, 241, 514, 540
CviQI	GTAC	1 cut(s)	517
DdeI	CTNAG	2 cut(s)	285, 677
DpnI	GATC	2 cut(s)	252, 467
DpnII	GATC	2 cut(s)	250, 465
DraIII	CACNNNGTG	1 cut(s)	822
Eam1104I	CTCTTC	1 cut(s)	707
EarI	CTCTTC	1 cut(s)	707
Eco130I	CCWWGG	2 cut(s)	460, 539
Eco57I	CTGAAG	1 cut(s)	161
Eco88I	CYCGRG	1 cut(s)	269
EcoT14I	CCWWGG	2 cut(s)	460, 539
ErhI	CCWWGG	2 cut(s)	460, 539
FaeI	CATG	4 cut(s)	205, 244, 517, 543
FaqI	GGGAC	2 cut(s)	442, 561
FatI	CATG	4 cut(s)	201, 240, 513, 539
FauI	CCCGC	1 cut(s)	799
FauNDI	CATATG	1 cut(s)	151
FbaI	TGATCA	1 cut(s)	250
Fnu4HI	GCNGC	3 cut(s)	52, 670, 788
FokI	GGATG	4 cut(s)	123, 497, 621, 644
Fsp4HI	GCNGC	3 cut(s)	52, 670, 788
FspBI	CTAG	3 cut(s)	245, 363, 461
GlaI	GCGC	1 cut(s)	55
GluI	GCNGC	3 cut(s)	52, 670, 788
GsaI	CCCAGC	1 cut(s)	561
HapII	CCGG	3 cut(s)	28, 314, 434
HhaI	GCGC	1 cut(s)	56
Hin1II	CATG	4 cut(s)	205, 244, 517, 543
Hin6I	GCGC	1 cut(s)	54
HinP1I	GCGC	1 cut(s)	54
HinfI	GANTC	3 cut(s)	155, 430, 494
HpaII	CCGG	3 cut(s)	28, 314, 434
HphI	GGTGA	1 cut(s)	449
Hpy188I	TCNGA	5 cut(s)	39, 62, 180, 349, 480
Hpy188III	TCNNGA	4 cut(s)	16, 302, 740, 838
HpyAV	CCTTC	4 cut(s)	538, 592, 623, 737
HpyCH4III	ACNGT	4 cut(s)	133, 235, 720, 778
HpyCH4IV	ACGT	1 cut(s)	620
HpyCH4V	TGCA	5 cut(s)	107, 136, 650, 825, 831
HpyF3I	CTNAG	2 cut(s)	285, 677
HpySE526I	ACGT	1 cut(s)	620
Hsp92II	CATG	4 cut(s)	205, 244, 517, 543
HspAI	GCGC	1 cut(s)	54
Ksp22I	TGATCA	1 cut(s)	250
Kzo9I	GATC	2 cut(s)	250, 465
LpnPI	CCDG	9 cut(s)	41, 324, 327, 411, 447, 457, 543, 708, 757
Lsp1109I	GCAGC	1 cut(s)	774
LweI	GCATC	1 cut(s)	145
MaeI	CTAG	3 cut(s)	245, 363, 461
MaeII	ACGT	1 cut(s)	620
MaeIII	GTNAC	1 cut(s)	92
MalI	GATC	2 cut(s)	252, 467
MbiI	CCGCTC	1 cut(s)	672
MboI	GATC	2 cut(s)	250, 465
MboII	GAAGA	7 cut(s)	110, 139, 167, 241, 287, 607, 724
MluCI	AATT	5 cut(s)	42, 108, 143, 218, 319
MlyI	GAGTC	2 cut(s)	164, 424
MmeI	TCCRAC	2 cut(s)	17, 458
MnlI	CCTC	4 cut(s)	474, 521, 533, 823
MroXI	GAANNNNTTC	2 cut(s)	23, 747
MseI	TTAA	3 cut(s)	111, 261, 782
MspI	CCGG	3 cut(s)	28, 314, 434
Mva1269I	GAATGC	1 cut(s)	56
MvnI	CGCG	2 cut(s)	303, 726
NcoI	CCATGG	1 cut(s)	539
NdeI	CATATG	1 cut(s)	151
NdeII	GATC	2 cut(s)	250, 465
NheI	GCTAGC	1 cut(s)	244
NlaIII	CATG	4 cut(s)	205, 244, 517, 543
NruI	TCGCGA	1 cut(s)	303
PaeR7I	CTCGAG	1 cut(s)	269
PctI	GAATGC	1 cut(s)	56
PdmI	GAANNNNTTC	2 cut(s)	23, 747
PfeI	GAWTC	1 cut(s)	494
PkrI	GCNGC	3 cut(s)	53, 671, 789
PleI	GAGTC	2 cut(s)	163, 424
PpsI	GAGTC	2 cut(s)	163, 424
PshBI	ATTAAT	1 cut(s)	261
Psp1406I	AACGTT	1 cut(s)	620
PspFI	CCCAGC	1 cut(s)	557
PspXI	VCTCGAGB	1 cut(s)	269
RruI	TCGCGA	1 cut(s)	303
RsaI	GTAC	1 cut(s)	518
RsaNI	GTAC	1 cut(s)	517
SaqAI	TTAA	3 cut(s)	111, 261, 782
SatI	GCNGC	3 cut(s)	52, 670, 788
Sau3AI	GATC	2 cut(s)	250, 465
SchI	GAGTC	2 cut(s)	164, 424
SfaNI	GCATC	1 cut(s)	145
Sfr274I	CTCGAG	1 cut(s)	269
SlaI	CTCGAG	1 cut(s)	269
SmlI	CTYRAG	2 cut(s)	269, 382
SmoI	CTYRAG	2 cut(s)	269, 382
Sse9I	AATT	5 cut(s)	42, 108, 143, 218, 319
SsiI	CCGC	4 cut(s)	51, 670, 724, 792
SspMI	CTAG	3 cut(s)	245, 363, 461
StyI	CCWWGG	2 cut(s)	460, 539
TaaI	ACNGT	4 cut(s)	133, 235, 720, 778
TaiI	ACGT	1 cut(s)	623
TaqI	TCGA	4 cut(s)	270, 468, 615, 684
TasI	AATT	5 cut(s)	42, 108, 143, 218, 319
TatI	WGTACW	1 cut(s)	516
TauI	GCSGC	2 cut(s)	54, 672
TfiI	GAWTC	1 cut(s)	494
Tru1I	TTAA	3 cut(s)	111, 261, 782
Tru9I	TTAA	3 cut(s)	111, 261, 782
TseI	GCWGC	1 cut(s)	787
TspDTI	ATGAA	2 cut(s)	218, 287
VspI	ATTAAT	1 cut(s)	261
XapI	RAATTY	1 cut(s)	218
XcmI	CCANNNNNNNNNTGG	1 cut(s)	204
XhoI	CTCGAG	1 cut(s)	269
XmaJI	CCTAGG	1 cut(s)	460
XmnI	GAANNNNTTC	2 cut(s)	23, 747
XspI	CTAG	3 cut(s)	245, 363, 461

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.