Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0026782

Physical Location & Seq

Genomic Coordinates Forward (+)

24758189 .. 24760789

Gene Structure 2601 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G61570.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1086 bp

ATGAGAAAATCCCATTTGGTAAAACTGATACTTGCAGTATCTCTACCAACAACATTCTTGATCATGATCGCCATCATCATAATCTTCATCTTCTGTAGAAGAACAACAACAGAGACCAATGAAGTTCAATACGACGTCGAATCTCCTTACGAGAAACAAGAATTTTCCGATAACGGATCCGAAACAGAGGAGGAGCTTATCATCTTCAACGGTGGAGAAGATCTAACGATCTGCGATATACTCGATGCTCCAGGAGAAGTCATCGGAAAATCAAGCTACGGTACATTATACAAAGCGACGTTACAAAGAAGTGGGAAAGTTAGAGTTCTTAGGTTCCTTCGACCTTTATGTGCTGTGAATTCAGATTCTAAGGAGTTTAATGGCGTCATTGAGTCACTTGGGTTTGTTCGACATGATAATCTCGTTCCTCTGTTAGGGTTTTACGTTGGCAACAGAGGAGAGAAGCTTATGATTCATCCCTTCTTCGGTAGTTCCGGGAATCTTTCTGCGTTCATCAAATTTTTGGCAGGTGGAGATGTTGACGCACACAAATGGAGCAACATTTTGAGTATCACCATTGGAATAGCAAAAGCTCTTGATCATCTCCATACAGGAATGCAGAAACCGATTGTTCACGGAAATCTGAAGTCGAAAAATGTTCTACTAGACAAGAGTTTTAGGCCTAGAGTCTCTGATTTCGGCTTGCATTTGCTTTTGAACCTTGCAGCTGGGCAAGAGGTTCTAGAAGCTTCAGCTGCAGAGGGTTACAAAGCGCCTGAGTTGATCAAGATGAAGGAAGTAAGCAAGGAGAGTGATGTATATAGTTTCGGTGTGATCATGCTTGAGTTAGTCTCTGGTAAAGAGCCGACAAACAAGAATCCAACGGGATCTGTACTTGATCGTAATAGGTTGTCGGATTTGTACCGTCCTGAGATTATTAGGAGATGTCTGAAGGATGGAAATGGTGTGACCGAAGAGTGTGTCCTCGAGTACTTTCAGCTTGCAATGTCTTGTTGCTCTCCATCGCCTACTCTTAGGCCGAGCTTCAAGCAAGTATTGAGGAAGCTTGAAGAGATCAGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0009506 GO:0016020 GO:0030054 GO:0044464 GO:0055044 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

361

Amino Acids

40.25

Weight (kDa)

7.08

Isoelectric Point (pI)

41.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	86 - 353	7e-32	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	86 - 351	2.5e-28	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0026782)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G61570 AT5G61570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	518
AatII	GACGTC	1 cut(s)	138
Acc36I	ACCTGC	1 cut(s)	518
AclWI	GGATC	3 cut(s)	171, 184, 895
AcsI	RAATTY	3 cut(s)	161, 358, 518
AcuI	CTGAAG	3 cut(s)	665, 735, 971
AcyI	GRCGYC	2 cut(s)	135, 384
AfaI	GTAC	4 cut(s)	283, 894, 923, 992
AfiI	CCNNNNNNNGG	2 cut(s)	434, 485
AgsI	TTSAA	5 cut(s)	128, 208, 718, 1048, 1070
AjnI	CCWGG	1 cut(s)	250
Alw26I	GTCTC	3 cut(s)	107, 694, 856
AlwI	GGATC	3 cut(s)	171, 184, 895
Ama87I	CYCGRG	1 cut(s)	986
AoxI	GGCC	2 cut(s)	680, 1037
ApeKI	GCWGC	2 cut(s)	725, 755
ApoI	RAATTY	3 cut(s)	161, 358, 518
ArsI	GACNNNNNNTTYG	2 cut(s)	966, 998
AspLEI	GCGC	1 cut(s)	775
AsuC2I	CCSGG	1 cut(s)	496
AsuHPI	GGTGA	1 cut(s)	565
AvaI	CYCGRG	1 cut(s)	986
BamHI	GGATCC	1 cut(s)	176
BbvI	GCAGC	2 cut(s)	737, 742
BccI	CCATC	3 cut(s)	80, 950, 1030
BciT130I	CCWGG	1 cut(s)	252
BclI	TGATCA	4 cut(s)	60, 598, 783, 834
BcnI	CCSGG	1 cut(s)	496
BcoDI	GTCTC	3 cut(s)	107, 694, 856
BfaI	CTAG	3 cut(s)	665, 684, 743
BfmI	CTRYAG	2 cut(s)	94, 756
BfoI	RGCGCY	1 cut(s)	776
BfuAI	ACCTGC	1 cut(s)	518
BglII	AGATCT	1 cut(s)	220
BisI	GCNGC	2 cut(s)	726, 756
BlsI	GCNGC	2 cut(s)	727, 757
BmcAI	AGTACT	1 cut(s)	992
Bme1390I	CCNGG	2 cut(s)	252, 496
BmeT110I	CYCGRG	1 cut(s)	986
BmiI	GGNNCC	2 cut(s)	178, 335
BmrFI	CCNGG	2 cut(s)	252, 496
BmsI	GCATC	1 cut(s)	235
BplI	GAGNNNNNCTC	2 cut(s)	836, 868
BpmI	CTGGAG	1 cut(s)	234
BpuEI	CTTGAG	1 cut(s)	863
BpuMI	CCSGG	1 cut(s)	496
BsaBI	GATNNNNATC	2 cut(s)	65, 71
BsaHI	GRCGYC	2 cut(s)	135, 384
BsaI	GGTCTC	1 cut(s)	107
Bsc4I	CCNNNNNNNGG	2 cut(s)	434, 485
Bse3DI	GCAATG	1 cut(s)	1011
Bse8I	GATNNNNATC	2 cut(s)	65, 71
BseBI	CCWGG	1 cut(s)	252
BseGI	GGATG	2 cut(s)	475, 961
BseJI	GATNNNNATC	2 cut(s)	65, 71
BseLI	CCNNNNNNNGG	2 cut(s)	434, 485
BseMI	GCAATG	1 cut(s)	1011
BseMII	CTCAG	2 cut(s)	768, 921
BseRI	GAGGAG	3 cut(s)	203, 206, 471
BseXI	GCAGC	2 cut(s)	737, 742
BseYI	CCCAGC	1 cut(s)	728
BshFI	GGCC	2 cut(s)	682, 1039
BsiHKCI	CYCGRG	1 cut(s)	986
BsiSI	CCGG	1 cut(s)	495
BslI	CCNNNNNNNGG	2 cut(s)	434, 485
BsmAI	GTCTC	3 cut(s)	107, 694, 856
BsmI	GAATGC	1 cut(s)	621
BsnI	GGCC	2 cut(s)	682, 1039
Bso31I	GGTCTC	1 cut(s)	107
BsoBI	CYCGRG	1 cut(s)	986
BspANI	GGCC	2 cut(s)	682, 1039
BspCNI	CTCAG	2 cut(s)	769, 922
BspHI	TCATGA	1 cut(s)	63
BspLI	GGNNCC	2 cut(s)	178, 335
BspMAI	CTGCAG	1 cut(s)	760
BspMI	ACCTGC	1 cut(s)	518
BspPI	GGATC	3 cut(s)	171, 184, 895
BspTNI	GGTCTC	1 cut(s)	107
BsrDI	GCAATG	1 cut(s)	1011
BssNI	GRCGYC	2 cut(s)	135, 384
Bst2UI	CCWGG	1 cut(s)	252
Bst4CI	ACNGT	3 cut(s)	212, 281, 926
Bst6I	CTCTTC	2 cut(s)	969, 1065
BstACI	GRCGYC	2 cut(s)	135, 384
BstC8I	GCNNGC	2 cut(s)	704, 1002
BstDEI	CTNAG	5 cut(s)	329, 369, 777, 930, 1034
BstENI	CCTNNNNNAGG	1 cut(s)	432
BstF5I	GGATG	2 cut(s)	475, 961
BstH2I	RGCGCY	1 cut(s)	776
BstHHI	GCGC	1 cut(s)	775
BstMAI	GTCTC	3 cut(s)	107, 694, 856
BstMWI	GCNNNNNNNGC	1 cut(s)	755
BstNI	CCWGG	1 cut(s)	252
BstSCI	CCNGG	2 cut(s)	250, 494
BstSFI	CTRYAG	2 cut(s)	94, 756
BstV1I	GCAGC	2 cut(s)	737, 742
BstX2I	RGATCY	3 cut(s)	176, 220, 887
BstYI	RGATCY	3 cut(s)	176, 220, 887
BsuRI	GGCC	2 cut(s)	682, 1039
BtgZI	GCGATG	1 cut(s)	1008
BtsCI	GGATG	2 cut(s)	475, 961
BveI	ACCTGC	1 cut(s)	518
Cac8I	GCNNGC	2 cut(s)	704, 1002
CciI	TCATGA	1 cut(s)	63
CfoI	GCGC	1 cut(s)	775
CseI	GACGC	2 cut(s)	373, 551
Csp6I	GTAC	4 cut(s)	282, 893, 922, 991
CviAII	CATG	3 cut(s)	64, 413, 838
CviQI	GTAC	4 cut(s)	282, 893, 922, 991
DdeI	CTNAG	5 cut(s)	329, 369, 777, 930, 1034
Eam1104I	CTCTTC	2 cut(s)	969, 1065
EarI	CTCTTC	2 cut(s)	969, 1065
Eco147I	AGGCCT	1 cut(s)	682
Eco31I	GGTCTC	1 cut(s)	107
Eco57I	CTGAAG	3 cut(s)	665, 735, 971
Eco88I	CYCGRG	1 cut(s)	986
EcoNI	CCTNNNNNAGG	1 cut(s)	432
EcoRI	GAATTC	1 cut(s)	358
EcoRII	CCWGG	1 cut(s)	250
FaeI	CATG	3 cut(s)	67, 416, 841
FatI	CATG	3 cut(s)	63, 412, 837
FbaI	TGATCA	4 cut(s)	60, 598, 783, 834
Fnu4HI	GCNGC	2 cut(s)	726, 756
FokI	GGATG	2 cut(s)	462, 968
Fsp4HI	GCNGC	2 cut(s)	726, 756
FspBI	CTAG	3 cut(s)	665, 684, 743
GlaI	GCGC	1 cut(s)	774
GluI	GCNGC	2 cut(s)	726, 756
GsaI	CCCAGC	1 cut(s)	732
GsuI	CTGGAG	1 cut(s)	234
HaeII	RGCGCY	1 cut(s)	776
HaeIII	GGCC	2 cut(s)	682, 1039
HapII	CCGG	1 cut(s)	495
HgaI	GACGC	2 cut(s)	373, 551
HhaI	GCGC	1 cut(s)	775
Hin1I	GRCGYC	2 cut(s)	135, 384
Hin1II	CATG	3 cut(s)	67, 416, 841
Hin6I	GCGC	1 cut(s)	773
HinP1I	GCGC	1 cut(s)	773
HincII	GTYRAC	1 cut(s)	541
HindII	GTYRAC	1 cut(s)	541
HindIII	AAGCTT	3 cut(s)	464, 747, 1064
HinfI	GANTC	7 cut(s)	140, 365, 392, 472, 499, 687, 877
HpaII	CCGG	1 cut(s)	495
HphI	GGTGA	1 cut(s)	565
Hpy166II	GTNNAC	2 cut(s)	541, 634
Hpy188I	TCNGA	8 cut(s)	169, 181, 266, 364, 645, 694, 916, 951
Hpy188III	TCNNGA	7 cut(s)	58, 64, 596, 743, 787, 929, 1078
Hpy8I	GTNNAC	2 cut(s)	541, 634
Hpy99I	CGWCG	3 cut(s)	137, 140, 301
HpyAV	CCTTC	4 cut(s)	347, 490, 787, 946
HpyCH4III	ACNGT	3 cut(s)	212, 281, 926
HpyCH4IV	ACGT	3 cut(s)	135, 299, 444
HpyCH4V	TGCA	6 cut(s)	35, 619, 706, 725, 758, 1004
HpyF10VI	GCNNNNNNNGC	1 cut(s)	755
HpyF3I	CTNAG	5 cut(s)	329, 369, 777, 930, 1034
HpySE526I	ACGT	3 cut(s)	135, 299, 444
Hsp92I	GRCGYC	2 cut(s)	135, 384
Hsp92II	CATG	3 cut(s)	67, 416, 841
HspAI	GCGC	1 cut(s)	773
Ksp22I	TGATCA	4 cut(s)	60, 598, 783, 834
LmnI	GCTCC	3 cut(s)	193, 253, 555
Lsp1109I	GCAGC	2 cut(s)	737, 742
LweI	GCATC	1 cut(s)	235
MaeI	CTAG	3 cut(s)	665, 684, 743
MaeII	ACGT	3 cut(s)	135, 299, 444
MaeIII	GTNAC	4 cut(s)	300, 393, 764, 967
MboII	GAAGA	8 cut(s)	76, 82, 111, 196, 230, 475, 986, 1082
MflI	RGATCY	3 cut(s)	176, 220, 887
MluCI	AATT	3 cut(s)	161, 358, 518
MlyI	GAGTC	2 cut(s)	401, 696
MmeI	TCCRAC	2 cut(s)	894, 905
MnlI	CCTC	8 cut(s)	181, 184, 438, 449, 730, 754, 995, 1053
MseI	TTAA	1 cut(s)	378
MslI	CAYNNNNRTG	1 cut(s)	550
MspA1I	CMGCKG	2 cut(s)	728, 755
MspI	CCGG	1 cut(s)	495
MspR9I	CCNGG	2 cut(s)	252, 496
Mva1269I	GAATGC	1 cut(s)	621
MvaI	CCWGG	1 cut(s)	252
MwoI	GCNNNNNNNGC	1 cut(s)	755
NciI	CCSGG	1 cut(s)	496
NlaIII	CATG	3 cut(s)	67, 416, 841
NlaIV	GGNNCC	2 cut(s)	178, 335
NmeAIII	GCCGAG	1 cut(s)	1065
NmuCI	GTSAC	2 cut(s)	393, 967
PaeR7I	CTCGAG	1 cut(s)	986
PagI	TCATGA	1 cut(s)	63
PaqCI	CACCTGC	1 cut(s)	518
PceI	AGGCCT	1 cut(s)	682
PctI	GAATGC	1 cut(s)	621
PfeI	GAWTC	5 cut(s)	140, 365, 472, 499, 877
PfoI	TCCNGGA	2 cut(s)	250, 494
PkrI	GCNGC	2 cut(s)	727, 757
PleI	GAGTC	2 cut(s)	400, 695
PpsI	GAGTC	2 cut(s)	400, 695
Psp6I	CCWGG	1 cut(s)	250
PspFI	CCCAGC	1 cut(s)	728
PspGI	CCWGG	1 cut(s)	250
PspN4I	GGNNCC	2 cut(s)	178, 335
PspXI	VCTCGAGB	1 cut(s)	986
PstI	CTGCAG	1 cut(s)	760
PsuI	RGATCY	3 cut(s)	176, 220, 887
PvuII	CAGCTG	2 cut(s)	728, 755
RsaI	GTAC	4 cut(s)	283, 894, 923, 992
RsaNI	GTAC	4 cut(s)	282, 893, 922, 991
RseI	CAYNNNNRTG	1 cut(s)	550
SaqAI	TTAA	1 cut(s)	378
SatI	GCNGC	2 cut(s)	726, 756
ScaI	AGTACT	1 cut(s)	992
SchI	GAGTC	2 cut(s)	401, 696
ScrFI	CCNGG	2 cut(s)	252, 496
SfaNI	GCATC	1 cut(s)	235
SfcI	CTRYAG	2 cut(s)	94, 756
Sfr274I	CTCGAG	1 cut(s)	986
SlaI	CTCGAG	1 cut(s)	986
SmiMI	CAYNNNNRTG	1 cut(s)	550
SmlI	CTYRAG	2 cut(s)	842, 986
SmoI	CTYRAG	2 cut(s)	842, 986
Sse9I	AATT	3 cut(s)	161, 358, 518
SseBI	AGGCCT	1 cut(s)	682
SspMI	CTAG	3 cut(s)	665, 684, 743
StuI	AGGCCT	1 cut(s)	682
StyD4I	CCNGG	2 cut(s)	250, 494
TaaI	ACNGT	3 cut(s)	212, 281, 926
TaiI	ACGT	3 cut(s)	138, 302, 447
TaqI	TCGA	6 cut(s)	138, 243, 340, 409, 650, 987
TaqII	GACCGA	1 cut(s)	986
TasI	AATT	3 cut(s)	161, 358, 518
TatI	WGTACW	2 cut(s)	892, 990
TfiI	GAWTC	5 cut(s)	140, 365, 472, 499, 877
Tru1I	TTAA	1 cut(s)	378
Tru9I	TTAA	1 cut(s)	378
TseFI	GTSAC	2 cut(s)	393, 967
TseI	GCWGC	2 cut(s)	725, 755
Tsp45I	GTSAC	2 cut(s)	393, 967
TspDTI	ATGAA	5 cut(s)	76, 135, 464, 502, 806
TspGWI	ACGGA	2 cut(s)	189, 651
XagI	CCTNNNNNAGG	1 cut(s)	432
XapI	RAATTY	3 cut(s)	161, 358, 518
XbaI	TCTAGA	1 cut(s)	742
XhoI	CTCGAG	1 cut(s)	986
XspI	CTAG	3 cut(s)	665, 684, 743
ZraI	GACGTC	1 cut(s)	136
ZrmI	AGTACT	1 cut(s)	992

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.