FvH4_4g00710

Type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
618426 .. 623330
4905 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g00710.t1

Sequence Viewer

Length: 1779 bp
ATGGGAGATGGGAATTCCAAGAAAAGCAAGCTCTCATGGTCAAAGAAGATGGTCAGGAAGTGGTTCAATATCAAGAGCAAAACTGAGGACTTTCAGGCAGATGATGTTGTTTATGGAGGAGCTGAGGTTGAATACAGGACTAGCTTCTCAGAGAGGGAACCGTGCACGATTAAGAAAAGCAAAACAGAGAAGTTCAGCAAGAACACTGAGCAGGTCCGTCGACGAAAGATGAATCTTGACCATCCTCGAATCATAGATGTGCAGAACCATAGCATTTTTGTTGCTACATGGAATGTGGCCGGAAGATCTCCACCAAGCAACTTAAATATGGATGAGTGGCTTCATGCCTCACCTCCAGCAGACATTTATGTTCTTGGGTTTCAAGAGATAGTTCCACTAAATGCTGGTAATGTTCTGGGGGCAGAAGACAATGGCCCTGCCAAGAAATGGTTGGCCCTCATTCGGAAAACTTTAAACAATCTTCCAGGTACTAGTGGTGGCGGTGGCTGCTATACGCCATCTCCCATCCCACAGCCAATTGTTGAGTTACATGCAGATTTTGAGGGATCTGCTAGGCAGAAGAGCTCATCTTTTTTTCAAAGGAGATCATTCCAGGCAACCCCTAGCTGGCGAACGGAGAATGACCCTTCAGCTTCACAACCCCGACTTGATCGGAGATTCAGTGTTTGTGATCGGGTGATCTTTGGTCACAGGCCAAGTGACTATGATCCCAACTTCAGATGGGGTCACAGGCCAAGCGACTATTCAAGGCATAGTGACTACTCAGGTCCGAGTGACTATTATTCTAGGCCTAGTGACTACTCAAGGCCGAGTGACTTTTCTAGGTGGGGTTCGTCCGATGATGATAATGGACCAGGCGATTCACCAAGTACTGTTTTATTCTCACCAATGTCCTATGCTGGATCTGCATCCAATGACAATGGATATAGAATGCCAGGGCATTCAAGGTACAACTTAGTTGCAAGCAAGCAAATGGTGGGCATATTTCTTACAGTATGGGTCAAAAGTGAACTGAGGGATCATGTTAAAAACATGAAGGTATCATGTGTAGGAAGAGGATTAATGGGATACCTTGGAAATAAGGGATCCATTTCAGTCAGCATGTCTTTGCACGATACAACCTTTTGCTTTATTTGTACTCATTTAACATCAGGACAGAAGGAGGGTGATGAGCTAAGAAGGAATTCTGATGTCATGGAGATCCTTAGGAAAACAAGGTTTCCAAAGGTTAATGGCTCTAGCGCGTTGAAAAACCCAGAAACAATCTTGGAGCATGATCGAGTTATCTGGCTTGGGGATTTAAATTATCGAATTTCCCTCTCTTACCGCTCTGCTAAGGCATTAGTCGAGATGCAAAACTGGAGGGCCTTGTTAGAGAGAGACCAGTTAAGGATAGAGCAAAAACGTGGTCGCGCATTTGTGGGATGGAACGAGGGGAAGATTTACTTCCCACCAACCTACAAGTATTCTACTAATTCAGACAGATATGCAGGGGATGATATGCACCCAAAGGAGAAACGTCGAACACCTGCTTGGTGTGATCGAATATTGTGGTATGGTGAAGGTCTCCAACAGTTATCTTATGTCCGTGGGGAATCTAGGTTTTCAGATCATAGACCAGTTTATGGCATATTTTGGGCGGAGGTTGAGTCAAGTCACAACAAACTGAAGAAAAGCACTAGTTATTCTAGTTCTAGGATTGAAGTAGAGGAGCTTCTGCCATATTCACATGGATATACTGAGCTAAACTTTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Pfam Domains
Protein Families

Protein Analysis

593

Amino Acids

67.66

Weight (kDa)

9.25

Isoelectric Point (pI)

51.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo_endo_phos2 PF22669 96 - 160 8.9e-07 Endonuclease/Exonuclease/phosphatase family 2
Exo_endo_phos2 PF22669 319 - 550 3.4e-64 Endonuclease/Exonuclease/phosphatase family 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010814)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1558
Acc36I ACCTGC 2 cut(s) 202, 1558
AccB7I CCANNNNNTGG 2 cut(s) 447, 1646
AccBSI CCGCTC 1 cut(s) 1350
AccI GTMKAC 1 cut(s) 220
AccII CGCG 2 cut(s) 1265, 1434
AciI CCGC 3 cut(s) 501, 1348, 1661
AclWI GGATC 7 cut(s) 574, 722, 931, 1047, 1101, 1114, 1216
AcoI YGGCCR 1 cut(s) 297
AcsI RAATTY 3 cut(s) 13, 1204, 1332
AcuI CTGAAG 3 cut(s) 633, 721, 1709
AfaI GTAC 4 cut(s) 490, 892, 971, 1159
AfiI CCNNNNNNNGG 4 cut(s) 447, 462, 627, 1646
AgsI TTSAA 8 cut(s) 67, 131, 383, 599, 768, 966, 1270, 1724
AhlI ACTAGT 2 cut(s) 491, 1700
AjnI CCWGG 4 cut(s) 484, 612, 874, 955
AjuI GAANNNNNNNTTGG 4 cut(s) 748, 780, 1537, 1569
AluBI AGCT 9 cut(s) 31, 122, 144, 585, 627, 653, 1195, 1735, 1765
AluI AGCT 9 cut(s) 31, 122, 144, 585, 627, 653, 1195, 1735, 1765
Alw21I GWGCWC 2 cut(s) 167, 587
Alw26I GTCTC 2 cut(s) 1395, 1592
Alw44I GTGCAC 1 cut(s) 163
AlwI GGATC 7 cut(s) 574, 722, 931, 1047, 1101, 1114, 1216
AoxI GGCC 8 cut(s) 297, 433, 453, 713, 752, 809, 827, 1386
ApaLI GTGCAC 1 cut(s) 163
ApeKI GCWGC 1 cut(s) 507
ApoI RAATTY 3 cut(s) 13, 1204, 1332
ArsI GACNNNNNNTTYG 2 cut(s) 1414, 1446
AseI ATTAAT 1 cut(s) 1082
Asp700I GAANNNNTTC 2 cut(s) 62, 1204
AspLEI GCGC 2 cut(s) 1265, 1436
AspS9I GGNCC 6 cut(s) 214, 434, 454, 788, 872, 1386
AsuHPI GGTGA 6 cut(s) 342, 709, 876, 897, 1199, 1592
AvaII GGWCC 3 cut(s) 214, 788, 872
AxyI CCTNAGG 1 cut(s) 1226
BaeGI GKGCMC 1 cut(s) 167
BamHI GGATCC 1 cut(s) 1106
BanII GRGCYC 1 cut(s) 587
BarI GAAGNNNNNNTAC 2 cut(s) 1719, 1751
BbsI GAAGAC 1 cut(s) 432
Bbv12I GWGCWC 2 cut(s) 167, 587
BbvCI CCTCAGC 1 cut(s) 123
BbvI GCAGC 1 cut(s) 494
BccI CCATC 7 cut(s) 2, 43, 249, 526, 533, 735, 1440
BcgI CGANNNNNNTGC 2 cut(s) 200, 234
BciT130I CCWGG 4 cut(s) 486, 614, 876, 957
BciVI GTATCC 1 cut(s) 1082
BcoDI GTCTC 2 cut(s) 1395, 1592
BcuI ACTAGT 2 cut(s) 491, 1700
BfuAI ACCTGC 2 cut(s) 202, 1558
BfuI GTATCC 1 cut(s) 1082
BglII AGATCT 1 cut(s) 305
BisI GCNGC 1 cut(s) 508
BlsI GCNGC 1 cut(s) 509
BmcAI AGTACT 1 cut(s) 892
Bme1390I CCNGG 4 cut(s) 486, 614, 876, 957
Bme18I GGWCC 3 cut(s) 214, 788, 872
BmgT120I GGNCC 6 cut(s) 214, 434, 454, 788, 872, 1386
BmiI GGNNCC 2 cut(s) 159, 1108
BmrFI CCNGG 4 cut(s) 486, 614, 876, 957
BmsI GCATC 2 cut(s) 938, 1362
BpiI GAAGAC 1 cut(s) 432
BpmI CTGGAG 2 cut(s) 339, 1402
Bpu10I CCTNAGC 2 cut(s) 123, 1356
BpuEI CTTGAG 1 cut(s) 808
BsaBI GATNNNNATC 1 cut(s) 928
BsaI GGTCTC 2 cut(s) 1395, 1592
BsaJI CCNNGG 3 cut(s) 956, 1093, 1609
BsaXI ACNNNNNCTCC 8 cut(s) 111, 141, 505, 535, 667, 697, 1655, 1685
Bsc4I CCNNNNNNNGG 4 cut(s) 447, 462, 627, 1646
Bse1I ACTGG 3 cut(s) 1385, 1405, 1640
Bse21I CCTNAGG 1 cut(s) 1226
Bse8I GATNNNNATC 1 cut(s) 928
BseBI CCWGG 4 cut(s) 486, 614, 876, 957
BseDI CCNNGG 3 cut(s) 956, 1093, 1609
BseGI GGATG 6 cut(s) 241, 337, 525, 929, 1451, 1522
BseJI GATNNNNATC 1 cut(s) 928
BseLI CCNNNNNNNGG 4 cut(s) 447, 462, 627, 1646
BseMII CTCAG 7 cut(s) 75, 114, 162, 198, 798, 1025, 1752
BseNI ACTGG 3 cut(s) 1385, 1405, 1640
BseRI GAGGAG 2 cut(s) 132, 1745
BseSI GKGCMC 1 cut(s) 167
BseXI GCAGC 1 cut(s) 494
BsgI GTGCAG 1 cut(s) 281
Bsh1236I CGCG 2 cut(s) 1265, 1434
BshFI GGCC 8 cut(s) 299, 435, 455, 715, 754, 811, 829, 1388
BsiHKAI GWGCWC 2 cut(s) 167, 587
BsiSI CCGG 1 cut(s) 300
BslI CCNNNNNNNGG 4 cut(s) 447, 462, 627, 1646
BsmAI GTCTC 2 cut(s) 1395, 1592
BsmI GAATGC 2 cut(s) 957, 961
BsnI GGCC 8 cut(s) 299, 435, 455, 715, 754, 811, 829, 1388
Bso31I GGTCTC 2 cut(s) 1395, 1592
Bsp1286I GDGCHC 2 cut(s) 167, 587
BspACI CCGC 3 cut(s) 501, 1348, 1661
BspANI GGCC 8 cut(s) 299, 435, 455, 715, 754, 811, 829, 1388
BspCNI CTCAG 7 cut(s) 76, 115, 161, 199, 797, 1026, 1753
BspFNI CGCG 2 cut(s) 1265, 1434
BspLI GGNNCC 2 cut(s) 159, 1108
BspMI ACCTGC 2 cut(s) 202, 1558
BspPI GGATC 7 cut(s) 574, 722, 931, 1047, 1101, 1114, 1216
BspQI GCTCTTC 1 cut(s) 575
BspTNI GGTCTC 2 cut(s) 1395, 1592
BsrBI CCGCTC 1 cut(s) 1350
BsrI ACTGG 3 cut(s) 1385, 1405, 1640
BssECI CCNNGG 3 cut(s) 956, 1093, 1609
BssT1I CCWWGG 1 cut(s) 1093
Bst2UI CCWGG 4 cut(s) 486, 614, 876, 957
Bst4CI ACNGT 4 cut(s) 162, 895, 1015, 1596
Bst6I CTCTTC 2 cut(s) 575, 1069
BstC8I GCNNGC 4 cut(s) 29, 629, 985, 989
BstDSI CCRYGG 1 cut(s) 1609
BstF5I GGATG 6 cut(s) 241, 337, 525, 929, 1451, 1522
BstFNI CGCG 2 cut(s) 1265, 1434
BstHHI GCGC 2 cut(s) 1265, 1436
BstMAI GTCTC 2 cut(s) 1395, 1592
BstMWI GCNNNNNNNGC 2 cut(s) 507, 926
BstNI CCWGG 4 cut(s) 486, 614, 876, 957
BstNSI RCATGY 2 cut(s) 554, 1126
BstSCI CCNGG 4 cut(s) 484, 612, 874, 955
BstSLI GKGCMC 1 cut(s) 167
BstUI CGCG 2 cut(s) 1265, 1434
BstV1I GCAGC 1 cut(s) 494
BstV2I GAAGAC 1 cut(s) 432
BstX2I RGATCY 5 cut(s) 305, 566, 923, 1106, 1221
BstYI RGATCY 5 cut(s) 305, 566, 923, 1106, 1221
Bsu36I CCTNAGG 1 cut(s) 1226
BsuI GTATCC 1 cut(s) 1082
BsuRI GGCC 8 cut(s) 299, 435, 455, 715, 754, 811, 829, 1388
BtgI CCRYGG 1 cut(s) 1609
BtsCI GGATG 6 cut(s) 241, 337, 525, 929, 1451, 1522
BtsIMutI CAGTG 2 cut(s) 204, 688
BveI ACCTGC 2 cut(s) 202, 1558
Cac8I GCNNGC 4 cut(s) 29, 629, 985, 989
CfoI GCGC 2 cut(s) 1265, 1436
Cfr13I GGNCC 6 cut(s) 214, 434, 454, 788, 872, 1386
Csp6I GTAC 4 cut(s) 489, 891, 970, 1158
CviQI GTAC 4 cut(s) 489, 891, 970, 1158
DraI TTTAAA 2 cut(s) 474, 1323
EaeI YGGCCR 1 cut(s) 297
Eam1104I CTCTTC 2 cut(s) 575, 1069
EarI CTCTTC 2 cut(s) 575, 1069
EciI GGCGGA 1 cut(s) 1676
Ecl136II GAGCTC 1 cut(s) 585
Eco130I CCWWGG 1 cut(s) 1093
Eco147I AGGCCT 1 cut(s) 811
Eco24I GRGCYC 1 cut(s) 587
Eco31I GGTCTC 2 cut(s) 1395, 1592
Eco47I GGWCC 3 cut(s) 214, 788, 872
Eco53kI GAGCTC 1 cut(s) 585
Eco57I CTGAAG 3 cut(s) 633, 721, 1709
Eco81I CCTNAGG 1 cut(s) 1226
EcoICRI GAGCTC 1 cut(s) 585
EcoO109I RGGNCCY 1 cut(s) 1386
EcoRI GAATTC 2 cut(s) 13, 1204
EcoRII CCWGG 4 cut(s) 484, 612, 874, 955
EcoT14I CCWWGG 1 cut(s) 1093
EcoT38I GRGCYC 1 cut(s) 587
ErhI CCWWGG 1 cut(s) 1093
FalI AAGNNNNNCTT 2 cut(s) 1451, 1483
FblI GTMKAC 1 cut(s) 220
Fnu4HI GCNGC 1 cut(s) 508
FokI GGATG 6 cut(s) 228, 344, 512, 916, 1458, 1529
FriOI GRGCYC 1 cut(s) 587
Fsp4HI GCNGC 1 cut(s) 508
GlaI GCGC 2 cut(s) 1264, 1435
GluI GCNGC 1 cut(s) 508
GsuI CTGGAG 2 cut(s) 339, 1402
HaeIII GGCC 8 cut(s) 299, 435, 455, 715, 754, 811, 829, 1388
HapII CCGG 1 cut(s) 300
HhaI GCGC 2 cut(s) 1265, 1436
Hin6I GCGC 2 cut(s) 1263, 1434
HinP1I GCGC 2 cut(s) 1263, 1434
HincII GTYRAC 1 cut(s) 221
HindII GTYRAC 1 cut(s) 221
HinfI GANTC 6 cut(s) 232, 249, 678, 881, 1616, 1670
HpaII CCGG 1 cut(s) 300
HphI GGTGA 6 cut(s) 342, 709, 876, 897, 1199, 1592
Hpy166II GTNNAC 3 cut(s) 165, 221, 1031
Hpy188III TCNNGA 6 cut(s) 55, 73, 236, 383, 1173, 1369
Hpy8I GTNNAC 3 cut(s) 165, 221, 1031
Hpy99I CGWCG 3 cut(s) 222, 225, 1545
HpyAV CCTTC 5 cut(s) 657, 1051, 1174, 1194, 1577
HpyCH4III ACNGT 4 cut(s) 162, 895, 1015, 1596
HpyCH4IV ACGT 2 cut(s) 1426, 1540
HpyCH4V TGCA 9 cut(s) 165, 262, 554, 929, 983, 1132, 1375, 1511, 1525
HpyF10VI GCNNNNNNNGC 2 cut(s) 507, 926
HpySE526I ACGT 2 cut(s) 1426, 1540
HspAI GCGC 2 cut(s) 1263, 1434
LguI GCTCTTC 1 cut(s) 575
LmnI GCTCC 3 cut(s) 119, 1291, 1732
Lsp1109I GCAGC 1 cut(s) 494
LweI GCATC 2 cut(s) 938, 1362
MaeII ACGT 2 cut(s) 1426, 1540
MaeIII GTNAC 9 cut(s) 546, 707, 719, 746, 776, 794, 815, 833, 1676
MbiI CCGCTC 1 cut(s) 1350
MboII GAAGA 8 cut(s) 58, 315, 437, 473, 592, 1086, 1471, 1702
MfeI CAATTG 1 cut(s) 537
MflI RGATCY 5 cut(s) 305, 566, 923, 1106, 1221
MhlI GDGCHC 2 cut(s) 167, 587
MluCI AATT 6 cut(s) 13, 537, 1204, 1324, 1332, 1495
MlyI GAGTC 1 cut(s) 1679
MmeI TCCRAC 1 cut(s) 1615
MroXI GAANNNNTTC 2 cut(s) 62, 1204
MseI TTAA 9 cut(s) 171, 323, 473, 1047, 1082, 1166, 1251, 1322, 1409
MslI CAYNNNNRTG 1 cut(s) 257
MspI CCGG 1 cut(s) 300
MspR9I CCNGG 4 cut(s) 486, 614, 876, 957
MunI CAATTG 1 cut(s) 537
Mva1269I GAATGC 2 cut(s) 957, 961
MvaI CCWGG 4 cut(s) 486, 614, 876, 957
MvnI CGCG 2 cut(s) 1265, 1434
MwoI GCNNNNNNNGC 2 cut(s) 507, 926
NlaIV GGNNCC 2 cut(s) 159, 1108
NmeAIII GCCGAG 1 cut(s) 855
NmuCI GTSAC 8 cut(s) 707, 719, 746, 776, 794, 815, 833, 1676
NspI RCATGY 2 cut(s) 554, 1126
PaqCI CACCTGC 1 cut(s) 1558
PceI AGGCCT 1 cut(s) 811
PciSI GCTCTTC 1 cut(s) 575
PctI GAATGC 2 cut(s) 957, 961
PdmI GAANNNNTTC 2 cut(s) 62, 1204
PfeI GAWTC 5 cut(s) 232, 249, 678, 881, 1616
PflMI CCANNNNNTGG 2 cut(s) 447, 1646
PkrI GCNGC 1 cut(s) 509
PleI GAGTC 1 cut(s) 1678
PpsI GAGTC 1 cut(s) 1678
PshBI ATTAAT 1 cut(s) 1082
Psp124BI GAGCTC 1 cut(s) 587
Psp6I CCWGG 4 cut(s) 484, 612, 874, 955
PspGI CCWGG 4 cut(s) 484, 612, 874, 955
PspN4I GGNNCC 2 cut(s) 159, 1108
PspPI GGNCC 6 cut(s) 214, 434, 454, 788, 872, 1386
PsuI RGATCY 5 cut(s) 305, 566, 923, 1106, 1221
RsaI GTAC 4 cut(s) 490, 892, 971, 1159
RsaNI GTAC 4 cut(s) 489, 891, 970, 1158
RseI CAYNNNNRTG 1 cut(s) 257
SacI GAGCTC 1 cut(s) 587
SalI GTCGAC 1 cut(s) 219
SapI GCTCTTC 1 cut(s) 575
SaqAI TTAA 9 cut(s) 171, 323, 473, 1047, 1082, 1166, 1251, 1322, 1409
SatI GCNGC 1 cut(s) 508
Sau96I GGNCC 6 cut(s) 214, 434, 454, 788, 872, 1386
ScaI AGTACT 1 cut(s) 892
SchI GAGTC 1 cut(s) 1679
ScrFI CCNGG 4 cut(s) 486, 614, 876, 957
SduI GDGCHC 2 cut(s) 167, 587
SfaNI GCATC 2 cut(s) 938, 1362
SgrDI CGTCGACG 1 cut(s) 219
SinI GGWCC 3 cut(s) 214, 788, 872
SmiI ATTTAAAT 1 cut(s) 1323
SmiMI CAYNNNNRTG 1 cut(s) 257
SmlI CTYRAG 1 cut(s) 823
SmoI CTYRAG 1 cut(s) 823
SpeI ACTAGT 2 cut(s) 491, 1700
Sse9I AATT 6 cut(s) 13, 537, 1204, 1324, 1332, 1495
SseBI AGGCCT 1 cut(s) 811
SsiI CCGC 3 cut(s) 501, 1348, 1661
SspI AATATT 1 cut(s) 1569
SstI GAGCTC 1 cut(s) 587
StuI AGGCCT 1 cut(s) 811
StyD4I CCNGG 4 cut(s) 484, 612, 874, 955
StyI CCWWGG 1 cut(s) 1093
SwaI ATTTAAAT 1 cut(s) 1323
TaaI ACNGT 4 cut(s) 162, 895, 1015, 1596
TaiI ACGT 2 cut(s) 1429, 1543
TaqI TCGA 7 cut(s) 220, 247, 1300, 1330, 1368, 1543, 1564
TasI AATT 6 cut(s) 13, 537, 1204, 1324, 1332, 1495
TatI WGTACW 2 cut(s) 890, 1157
TfiI GAWTC 5 cut(s) 232, 249, 678, 881, 1616
Tru1I TTAA 9 cut(s) 171, 323, 473, 1047, 1082, 1166, 1251, 1322, 1409
Tru9I TTAA 9 cut(s) 171, 323, 473, 1047, 1082, 1166, 1251, 1322, 1409
TscAI CASTG 2 cut(s) 211, 688
TseFI GTSAC 8 cut(s) 707, 719, 746, 776, 794, 815, 833, 1676
TseI GCWGC 1 cut(s) 507
Tsp45I GTSAC 8 cut(s) 707, 719, 746, 776, 794, 815, 833, 1676
TspDTI ATGAA 3 cut(s) 245, 332, 1070
TspGWI ACGGA 3 cut(s) 206, 650, 1598
TspRI CASTG 2 cut(s) 211, 688
Van91I CCANNNNNTGG 2 cut(s) 447, 1646
VneI GTGCAC 1 cut(s) 163
VpaK11BI GGWCC 3 cut(s) 214, 788, 872
VspI ATTAAT 1 cut(s) 1082
XapI RAATTY 3 cut(s) 13, 1204, 1332
XceI RCATGY 2 cut(s) 554, 1126
XcmI CCANNNNNNNNNTGG 1 cut(s) 448
XmiI GTMKAC 1 cut(s) 220
XmnI GAANNNNTTC 2 cut(s) 62, 1204
ZrmI AGTACT 1 cut(s) 892
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.