T-complex protein 11
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Tcp11 | PF05794 | 609 - 1094 | 1.7e-77 | T-complex protein 11 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1684 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2391 |
| Acc16I | TGCGCA | 1 cut(s) | 516 |
| Acc36I | ACCTGC | 3 cut(s) | 1684, 2395, 2942 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2049, 2255 |
| AccBSI | CCGCTC | 2 cut(s) | 494, 739 |
| AccI | GTMKAC | 1 cut(s) | 2118 |
| AccII | CGCG | 1 cut(s) | 3113 |
| AclI | AACGTT | 1 cut(s) | 2473 |
| AclWI | GGATC | 5 cut(s) | 944, 1036, 2569, 2694, 2836 |
| AcoI | YGGCCR | 2 cut(s) | 2257, 3120 |
| AcsI | RAATTY | 5 cut(s) | 1159, 1221, 1415, 1726, 2266 |
| AcuI | CTGAAG | 3 cut(s) | 1889, 1969, 2426 |
| AfaI | GTAC | 1 cut(s) | 963 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 242, 1715, 1886, 2049, 2255, 2648, 2951 |
| AflII | CTTAAG | 2 cut(s) | 1094, 2378 |
| AflIII | ACRYGT | 1 cut(s) | 3076 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2446 |
| AhlI | ACTAGT | 1 cut(s) | 2857 |
| AjnI | CCWGG | 1 cut(s) | 2647 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1337, 1369 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2229, 2261 |
| Alw21I | GWGCWC | 2 cut(s) | 1457, 1660 |
| Alw26I | GTCTC | 9 cut(s) | 139, 262, 539, 1916, 2047, 2611, 2830, 3002, 3054 |
| AlwI | GGATC | 5 cut(s) | 944, 1036, 2569, 2694, 2836 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1001, 2101 |
| Ama87I | CYCGRG | 2 cut(s) | 660, 1378 |
| AoxI | GGCC | 5 cut(s) | 1758, 2257, 2569, 2704, 3120 |
| ApoI | RAATTY | 5 cut(s) | 1159, 1221, 1415, 1726, 2266 |
| AseI | ATTAAT | 2 cut(s) | 1083, 1488 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2763 |
| AspLEI | GCGC | 3 cut(s) | 517, 769, 1297 |
| AspS9I | GGNCC | 3 cut(s) | 724, 1361, 2384 |
| AsuC2I | CCSGG | 4 cut(s) | 1257, 1379, 1380, 1716 |
| AsuII | TTCGAA | 2 cut(s) | 1117, 2264 |
| AvaI | CYCGRG | 2 cut(s) | 660, 1378 |
| AvaII | GGWCC | 3 cut(s) | 724, 1361, 2384 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 2070, 2103, 3063, 3096 |
| BalI | TGGCCA | 1 cut(s) | 2259 |
| BanII | GRGCYC | 1 cut(s) | 1721 |
| BauI | CACGAG | 1 cut(s) | 1659 |
| BbsI | GAAGAC | 3 cut(s) | 104, 1607, 2442 |
| Bbv12I | GWGCWC | 2 cut(s) | 1457, 1660 |
| BccI | CCATC | 8 cut(s) | 340, 607, 1171, 1646, 1702, 1940, 2249, 2837 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2569, 2603 |
| BciT130I | CCWGG | 1 cut(s) | 2649 |
| BciVI | GTATCC | 1 cut(s) | 1885 |
| BclI | TGATCA | 1 cut(s) | 1242 |
| BcnI | CCSGG | 4 cut(s) | 1257, 1379, 1380, 1716 |
| BcoDI | GTCTC | 9 cut(s) | 139, 262, 539, 1916, 2047, 2611, 2830, 3002, 3054 |
| BcuI | ACTAGT | 1 cut(s) | 2857 |
| BfmI | CTRYAG | 2 cut(s) | 597, 1677 |
| BfrI | CTTAAG | 2 cut(s) | 1094, 2378 |
| BfuAI | ACCTGC | 3 cut(s) | 1684, 2395, 2942 |
| BfuI | GTATCC | 1 cut(s) | 1885 |
| BglII | AGATCT | 1 cut(s) | 1421 |
| BlpI | GCTNAGC | 1 cut(s) | 1497 |
| Bme1390I | CCNGG | 5 cut(s) | 1257, 1379, 1380, 1716, 2649 |
| Bme18I | GGWCC | 3 cut(s) | 724, 1361, 2384 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2446 |
| BmeT110I | CYCGRG | 2 cut(s) | 660, 1378 |
| BmgT120I | GGNCC | 3 cut(s) | 724, 1361, 2384 |
| BmiI | GGNNCC | 5 cut(s) | 9, 101, 2370, 2385, 2434 |
| BmrFI | CCNGG | 5 cut(s) | 1257, 1379, 1380, 1716, 2649 |
| BmrI | ACTGGG | 2 cut(s) | 1128, 1896 |
| BmuI | ACTGGG | 2 cut(s) | 1128, 1896 |
| BpiI | GAAGAC | 3 cut(s) | 104, 1607, 2442 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 643, 675 |
| BpmI | CTGGAG | 4 cut(s) | 892, 2071, 2166, 2831 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1497 |
| Bpu14I | TTCGAA | 2 cut(s) | 1117, 2264 |
| BpuEI | CTTGAG | 4 cut(s) | 401, 1484, 1512, 2165 |
| BpuMI | CCSGG | 4 cut(s) | 1257, 1379, 1380, 1716 |
| Bsa29I | ATCGAT | 2 cut(s) | 150, 2076 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1686 |
| BsaJI | CCNNGG | 4 cut(s) | 92, 1378, 2155, 3111 |
| BsaWI | WCCGGW | 1 cut(s) | 43 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 242, 1715, 1886, 2049, 2255, 2648, 2951 |
| Bse1I | ACTGG | 6 cut(s) | 1134, 1891, 2054, 2106, 2421, 2599 |
| Bse3DI | GCAATG | 3 cut(s) | 1022, 1390, 2608 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1686 |
| BseBI | CCWGG | 1 cut(s) | 2649 |
| BseCI | ATCGAT | 2 cut(s) | 150, 2076 |
| BseDI | CCNNGG | 4 cut(s) | 92, 1378, 2155, 3111 |
| BseJI | GATNNNNATC | 1 cut(s) | 1686 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 242, 1715, 1886, 2049, 2255, 2648, 2951 |
| BseMI | GCAATG | 3 cut(s) | 1022, 1390, 2608 |
| BseMII | CTCAG | 9 cut(s) | 26, 175, 438, 696, 1008, 1439, 1527, 1536, 2777 |
| BseNI | ACTGG | 6 cut(s) | 1134, 1891, 2054, 2106, 2421, 2599 |
| BseRI | GAGGAG | 4 cut(s) | 269, 889, 2508, 2599 |
| BseYI | CCCAGC | 1 cut(s) | 1989 |
| Bsh1236I | CGCG | 1 cut(s) | 3113 |
| BshFI | GGCC | 5 cut(s) | 1760, 2259, 2571, 2706, 3122 |
| BshVI | ATCGAT | 2 cut(s) | 150, 2076 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1457, 1660 |
| BsiHKCI | CYCGRG | 2 cut(s) | 660, 1378 |
| BsiSI | CCGG | 5 cut(s) | 44, 1257, 1379, 1715, 3123 |
| BslFI | GGGAC | 3 cut(s) | 1122, 2397, 2738 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 242, 1715, 1886, 2049, 2255, 2648, 2951 |
| BsmAI | GTCTC | 9 cut(s) | 139, 262, 539, 1916, 2047, 2611, 2830, 3002, 3054 |
| BsmBI | CGTCTC | 2 cut(s) | 539, 3054 |
| BsmFI | GGGAC | 3 cut(s) | 1122, 2397, 2738 |
| BsmI | GAATGC | 1 cut(s) | 652 |
| BsnI | GGCC | 5 cut(s) | 1760, 2259, 2571, 2706, 3122 |
| BsoBI | CYCGRG | 2 cut(s) | 660, 1378 |
| Bsp119I | TTCGAA | 2 cut(s) | 1117, 2264 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1457, 1660, 1721 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1497 |
| BspANI | GGCC | 5 cut(s) | 1760, 2259, 2571, 2706, 3122 |
| BspCNI | CTCAG | 9 cut(s) | 27, 174, 439, 697, 1007, 1438, 1528, 1537, 2778 |
| BspDI | ATCGAT | 2 cut(s) | 150, 2076 |
| BspFNI | CGCG | 1 cut(s) | 3113 |
| BspHI | TCATGA | 2 cut(s) | 925, 2004 |
| BspLI | GGNNCC | 5 cut(s) | 9, 101, 2370, 2385, 2434 |
| BspMAI | CTGCAG | 2 cut(s) | 601, 1681 |
| BspMI | ACCTGC | 3 cut(s) | 1684, 2395, 2942 |
| BspPI | GGATC | 5 cut(s) | 944, 1036, 2569, 2694, 2836 |
| BspQI | GCTCTTC | 3 cut(s) | 484, 634, 729 |
| BspT104I | TTCGAA | 2 cut(s) | 1117, 2264 |
| BspTI | CTTAAG | 2 cut(s) | 1094, 2378 |
| BsrBI | CCGCTC | 2 cut(s) | 494, 739 |
| BsrDI | GCAATG | 3 cut(s) | 1022, 1390, 2608 |
| BsrI | ACTGG | 6 cut(s) | 1134, 1891, 2054, 2106, 2421, 2599 |
| BssECI | CCNNGG | 4 cut(s) | 92, 1378, 2155, 3111 |
| BssSI | CACGAG | 1 cut(s) | 1659 |
| BssT1I | CCWWGG | 1 cut(s) | 2155 |
| Bst2BI | CACGAG | 1 cut(s) | 1659 |
| Bst2UI | CCWGG | 1 cut(s) | 2649 |
| BstAFI | CTTAAG | 2 cut(s) | 1094, 2378 |
| BstBI | TTCGAA | 2 cut(s) | 1117, 2264 |
| BstC8I | GCNNGC | 4 cut(s) | 330, 510, 570, 1154 |
| BstDSI | CCRYGG | 2 cut(s) | 92, 3111 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2949 |
| BstFNI | CGCG | 1 cut(s) | 3113 |
| BstHHI | GCGC | 3 cut(s) | 517, 769, 1297 |
| BstMAI | GTCTC | 9 cut(s) | 139, 262, 539, 1916, 2047, 2611, 2830, 3002, 3054 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 338, 362, 514, 766, 1805, 2537, 3062, 3107, 3119 |
| BstNI | CCWGG | 1 cut(s) | 2649 |
| BstNSI | RCATGY | 2 cut(s) | 3037, 3080 |
| BstSCI | CCNGG | 5 cut(s) | 1255, 1377, 1378, 1714, 2647 |
| BstSFI | CTRYAG | 2 cut(s) | 597, 1677 |
| BstUI | CGCG | 1 cut(s) | 3113 |
| BstV2I | GAAGAC | 3 cut(s) | 104, 1607, 2442 |
| BstX2I | RGATCY | 3 cut(s) | 1041, 1421, 2686 |
| BstYI | RGATCY | 3 cut(s) | 1041, 1421, 2686 |
| Bsu15I | ATCGAT | 2 cut(s) | 150, 2076 |
| BsuI | GTATCC | 1 cut(s) | 1885 |
| BsuRI | GGCC | 5 cut(s) | 1760, 2259, 2571, 2706, 3122 |
| BsuTUI | ATCGAT | 2 cut(s) | 150, 2076 |
| BtgI | CCRYGG | 2 cut(s) | 92, 3111 |
| BtsI | GCAGTG | 1 cut(s) | 3072 |
| BtsIMutI | CAGTG | 5 cut(s) | 1591, 1884, 2839, 3072, 3243 |
| BveI | ACCTGC | 3 cut(s) | 1684, 2395, 2942 |
| Cac8I | GCNNGC | 4 cut(s) | 330, 510, 570, 1154 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1001, 2101 |
| CciI | TCATGA | 2 cut(s) | 925, 2004 |
| CfoI | GCGC | 3 cut(s) | 517, 769, 1297 |
| Cfr13I | GGNCC | 3 cut(s) | 724, 1361, 2384 |
| Cfr42I | CCGCGG | 1 cut(s) | 3114 |
| Cfr9I | CCCGGG | 1 cut(s) | 1378 |
| ClaI | ATCGAT | 2 cut(s) | 150, 2076 |
| CseI | GACGC | 3 cut(s) | 2436, 2945, 3071 |
| Csp6I | GTAC | 1 cut(s) | 962 |
| CviQI | GTAC | 1 cut(s) | 962 |
| DraI | TTTAAA | 1 cut(s) | 472 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2391 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2446 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2391 |
| EaeI | YGGCCR | 2 cut(s) | 2257, 3120 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2446 |
| EciI | GGCGGA | 2 cut(s) | 127, 1098 |
| Eco130I | CCWWGG | 1 cut(s) | 2155 |
| Eco147I | AGGCCT | 1 cut(s) | 2571 |
| Eco24I | GRGCYC | 1 cut(s) | 1721 |
| Eco32I | GATATC | 3 cut(s) | 1184, 1211, 2037 |
| Eco47I | GGWCC | 3 cut(s) | 724, 1361, 2384 |
| Eco57I | CTGAAG | 3 cut(s) | 1889, 1969, 2426 |
| Eco88I | CYCGRG | 2 cut(s) | 660, 1378 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2949 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2384 |
| EcoRI | GAATTC | 1 cut(s) | 2266 |
| EcoRII | CCWGG | 1 cut(s) | 2647 |
| EcoRV | GATATC | 3 cut(s) | 1184, 1211, 2037 |
| EcoT14I | CCWWGG | 1 cut(s) | 2155 |
| EcoT38I | GRGCYC | 1 cut(s) | 1721 |
| ErhI | CCWWGG | 1 cut(s) | 2155 |
| Esp3I | CGTCTC | 2 cut(s) | 539, 3054 |
| FaqI | GGGAC | 3 cut(s) | 1122, 2397, 2738 |
| FauNDI | CATATG | 1 cut(s) | 2275 |
| FbaI | TGATCA | 1 cut(s) | 1242 |
| FblI | GTMKAC | 1 cut(s) | 2118 |
| FriOI | GRGCYC | 1 cut(s) | 1721 |
| FspI | TGCGCA | 1 cut(s) | 516 |
| GlaI | GCGC | 3 cut(s) | 516, 768, 1296 |
| GsaI | CCCAGC | 1 cut(s) | 1993 |
| GsuI | CTGGAG | 4 cut(s) | 892, 2071, 2166, 2831 |
| HaeIII | GGCC | 5 cut(s) | 1760, 2259, 2571, 2706, 3122 |
| HapII | CCGG | 5 cut(s) | 44, 1257, 1379, 1715, 3123 |
| HgaI | GACGC | 3 cut(s) | 2436, 2945, 3071 |
| HhaI | GCGC | 3 cut(s) | 517, 769, 1297 |
| Hin6I | GCGC | 3 cut(s) | 515, 767, 1295 |
| HinP1I | GCGC | 3 cut(s) | 515, 767, 1295 |
| HincII | GTYRAC | 1 cut(s) | 2119 |
| HindII | GTYRAC | 1 cut(s) | 2119 |
| HindIII | AAGCTT | 4 cut(s) | 281, 1446, 1499, 3046 |
| HpaII | CCGG | 5 cut(s) | 44, 1257, 1379, 1715, 3123 |
| Hpy166II | GTNNAC | 3 cut(s) | 1283, 2119, 3072 |
| Hpy8I | GTNNAC | 3 cut(s) | 1283, 2119, 3072 |
| Hpy99I | CGWCG | 3 cut(s) | 108, 111, 183 |
| HpyCH4IV | ACGT | 4 cut(s) | 1405, 1776, 2473, 3244 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 338, 362, 514, 766, 1805, 2537, 3062, 3107, 3119 |
| HpySE526I | ACGT | 4 cut(s) | 1405, 1776, 2473, 3244 |
| HspAI | GCGC | 3 cut(s) | 515, 767, 1295 |
| Ksp22I | TGATCA | 1 cut(s) | 1242 |
| KspI | CCGCGG | 1 cut(s) | 3114 |
| LguI | GCTCTTC | 3 cut(s) | 484, 634, 729 |
| LmnI | GCTCC | 8 cut(s) | 105, 256, 325, 1655, 1752, 2185, 2368, 3176 |
| MaeII | ACGT | 4 cut(s) | 1405, 1776, 2473, 3244 |
| MaeIII | GTNAC | 6 cut(s) | 64, 1731, 2091, 2097, 2206, 3240 |
| MbiI | CCGCTC | 2 cut(s) | 494, 739 |
| MflI | RGATCY | 3 cut(s) | 1041, 1421, 2686 |
| MhlI | GDGCHC | 3 cut(s) | 1457, 1660, 1721 |
| MlsI | TGGCCA | 1 cut(s) | 2259 |
| MluNI | TGGCCA | 1 cut(s) | 2259 |
| MlyI | GAGTC | 7 cut(s) | 79, 136, 652, 700, 965, 1041, 1541 |
| MmeI | TCCRAC | 3 cut(s) | 1069, 1646, 2273 |
| Mox20I | TGGCCA | 1 cut(s) | 2259 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2763 |
| MscI | TGGCCA | 1 cut(s) | 2259 |
| MslI | CAYNNNNRTG | 4 cut(s) | 986, 1257, 2526, 3038 |
| Msp20I | TGGCCA | 1 cut(s) | 2259 |
| MspA1I | CMGCKG | 3 cut(s) | 596, 1989, 3113 |
| MspCI | CTTAAG | 2 cut(s) | 1094, 2378 |
| MspI | CCGG | 5 cut(s) | 44, 1257, 1379, 1715, 3123 |
| MspR9I | CCNGG | 5 cut(s) | 1257, 1379, 1380, 1716, 2649 |
| Mva1269I | GAATGC | 1 cut(s) | 652 |
| MvaI | CCWGG | 1 cut(s) | 2649 |
| MvnI | CGCG | 1 cut(s) | 3113 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 338, 362, 514, 766, 1805, 2537, 3062, 3107, 3119 |
| NciI | CCSGG | 4 cut(s) | 1257, 1379, 1380, 1716 |
| NdeI | CATATG | 1 cut(s) | 2275 |
| NlaIV | GGNNCC | 5 cut(s) | 9, 101, 2370, 2385, 2434 |
| NmuCI | GTSAC | 3 cut(s) | 1731, 2091, 3240 |
| NsbI | TGCGCA | 1 cut(s) | 516 |
| NspI | RCATGY | 2 cut(s) | 3037, 3080 |
| NspV | TTCGAA | 2 cut(s) | 1117, 2264 |
| PagI | TCATGA | 2 cut(s) | 925, 2004 |
| PaqCI | CACCTGC | 1 cut(s) | 1684 |
| PceI | AGGCCT | 1 cut(s) | 2571 |
| PciI | ACATGT | 1 cut(s) | 3076 |
| PciSI | GCTCTTC | 3 cut(s) | 484, 634, 729 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 100 |
| PctI | GAATGC | 1 cut(s) | 652 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2763 |
| PflFI | GACNNNGTC | 1 cut(s) | 3197 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2049, 2255 |
| PfoI | TCCNGGA | 1 cut(s) | 2647 |
| PleI | GAGTC | 7 cut(s) | 79, 135, 652, 699, 964, 1041, 1540 |
| PpsI | GAGTC | 7 cut(s) | 79, 135, 652, 699, 964, 1041, 1540 |
| PpuMI | RGGWCCY | 1 cut(s) | 2384 |
| PscI | ACATGT | 1 cut(s) | 3076 |
| PshBI | ATTAAT | 2 cut(s) | 1083, 1488 |
| Psp1406I | AACGTT | 1 cut(s) | 2473 |
| Psp5II | RGGWCCY | 1 cut(s) | 2384 |
| Psp6I | CCWGG | 1 cut(s) | 2647 |
| PspFI | CCCAGC | 1 cut(s) | 1989 |
| PspGI | CCWGG | 1 cut(s) | 2647 |
| PspN4I | GGNNCC | 5 cut(s) | 9, 101, 2370, 2385, 2434 |
| PspPI | GGNCC | 3 cut(s) | 724, 1361, 2384 |
| PspPPI | RGGWCCY | 1 cut(s) | 2384 |
| PstI | CTGCAG | 2 cut(s) | 601, 1681 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1001, 2101 |
| PsuI | RGATCY | 3 cut(s) | 1041, 1421, 2686 |
| PsyI | GACNNNGTC | 1 cut(s) | 3197 |
| PvuII | CAGCTG | 2 cut(s) | 596, 1989 |
| RsaI | GTAC | 1 cut(s) | 963 |
| RsaNI | GTAC | 1 cut(s) | 962 |
| RseI | CAYNNNNRTG | 4 cut(s) | 986, 1257, 2526, 3038 |
| SacII | CCGCGG | 1 cut(s) | 3114 |
| SalI | GTCGAC | 1 cut(s) | 2117 |
| SapI | GCTCTTC | 3 cut(s) | 484, 634, 729 |
| Sau96I | GGNCC | 3 cut(s) | 724, 1361, 2384 |
| SchI | GAGTC | 7 cut(s) | 79, 136, 652, 700, 965, 1041, 1541 |
| ScrFI | CCNGG | 5 cut(s) | 1257, 1379, 1380, 1716, 2649 |
| SduI | GDGCHC | 3 cut(s) | 1457, 1660, 1721 |
| SfcI | CTRYAG | 2 cut(s) | 597, 1677 |
| Sfr303I | CCGCGG | 1 cut(s) | 3114 |
| SfuI | TTCGAA | 2 cut(s) | 1117, 2264 |
| SgrBI | CCGCGG | 1 cut(s) | 3114 |
| SinI | GGWCC | 3 cut(s) | 724, 1361, 2384 |
| SmaI | CCCGGG | 1 cut(s) | 1380 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 986, 1257, 2526, 3038 |
| SmlI | CTYRAG | 6 cut(s) | 380, 1094, 1463, 1527, 2144, 2378 |
| SmoI | CTYRAG | 6 cut(s) | 380, 1094, 1463, 1527, 2144, 2378 |
| SpeI | ACTAGT | 1 cut(s) | 2857 |
| SseBI | AGGCCT | 1 cut(s) | 2571 |
| SspI | AATATT | 2 cut(s) | 191, 2140 |
| StuI | AGGCCT | 1 cut(s) | 2571 |
| StyD4I | CCNGG | 5 cut(s) | 1255, 1377, 1378, 1714, 2647 |
| StyI | CCWWGG | 1 cut(s) | 2155 |
| TaiI | ACGT | 4 cut(s) | 1408, 1779, 2476, 3247 |
| TauI | GCSGC | 4 cut(s) | 143, 497, 742, 3113 |
| TscAI | CASTG | 5 cut(s) | 1591, 1891, 2839, 3072, 3243 |
| TseFI | GTSAC | 3 cut(s) | 1731, 2091, 3240 |
| Tsp45I | GTSAC | 3 cut(s) | 1731, 2091, 3240 |
| TspGWI | ACGGA | 6 cut(s) | 20, 92, 109, 167, 2096, 2917 |
| TspMI | CCCGGG | 1 cut(s) | 1378 |
| TspRI | CASTG | 5 cut(s) | 1591, 1891, 2839, 3072, 3243 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3197 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2049, 2255 |
| Vha464I | CTTAAG | 2 cut(s) | 1094, 2378 |
| VpaK11BI | GGWCC | 3 cut(s) | 724, 1361, 2384 |
| VspI | ATTAAT | 2 cut(s) | 1083, 1488 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2949 |
| XapI | RAATTY | 5 cut(s) | 1159, 1221, 1415, 1726, 2266 |
| XbaI | TCTAGA | 1 cut(s) | 1504 |
| XceI | RCATGY | 2 cut(s) | 3037, 3080 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1174, 1986 |
| XmaI | CCCGGG | 1 cut(s) | 1378 |
| XmiI | GTMKAC | 1 cut(s) | 2118 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2763 |