FvH4_3g13700

No description available

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
8228409 .. 8229899
1491 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g13700.t1

Sequence Viewer

Length: 204 bp
ATGGCAGTAGAGCTTGTCCCTTCGGGGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCATAAATCGAGAAATGGTCCAAATTTTTTTGGGGATTTTTCCCTCCCTCCCTTTTCGATTCAGGTGTCCATCCATTCAGTTGGATCATCAAGCGTAGACTTGTCTTCAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

68

Amino Acids

7.24

Weight (kDa)

8.29

Isoelectric Point (pI)

38.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0027788)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g13700
prunus_persica Prupe.7G069600_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 77
AccI GTMKAC 1 cut(s) 186
AclWI GGATC 1 cut(s) 181
AcsI RAATTY 1 cut(s) 112
AcuI CTGAAG 1 cut(s) 180
AfiI CCNNNNNNNGG 1 cut(s) 79
AluBI AGCT 1 cut(s) 13
AluI AGCT 1 cut(s) 13
AlwI GGATC 1 cut(s) 181
AoxI GGCC 1 cut(s) 68
ApoI RAATTY 1 cut(s) 112
AspLEI GCGC 1 cut(s) 78
AspS9I GGNCC 2 cut(s) 69, 107
AvaII GGWCC 1 cut(s) 107
BbsI GAAGAC 1 cut(s) 186
BccI CCATC 1 cut(s) 167
Bme18I GGWCC 1 cut(s) 107
BmgT120I GGNCC 2 cut(s) 69, 107
BmiI GGNNCC 1 cut(s) 71
BpiI GAAGAC 1 cut(s) 186
Bsc4I CCNNNNNNNGG 1 cut(s) 79
BseGI GGATG 3 cut(s) 29, 88, 159
BseLI CCNNNNNNNGG 1 cut(s) 79
BshFI GGCC 1 cut(s) 70
BslFI GGGAC 2 cut(s) 2, 40
BslI CCNNNNNNNGG 1 cut(s) 79
BsmFI GGGAC 2 cut(s) 2, 40
BsnI GGCC 1 cut(s) 70
Bsp143I GATC 1 cut(s) 173
BspANI GGCC 1 cut(s) 70
BspLI GGNNCC 1 cut(s) 71
BspPI GGATC 1 cut(s) 181
BssMI GATC 1 cut(s) 173
BstENI CCTNNNNNAGG 1 cut(s) 77
BstF5I GGATG 3 cut(s) 29, 88, 159
BstHHI GCGC 1 cut(s) 78
BstKTI GATC 1 cut(s) 176
BstMBI GATC 1 cut(s) 173
BstV2I GAAGAC 1 cut(s) 186
BstXI CCANNNNNNTGG 1 cut(s) 170
BsuRI GGCC 1 cut(s) 70
BtsCI GGATG 3 cut(s) 29, 88, 159
CfoI GCGC 1 cut(s) 78
Cfr13I GGNCC 2 cut(s) 69, 107
CviAII CATG 2 cut(s) 66, 201
CviJI RGCY 2 cut(s) 13, 70
CviKI_1 RGCY 2 cut(s) 13, 70
DpnI GATC 1 cut(s) 175
DpnII GATC 1 cut(s) 173
Eco47I GGWCC 1 cut(s) 107
Eco57I CTGAAG 1 cut(s) 180
EcoNI CCTNNNNNAGG 1 cut(s) 77
FaeI CATG 2 cut(s) 69, 204
FaiI YATR 3 cut(s) 67, 93, 202
FaqI GGGAC 2 cut(s) 2, 40
FatI CATG 2 cut(s) 65, 200
FblI GTMKAC 1 cut(s) 186
FokI GGATG 3 cut(s) 16, 95, 146
FspI TGCGCA 1 cut(s) 77
GlaI GCGC 1 cut(s) 77
HaeIII GGCC 1 cut(s) 70
HhaI GCGC 1 cut(s) 78
Hin1II CATG 2 cut(s) 69, 204
Hin6I GCGC 1 cut(s) 76
HinP1I GCGC 1 cut(s) 76
HinfI GANTC 1 cut(s) 148
Hpy166II GTNNAC 1 cut(s) 187
Hpy188I TCNGA 1 cut(s) 34
Hpy188III TCNNGA 1 cut(s) 99
Hpy8I GTNNAC 1 cut(s) 187
HpyAV CCTTC 1 cut(s) 30
Hsp92II CATG 2 cut(s) 69, 204
HspAI GCGC 1 cut(s) 76
Kzo9I GATC 1 cut(s) 173
LpnPI CCDG 2 cut(s) 86, 137
MalI GATC 1 cut(s) 175
MboI GATC 1 cut(s) 173
MboII GAAGA 2 cut(s) 69, 186
MluCI AATT 2 cut(s) 39, 112
MmeI TCCRAC 1 cut(s) 151
MnlI CCTC 2 cut(s) 143, 147
NdeII GATC 1 cut(s) 173
NlaIII CATG 2 cut(s) 69, 204
NlaIV GGNNCC 1 cut(s) 71
NsbI TGCGCA 1 cut(s) 77
PcsI WCGNNNNNNNCGW 1 cut(s) 95
PfeI GAWTC 1 cut(s) 148
PspN4I GGNNCC 1 cut(s) 71
PspPI GGNCC 2 cut(s) 69, 107
Sau3AI GATC 1 cut(s) 173
Sau96I GGNCC 2 cut(s) 69, 107
SetI ASST 2 cut(s) 15, 156
SgeI CNNG 9 cut(s) 26, 36, 78, 85, 91, 100, 111, 164, 192
SinI GGWCC 1 cut(s) 107
Sse9I AATT 2 cut(s) 39, 112
TaqI TCGA 2 cut(s) 98, 146
TasI AATT 2 cut(s) 39, 112
TfiI GAWTC 1 cut(s) 148
VpaK11BI GGWCC 1 cut(s) 107
XagI CCTNNNNNAGG 1 cut(s) 77
XapI RAATTY 1 cut(s) 112
XmiI GTMKAC 1 cut(s) 186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.