AT5G26805

No description available

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
9427543 .. 9428067
525 bp
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UTR
Exon/CDS
Intron
AT5G26805.1

Sequence Viewer

Length: 471 bp
ATGATAAAATCATTGTTCTACACTTTCCTTCAAACGAAACACCAAGAAGAAAGCAACAACTCAAGAGATCCTAATTATCCTCTATTTCCTCAAGAGATCGAGATTCGACCCATAGCTTATTTCCCTTGGGAAATCATCAAAACTCTAACAACCGATGAAATCATAAGTAAGTTCCAACTTCCAATGGAAAAAATCCGAGATACCATGCTTAGACATGCTTCAGAAGAAGACATATATCGCACAAAATTTATGAGTTGTGAGACCAATATATTGGTAAAAGATCTCGACACAAACACTATCCATCAAGGTAAATTGTGGAAGCATCCATGCGAAAATAATTTTGCATTGCGTGAATCTTGGATCGAAGAATTTGTGAAGAGGAGGAGGCTTGTGGTTGGCATGGTGGTTGGTATGTATTGGGATTTTGAGGCCTGCATGTTTTGTTTCTCTGTGTTAGATGGAAGACAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

156

Amino Acids

18.77

Weight (kDa)

5.83

Isoelectric Point (pI)

65.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0026702)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G26805
prunus_persica Prupe.1G396400_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 62, 368
AcsI RAATTY 2 cut(s) 245, 368
AcuI CTGAAG 1 cut(s) 204
AgsI TTSAA 1 cut(s) 32
AluBI AGCT 1 cut(s) 116
AluI AGCT 1 cut(s) 116
Alw26I GTCTC 1 cut(s) 254
AlwI GGATC 2 cut(s) 62, 368
AoxI GGCC 1 cut(s) 429
ApoI RAATTY 2 cut(s) 245, 368
BbsI GAAGAC 1 cut(s) 234
BccI CCATC 2 cut(s) 309, 452
BcoDI GTCTC 1 cut(s) 254
BglII AGATCT 1 cut(s) 280
BmsI GCATC 1 cut(s) 331
BpiI GAAGAC 1 cut(s) 234
BpuEI CTTGAG 2 cut(s) 46, 75
BsaI GGTCTC 1 cut(s) 254
BsaJI CCNNGG 1 cut(s) 125
Bse3DI GCAATG 1 cut(s) 344
BseDI CCNNGG 1 cut(s) 125
BseGI GGATG 1 cut(s) 322
BseMI GCAATG 1 cut(s) 344
BseRI GAGGAG 2 cut(s) 394, 397
BshFI GGCC 1 cut(s) 431
BsmAI GTCTC 1 cut(s) 254
BsnI GGCC 1 cut(s) 431
Bso31I GGTCTC 1 cut(s) 254
Bsp143I GATC 4 cut(s) 67, 96, 280, 360
BspANI GGCC 1 cut(s) 431
BspPI GGATC 2 cut(s) 62, 368
BspTNI GGTCTC 1 cut(s) 254
BsrDI GCAATG 1 cut(s) 344
BssECI CCNNGG 1 cut(s) 125
BssMI GATC 4 cut(s) 67, 96, 280, 360
BssT1I CCWWGG 1 cut(s) 125
Bst6I CTCTTC 1 cut(s) 371
BstC8I GCNNGC 1 cut(s) 433
BstDEI CTNAG 1 cut(s) 209
BstF5I GGATG 1 cut(s) 322
BstKTI GATC 4 cut(s) 70, 99, 283, 363
BstMAI GTCTC 1 cut(s) 254
BstMBI GATC 4 cut(s) 67, 96, 280, 360
BstNSI RCATGY 2 cut(s) 218, 439
BstV2I GAAGAC 1 cut(s) 234
BstX2I RGATCY 2 cut(s) 67, 280
BstXI CCANNNNNNTGG 1 cut(s) 271
BstYI RGATCY 2 cut(s) 67, 280
BsuRI GGCC 1 cut(s) 431
BtsCI GGATG 1 cut(s) 322
Cac8I GCNNGC 1 cut(s) 433
CviAII CATG 5 cut(s) 205, 215, 327, 400, 436
CviJI RGCY 3 cut(s) 116, 388, 431
CviKI_1 RGCY 3 cut(s) 116, 388, 431
DdeI CTNAG 1 cut(s) 209
DpnI GATC 4 cut(s) 69, 98, 282, 362
DpnII GATC 4 cut(s) 67, 96, 280, 360
Eam1104I CTCTTC 1 cut(s) 371
EarI CTCTTC 1 cut(s) 371
Eco130I CCWWGG 1 cut(s) 125
Eco147I AGGCCT 1 cut(s) 431
Eco31I GGTCTC 1 cut(s) 254
Eco57I CTGAAG 1 cut(s) 204
EcoT14I CCWWGG 1 cut(s) 125
ErhI CCWWGG 1 cut(s) 125
FaeI CATG 5 cut(s) 208, 218, 330, 403, 439
FatI CATG 5 cut(s) 204, 214, 326, 399, 435
FokI GGATG 1 cut(s) 309
HaeIII GGCC 1 cut(s) 431
Hin1II CATG 5 cut(s) 208, 218, 330, 403, 439
HinfI GANTC 2 cut(s) 103, 353
Hpy188I TCNGA 2 cut(s) 197, 223
Hpy188III TCNNGA 4 cut(s) 63, 92, 100, 284
HpyAV CCTTC 1 cut(s) 38
HpyCH4V TGCA 2 cut(s) 344, 435
HpyF3I CTNAG 1 cut(s) 209
Hsp92II CATG 5 cut(s) 208, 218, 330, 403, 439
Kzo9I GATC 4 cut(s) 67, 96, 280, 360
LpnPI CCDG 1 cut(s) 445
LweI GCATC 1 cut(s) 331
MalI GATC 4 cut(s) 69, 98, 282, 362
MboI GATC 4 cut(s) 67, 96, 280, 360
MboII GAAGA 5 cut(s) 59, 236, 239, 377, 388
MflI RGATCY 2 cut(s) 67, 280
MluCI AATT 5 cut(s) 73, 245, 311, 337, 368
MmeI TCCRAC 1 cut(s) 199
MnlI CCTC 6 cut(s) 90, 99, 372, 375, 378, 421
NdeII GATC 4 cut(s) 67, 96, 280, 360
NlaIII CATG 5 cut(s) 208, 218, 330, 403, 439
NspI RCATGY 2 cut(s) 218, 439
PceI AGGCCT 1 cut(s) 431
PfeI GAWTC 2 cut(s) 103, 353
PsuI RGATCY 2 cut(s) 67, 280
Sau3AI GATC 4 cut(s) 67, 96, 280, 360
SetI ASST 2 cut(s) 118, 310
SfaNI GCATC 1 cut(s) 331
SmlI CTYRAG 2 cut(s) 61, 90
SmoI CTYRAG 2 cut(s) 61, 90
Sse9I AATT 5 cut(s) 73, 245, 311, 337, 368
SseBI AGGCCT 1 cut(s) 431
StuI AGGCCT 1 cut(s) 431
StyI CCWWGG 1 cut(s) 125
TaqI TCGA 4 cut(s) 99, 106, 285, 363
TasI AATT 5 cut(s) 73, 245, 311, 337, 368
TfiI GAWTC 2 cut(s) 103, 353
TspDTI ATGAA 1 cut(s) 171
XapI RAATTY 2 cut(s) 245, 368
XceI RCATGY 2 cut(s) 218, 439
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.