AT4G11480

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
6971401 .. 6973962
2562 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G11480.3

Sequence Viewer

Length: 1971 bp
ATGTGTCTGCAAAATCTCTTGTCAATCCTCTGTTTTGTCCTCGCCATTAGCTTCGGCTACGTGTCTGCACAAAAATGCGTGGATTCAATGTTTTTCAGACCCAACGGTACTTATGACACAAACCGTCATCTCATTCTCTCAAACCTTGCTTCCAACGTGAGTTCTCGAGACGGCTACTACAACGGTTCTGTCGGTGAAGGCCCTGATAGAATCTATGCGTTAGGTCTCTGTATCCCAGGGACTGATCCAAAGGTCTGTGATGATTGTATGCAAATCGCATCTACGGGTATATTACAAAACTGCCCGAACCAGACCGACTCATACGACTGGAGATCCCAGAAAACACTCTGTTTCGTTCGTTACTCCAACAGCTCGTTTTTCAACAAAATGGATCTAGAGCCGACAATGGTTATAGGAGATCTAAATAGTGGACTATTCCAAGGGGACCTTGCAGCTTATACAAGAACATGGGAGGAGTTCATGAACTCTATGATCACCAGAGTCGGTCGAACTCGTTACCTGGCCGATATATCCCCTCGGATAGGTTCTGCTCGTATATATGCGCTGATGCAATGTATTCGAGGGATATCCTCTATGGAATGTGAAACTTGTATTCGAGATAATGTGCGTATGTACCAGAGTTGCTGCAATGGGTTCATAGGAGGAACTATTCGCAAGCCGGTCTGCTTTTTCAGGTGGGATGGTTCTGAATATCTTGGTGCCTTTGGTGACACGCCATCGCTACCTCCACCATCTCCAGATGGGAAAACAATATCTACGGGAGCTATTGTTGCAGTTGTTGTCTCCGTGGTTATATTTGTAGTGCTGCTCGCTTTAGTATTGGTCATACGGAAGAGAAGACAATCGTACAAAACACTAAAACCTAAAACTGATGATGACATGACAAGTCCACAGTCTCTGCAATTTGATTTTATGACCCTCGAAGCGGCAACTGATAAATTTTCGAGGAATAACAAGCTAGGTAAAGGTGGGTTTGGTGAAGTTTACAAGGGAATGTTACCAAACGAAACAGAAGTTGCGGTGAAGCGGCTATCGAGTAATTCAGGACAAGGCACACAAGAGTTCAAGAACGAGGTTGTAATTGTGGCTAAGCTTCAACATAAGAATCTTGTTAGGCTTCTTGGGTTTTGCTTAGAAAGAGATGAACAGATACTTGTCTACGAGTTTGTTCCCAACAAGAGCCTTAATTATTTCCTCTTTGGTAATAAACAAAAACACTTACTTGATCCAACCAAGAAGAGTCAGCTAGATTGGAAAAGACGGTACAACATCATAGGAGGGATTACGCGAGGGCTTCTCTATCTTCATCAAGACTCGCGGCTAACCATCATACACCGTGACATCAAAGCAAGTAACATTCTTTTAGATGCTGATATGAACCCTAAAATAGCGGATTTTGGAATGGCAAGGAATTTTAGAGTGGACCAAACTGAAGACAATACAAGAAGAGTTGTTGGAACTTTCGGTTACATGCCTCCAGAGTATGTGACGCATGGCCAGTTCTCTACCAAATCTGATGTTTATAGCTTTGGAGTATTGATTCTGGAGATTGTTTGTGGCAAGAAGAACAGCAGCTTCTATAAGATAGATGATTCTGGTGGCAATTTGGTGACACATGTTTGGCGGCTTTGGAACAATGACTCACCTTTAGATCTCATCGACCCTGCGATTGAGGAAAGCTGCGATAATGATAAAGTCATAAGATGTATCCATATCGGACTTTTATGTGTTCAAGAAACTCCTGTAGATCGGCCAGAGATGTCTACAATATTTCAAATGCTTACTAATAGCTCCATTACTCTGCCTGTGCCTCGACCACCTGGATTTTTCTTCAGGAACAGATCCAATTTAGACCCTTTAACTTATGGATCCGAGCTGGGGCAATCGAGCAGCAAATCTATTCCTTATACTATAGATAGTGCGTCAATCACTAGAGTCACTCCTCGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

656

Amino Acids

73.69

Weight (kDa)

8.39

Isoelectric Point (pI)

45.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 26 - 123 2.3e-19 Salt stress response/antifungal
Stress-antifung PF01657 152 - 234 1.7e-07 Salt stress response/antifungal
Pkinase PF00069 325 - 526 3.1e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 327 - 595 3.3e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0020226)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G11470 AT4G11470 AT4G11480 AT4G11480 AT4G11480 AT4G11480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 719
AccI GTMKAC 2 cut(s) 1179, 1784
AccII CGCG 2 cut(s) 1309, 1339
AciI CCGC 6 cut(s) 947, 1040, 1048, 1339, 1412, 1645
AclWI GGATC 7 cut(s) 239, 327, 399, 1241, 1857, 1884, 1897
AcoI YGGCCR 3 cut(s) 522, 1516, 1772
AcsI RAATTY 2 cut(s) 959, 1432
AcuI CTGAAG 2 cut(s) 1473, 1837
AfaI GTAC 4 cut(s) 109, 635, 869, 1286
AfiI CCNNNNNNNGG 3 cut(s) 542, 946, 1899
AflIII ACRYGT 2 cut(s) 60, 1636
AgsI TTSAA 6 cut(s) 87, 382, 1087, 1118, 1754, 1796
AjnI CCWGG 3 cut(s) 235, 519, 1840
Alw26I GTCTC 4 cut(s) 162, 230, 808, 921
AlwI GGATC 7 cut(s) 239, 327, 399, 1241, 1857, 1884, 1897
AlwNI CAGNNNCTG 2 cut(s) 242, 919
Ama87I CYCGRG 1 cut(s) 165
AoxI GGCC 4 cut(s) 199, 522, 1516, 1772
ApeKI GCWGC 6 cut(s) 452, 645, 826, 1593, 1701, 1911
ApoI RAATTY 2 cut(s) 959, 1432
AspLEI GCGC 1 cut(s) 565
AspS9I GGNCC 3 cut(s) 200, 445, 1444
AsuHPI GGTGA 7 cut(s) 206, 487, 740, 1010, 1054, 1642, 1656
AvaI CYCGRG 1 cut(s) 165
AvaII GGWCC 2 cut(s) 445, 1444
BalI TGGCCA 1 cut(s) 1518
BamHI GGATCC 1 cut(s) 1889
BanI GGYRCC 1 cut(s) 719
BbsI GAAGAC 2 cut(s) 865, 1461
BbvI GCAGC 6 cut(s) 464, 632, 813, 1605, 1688, 1923
BccI CCATC 5 cut(s) 695, 745, 755, 760, 1355
BceAI ACGGC 1 cut(s) 187
BcgI CGANNNNNNTGC 2 cut(s) 560, 594
BciT130I CCWGG 3 cut(s) 237, 521, 1842
BciVI GTATCC 2 cut(s) 242, 1739
BclI TGATCA 1 cut(s) 492
BcoDI GTCTC 4 cut(s) 162, 230, 808, 921
BfaI CTAG 4 cut(s) 395, 980, 1268, 1953
BfmI CTRYAG 2 cut(s) 1764, 1932
BfuI GTATCC 2 cut(s) 242, 1739
BglII AGATCT 2 cut(s) 418, 1672
BlpI GCTNAGC 1 cut(s) 1110
Bme1390I CCNGG 3 cut(s) 237, 521, 1842
Bme18I GGWCC 2 cut(s) 445, 1444
BmeT110I CYCGRG 1 cut(s) 165
BmgT120I GGNCC 3 cut(s) 200, 445, 1444
BmiI GGNNCC 3 cut(s) 446, 721, 1891
BmrFI CCNGG 3 cut(s) 237, 521, 1842
BmsI GCATC 3 cut(s) 287, 558, 1378
BpiI GAAGAC 2 cut(s) 865, 1461
BplI GAGNNNNNCTC 2 cut(s) 1302, 1334
BpmI CTGGAG 4 cut(s) 349, 741, 1482, 1586
Bpu1102I GCTNAGC 1 cut(s) 1110
BsaAI YACGTR 1 cut(s) 61
BsaI GGTCTC 1 cut(s) 230
BsaJI CCNNGG 6 cut(s) 235, 236, 439, 536, 807, 1964
BsaXI ACNNNNNCTCC 2 cut(s) 774, 804
Bsc4I CCNNNNNNNGG 3 cut(s) 542, 946, 1899
Bse118I RCCGGY 1 cut(s) 679
Bse1I ACTGG 2 cut(s) 332, 1519
Bse3DI GCAATG 2 cut(s) 578, 655
BseBI CCWGG 3 cut(s) 237, 521, 1842
BseDI CCNNGG 6 cut(s) 235, 236, 439, 536, 807, 1964
BseGI GGATG 1 cut(s) 706
BseLI CCNNNNNNNGG 3 cut(s) 542, 946, 1899
BseMI GCAATG 2 cut(s) 578, 655
BseNI ACTGG 2 cut(s) 332, 1519
BseRI GAGGAG 2 cut(s) 488, 1953
BseXI GCAGC 6 cut(s) 464, 632, 813, 1605, 1688, 1923
BseYI CCCAGC 1 cut(s) 1897
BsgI GTGCAG 1 cut(s) 51
Bsh1236I CGCG 2 cut(s) 1309, 1339
Bsh1285I CGRYCG 1 cut(s) 508
BshFI GGCC 4 cut(s) 201, 524, 1518, 1774
BshNI GGYRCC 1 cut(s) 719
BsiEI CGRYCG 1 cut(s) 508
BsiHKCI CYCGRG 1 cut(s) 165
BsiSI CCGG 1 cut(s) 680
BslFI GGGAC 2 cut(s) 253, 458
BslI CCNNNNNNNGG 3 cut(s) 542, 946, 1899
BsmAI GTCTC 4 cut(s) 162, 230, 808, 921
BsmBI CGTCTC 1 cut(s) 162
BsmFI GGGAC 2 cut(s) 253, 458
BsnI GGCC 4 cut(s) 201, 524, 1518, 1774
Bso31I GGTCTC 1 cut(s) 230
BsoBI CYCGRG 1 cut(s) 165
Bsp1720I GCTNAGC 1 cut(s) 1110
BspACI CCGC 6 cut(s) 947, 1040, 1048, 1339, 1412, 1645
BspANI GGCC 4 cut(s) 201, 524, 1518, 1774
BspFNI CGCG 2 cut(s) 1309, 1339
BspHI TCATGA 1 cut(s) 480
BspLI GGNNCC 3 cut(s) 446, 721, 1891
BspPI GGATC 7 cut(s) 239, 327, 399, 1241, 1857, 1884, 1897
BspT107I GGYRCC 1 cut(s) 719
BspTNI GGTCTC 1 cut(s) 230
BsrDI GCAATG 2 cut(s) 578, 655
BsrFI RCCGGY 1 cut(s) 679
BsrI ACTGG 2 cut(s) 332, 1519
BssAI RCCGGY 1 cut(s) 679
BssECI CCNNGG 6 cut(s) 235, 236, 439, 536, 807, 1964
BssT1I CCWWGG 1 cut(s) 439
Bst2UI CCWGG 3 cut(s) 237, 521, 1842
Bst4CI ACNGT 6 cut(s) 107, 125, 185, 915, 1284, 1358
Bst6I CTCTTC 3 cut(s) 848, 1253, 1462
BstBAI YACGTR 1 cut(s) 61
BstC8I GCNNGC 2 cut(s) 677, 831
BstDEI CTNAG 2 cut(s) 1110, 1153
BstDSI CCRYGG 1 cut(s) 807
BstENI CCTNNNNNAGG 1 cut(s) 540
BstF5I GGATG 1 cut(s) 706
BstFNI CGCG 2 cut(s) 1309, 1339
BstHHI GCGC 1 cut(s) 565
BstMAI GTCTC 4 cut(s) 162, 230, 808, 921
BstMCI CGRYCG 1 cut(s) 508
BstMWI GCNNNNNNNGC 1 cut(s) 791
BstNI CCWGG 3 cut(s) 237, 521, 1842
BstNSI RCATGY 2 cut(s) 1495, 1640
BstSCI CCNGG 3 cut(s) 235, 519, 1840
BstSFI CTRYAG 2 cut(s) 1764, 1932
BstUI CGCG 2 cut(s) 1309, 1339
BstV1I GCAGC 6 cut(s) 464, 632, 813, 1605, 1688, 1923
BstV2I GAAGAC 2 cut(s) 865, 1461
BstX2I RGATCY 6 cut(s) 332, 391, 418, 1672, 1862, 1889
BstYI RGATCY 6 cut(s) 332, 391, 418, 1672, 1862, 1889
BsuI GTATCC 2 cut(s) 242, 1739
BsuRI GGCC 4 cut(s) 201, 524, 1518, 1774
BtgI CCRYGG 1 cut(s) 807
BtgZI GCGATG 1 cut(s) 723
BtsCI GGATG 1 cut(s) 706
Cac8I GCNNGC 2 cut(s) 677, 831
CaiI CAGNNNCTG 2 cut(s) 242, 919
CciI TCATGA 1 cut(s) 480
CfoI GCGC 1 cut(s) 565
Cfr10I RCCGGY 1 cut(s) 679
Cfr13I GGNCC 3 cut(s) 200, 445, 1444
CseI GACGC 2 cut(s) 1519, 1932
Csp6I GTAC 4 cut(s) 108, 634, 868, 1285
CviAII CATG 6 cut(s) 468, 481, 901, 1492, 1514, 1637
CviQI GTAC 4 cut(s) 108, 634, 868, 1285
DdeI CTNAG 2 cut(s) 1110, 1153
EaeI YGGCCR 3 cut(s) 522, 1516, 1772
Eam1104I CTCTTC 3 cut(s) 848, 1253, 1462
EarI CTCTTC 3 cut(s) 848, 1253, 1462
Eco130I CCWWGG 1 cut(s) 439
Eco31I GGTCTC 1 cut(s) 230
Eco32I GATATC 1 cut(s) 588
Eco47I GGWCC 2 cut(s) 445, 1444
Eco57I CTGAAG 2 cut(s) 1473, 1837
Eco88I CYCGRG 1 cut(s) 165
EcoNI CCTNNNNNAGG 1 cut(s) 540
EcoO109I RGGNCCY 2 cut(s) 200, 445
EcoRII CCWGG 3 cut(s) 235, 519, 1840
EcoRV GATATC 1 cut(s) 588
EcoT14I CCWWGG 1 cut(s) 439
ErhI CCWWGG 1 cut(s) 439
Esp3I CGTCTC 1 cut(s) 162
FaeI CATG 6 cut(s) 471, 484, 904, 1495, 1517, 1640
FalI AAGNNNNNCTT 2 cut(s) 432, 464
FaqI GGGAC 2 cut(s) 253, 458
FatI CATG 6 cut(s) 467, 480, 900, 1491, 1513, 1636
FbaI TGATCA 1 cut(s) 492
FblI GTMKAC 2 cut(s) 1179, 1784
FokI GGATG 1 cut(s) 713
FspBI CTAG 4 cut(s) 395, 980, 1268, 1953
GlaI GCGC 1 cut(s) 564
GsaI CCCAGC 1 cut(s) 1901
GsuI CTGGAG 4 cut(s) 349, 741, 1482, 1586
HaeIII GGCC 4 cut(s) 201, 524, 1518, 1774
HapII CCGG 1 cut(s) 680
HgaI GACGC 2 cut(s) 1519, 1932
HhaI GCGC 1 cut(s) 565
Hin1II CATG 6 cut(s) 471, 484, 904, 1495, 1517, 1640
Hin6I GCGC 1 cut(s) 563
HinP1I GCGC 1 cut(s) 563
HindIII AAGCTT 1 cut(s) 1112
HpaII CCGG 1 cut(s) 680
HphI GGTGA 7 cut(s) 206, 487, 740, 1010, 1054, 1642, 1656
Hpy166II GTNNAC 6 cut(s) 431, 911, 1006, 1180, 1444, 1785
Hpy188I TCNGA 6 cut(s) 98, 540, 709, 1537, 1739, 1894
Hpy8I GTNNAC 6 cut(s) 431, 911, 1006, 1180, 1444, 1785
HpyAV CCTTC 1 cut(s) 191
HpyCH4III ACNGT 6 cut(s) 107, 125, 185, 915, 1284, 1358
HpyCH4IV ACGT 2 cut(s) 60, 156
HpyCH4V TGCA 8 cut(s) 10, 68, 271, 452, 571, 648, 794, 922
HpyF10VI GCNNNNNNNGC 1 cut(s) 791
HpyF3I CTNAG 2 cut(s) 1110, 1153
HpySE526I ACGT 2 cut(s) 60, 156
Hsp92II CATG 6 cut(s) 471, 484, 904, 1495, 1517, 1640
HspAI GCGC 1 cut(s) 563
Ksp22I TGATCA 1 cut(s) 492
LmnI GCTCC 2 cut(s) 782, 1817
Lsp1109I GCAGC 6 cut(s) 464, 632, 813, 1605, 1688, 1923
LweI GCATC 3 cut(s) 287, 558, 1378
MaeI CTAG 4 cut(s) 395, 980, 1268, 1953
MaeII ACGT 2 cut(s) 60, 156
MboII GAAGA 8 cut(s) 865, 870, 1270, 1316, 1466, 1479, 1597, 1843
MflI RGATCY 6 cut(s) 332, 391, 418, 1672, 1862, 1889
MlsI TGGCCA 1 cut(s) 1518
MluCI AATT 8 cut(s) 923, 959, 1060, 1101, 1207, 1432, 1624, 1867
MluNI TGGCCA 1 cut(s) 1518
MlyI GAGTC 6 cut(s) 311, 510, 1270, 1328, 1655, 1965
MmeI TCCRAC 4 cut(s) 177, 390, 1274, 1456
Mox20I TGGCCA 1 cut(s) 1518
MscI TGGCCA 1 cut(s) 1518
MseI TTAA 2 cut(s) 1206, 1880
MslI CAYNNNNRTG 1 cut(s) 73
Msp20I TGGCCA 1 cut(s) 1518
MspI CCGG 1 cut(s) 680
MspR9I CCNGG 3 cut(s) 237, 521, 1842
MvaI CCWGG 3 cut(s) 237, 521, 1842
MvnI CGCG 2 cut(s) 1309, 1339
MwoI GCNNNNNNNGC 1 cut(s) 791
NlaIII CATG 6 cut(s) 471, 484, 904, 1495, 1517, 1640
NlaIV GGNNCC 3 cut(s) 446, 721, 1891
NmuCI GTSAC 5 cut(s) 728, 1358, 1507, 1630, 1957
NspI RCATGY 2 cut(s) 1495, 1640
PaeR7I CTCGAG 1 cut(s) 165
PagI TCATGA 1 cut(s) 480
PasI CCCWGGG 1 cut(s) 236
PciI ACATGT 1 cut(s) 1636
PfeI GAWTC 5 cut(s) 83, 210, 1126, 1561, 1613
PleI GAGTC 6 cut(s) 311, 509, 1269, 1328, 1655, 1964
PpsI GAGTC 6 cut(s) 311, 509, 1269, 1328, 1655, 1964
Ppu21I YACGTR 1 cut(s) 61
PpuMI RGGWCCY 1 cut(s) 445
PscI ACATGT 1 cut(s) 1636
Psp5II RGGWCCY 1 cut(s) 445
Psp6I CCWGG 3 cut(s) 235, 519, 1840
PspFI CCCAGC 1 cut(s) 1897
PspGI CCWGG 3 cut(s) 235, 519, 1840
PspN4I GGNNCC 3 cut(s) 446, 721, 1891
PspPI GGNCC 3 cut(s) 200, 445, 1444
PspPPI RGGWCCY 1 cut(s) 445
PstNI CAGNNNCTG 2 cut(s) 242, 919
PsuI RGATCY 6 cut(s) 332, 391, 418, 1672, 1862, 1889
RsaI GTAC 4 cut(s) 109, 635, 869, 1286
RsaNI GTAC 4 cut(s) 108, 634, 868, 1285
RseI CAYNNNNRTG 1 cut(s) 73
SaqAI TTAA 2 cut(s) 1206, 1880
Sau96I GGNCC 3 cut(s) 200, 445, 1444
SchI GAGTC 6 cut(s) 311, 510, 1270, 1328, 1655, 1965
ScrFI CCNGG 3 cut(s) 237, 521, 1842
SfaNI GCATC 3 cut(s) 287, 558, 1378
SfcI CTRYAG 2 cut(s) 1764, 1932
Sfr274I CTCGAG 1 cut(s) 165
SinI GGWCC 2 cut(s) 445, 1444
SlaI CTCGAG 1 cut(s) 165
SmiMI CAYNNNNRTG 1 cut(s) 73
SmlI CTYRAG 1 cut(s) 165
SmoI CTYRAG 1 cut(s) 165
Sse9I AATT 8 cut(s) 923, 959, 1060, 1101, 1207, 1432, 1624, 1867
SsiI CCGC 6 cut(s) 947, 1040, 1048, 1339, 1412, 1645
SspI AATATT 1 cut(s) 1791
SspMI CTAG 4 cut(s) 395, 980, 1268, 1953
StyD4I CCNGG 3 cut(s) 235, 519, 1840
StyI CCWWGG 1 cut(s) 439
TaaI ACNGT 6 cut(s) 107, 125, 185, 915, 1284, 1358
TaiI ACGT 2 cut(s) 63, 159
TaqII GACCGA 2 cut(s) 329, 494
TasI AATT 8 cut(s) 923, 959, 1060, 1101, 1207, 1432, 1624, 1867
TauI GCSGC 4 cut(s) 950, 1051, 1342, 1648
TfiI GAWTC 5 cut(s) 83, 210, 1126, 1561, 1613
Tru1I TTAA 2 cut(s) 1206, 1880
Tru9I TTAA 2 cut(s) 1206, 1880
TseFI GTSAC 5 cut(s) 728, 1358, 1507, 1630, 1957
TseI GCWGC 6 cut(s) 452, 645, 826, 1593, 1701, 1911
Tsp45I GTSAC 5 cut(s) 728, 1358, 1507, 1630, 1957
TspDTI ATGAA 6 cut(s) 469, 497, 646, 1179, 1316, 1412
TspGWI ACGGA 2 cut(s) 796, 865
VpaK11BI GGWCC 2 cut(s) 445, 1444
XagI CCTNNNNNAGG 1 cut(s) 540
XapI RAATTY 2 cut(s) 959, 1432
XbaI TCTAGA 1 cut(s) 394
XceI RCATGY 2 cut(s) 1495, 1640
XhoI CTCGAG 1 cut(s) 165
XmiI GTMKAC 2 cut(s) 1179, 1784
XspI CTAG 4 cut(s) 395, 980, 1268, 1953
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.