FvH4_6g01860

Protein CHAPERONE-LIKE PROTEIN OF POR1-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
1028763 .. 1030704
1942 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g01860.t1

Sequence Viewer

Length: 306 bp
ATGGCTTTAGCAATTTCCCATGCTCTTCTCTGCCCCAAACTGCAGTTTCCCCAAAGAAACTTCCGCCCTAAAGCTCCACCCCTGAGTTTCTCACCTCCCAATTTCAGAGCAATTCCGCAGAATAGAAGGATAGTGTTGGCCGCTGCGTCTGCAGCTGGAAGTTCTAATTCGGACAGTGGTTTAAATCCGTATGAGATTCTCGGTGTGAACCCGATTGAGGGGTTTGACAAGGTCAAGGAAACATATAAGAGAAAACACAAGGAGGCCATGAGCAACGGTGACGAAGAATCTGCTGCTACAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

102

Amino Acids

10.98

Weight (kDa)

9.51

Isoelectric Point (pI)

58.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028033)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01860
rosa_multiflora Rmu_sc0000610.1_g000010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 64, 116, 141
AcoI YGGCCR 1 cut(s) 138
AfiI CCNNNNNNNGG 2 cut(s) 217, 218
AluBI AGCT 2 cut(s) 74, 155
AluI AGCT 2 cut(s) 74, 155
AoxI GGCC 2 cut(s) 138, 264
ApeKI GCWGC 3 cut(s) 143, 152, 293
AsuHPI GGTGA 2 cut(s) 84, 290
BbvI GCAGC 3 cut(s) 130, 164, 280
BcgI CGANNNNNNTGC 2 cut(s) 272, 306
BfmI CTRYAG 3 cut(s) 41, 150, 297
BisI GCNGC 4 cut(s) 141, 144, 153, 294
BlsI GCNGC 4 cut(s) 142, 145, 154, 295
Bsc4I CCNNNNNNNGG 2 cut(s) 217, 218
BseLI CCNNNNNNNGG 2 cut(s) 217, 218
BseMII CTCAG 1 cut(s) 74
BseXI GCAGC 3 cut(s) 130, 164, 280
BshFI GGCC 2 cut(s) 140, 266
BslI CCNNNNNNNGG 2 cut(s) 217, 218
BsnI GGCC 2 cut(s) 140, 266
BspACI CCGC 3 cut(s) 64, 116, 141
BspANI GGCC 2 cut(s) 140, 266
BspCNI CTCAG 1 cut(s) 75
BspMAI CTGCAG 2 cut(s) 45, 154
BspQI GCTCTTC 1 cut(s) 30
Bst4CI ACNGT 3 cut(s) 176, 278, 301
Bst6I CTCTTC 1 cut(s) 30
BstDEI CTNAG 1 cut(s) 83
BstMWI GCNNNNNNNGC 2 cut(s) 149, 152
BstSFI CTRYAG 3 cut(s) 41, 150, 297
BstV1I GCAGC 3 cut(s) 130, 164, 280
BsuRI GGCC 2 cut(s) 140, 266
BtsIMutI CAGTG 1 cut(s) 181
CseI GACGC 1 cut(s) 135
CviAII CATG 2 cut(s) 20, 268
CviJI RGCY 5 cut(s) 5, 74, 140, 155, 266
CviKI_1 RGCY 5 cut(s) 5, 74, 140, 155, 266
DdeI CTNAG 1 cut(s) 83
DraI TTTAAA 1 cut(s) 183
EaeI YGGCCR 1 cut(s) 138
Eam1104I CTCTTC 1 cut(s) 30
EarI CTCTTC 1 cut(s) 30
EciI GGCGGA 1 cut(s) 53
FaeI CATG 2 cut(s) 23, 271
FaiI YATR 5 cut(s) 21, 192, 244, 246, 269
FatI CATG 2 cut(s) 19, 267
Fnu4HI GCNGC 4 cut(s) 141, 144, 153, 294
Fsp4HI GCNGC 4 cut(s) 141, 144, 153, 294
GluI GCNGC 4 cut(s) 141, 144, 153, 294
HaeIII GGCC 2 cut(s) 140, 266
HgaI GACGC 1 cut(s) 135
Hin1II CATG 2 cut(s) 23, 271
HinfI GANTC 2 cut(s) 196, 287
HphI GGTGA 2 cut(s) 84, 290
Hpy166II GTNNAC 1 cut(s) 208
Hpy188I TCNGA 2 cut(s) 107, 172
Hpy8I GTNNAC 1 cut(s) 208
HpyAV CCTTC 1 cut(s) 120
HpyCH4III ACNGT 3 cut(s) 176, 278, 301
HpyCH4V TGCA 2 cut(s) 43, 152
HpyF10VI GCNNNNNNNGC 2 cut(s) 149, 152
HpyF3I CTNAG 1 cut(s) 83
Hsp92II CATG 2 cut(s) 23, 271
LguI GCTCTTC 1 cut(s) 30
LmnI GCTCC 1 cut(s) 79
LpnPI CCDG 2 cut(s) 95, 141
Lsp1109I GCAGC 3 cut(s) 130, 164, 280
MaeIII GTNAC 1 cut(s) 278
MboII GAAGA 2 cut(s) 17, 296
MluCI AATT 4 cut(s) 12, 100, 111, 166
MnlI CCTC 3 cut(s) 105, 211, 256
MseI TTAA 1 cut(s) 182
MspA1I CMGCKG 2 cut(s) 143, 155
MwoI GCNNNNNNNGC 2 cut(s) 149, 152
NlaIII CATG 2 cut(s) 23, 271
NmuCI GTSAC 1 cut(s) 278
PciSI GCTCTTC 1 cut(s) 30
PfeI GAWTC 2 cut(s) 196, 287
PflFI GACNNNGTC 1 cut(s) 230
PkrI GCNGC 4 cut(s) 142, 145, 154, 295
PstI CTGCAG 2 cut(s) 45, 154
PsyI GACNNNGTC 1 cut(s) 230
PvuII CAGCTG 1 cut(s) 155
SapI GCTCTTC 1 cut(s) 30
SaqAI TTAA 1 cut(s) 182
SatI GCNGC 4 cut(s) 141, 144, 153, 294
SetI ASST 4 cut(s) 76, 97, 157, 234
SfcI CTRYAG 3 cut(s) 41, 150, 297
SgeI CNNG 9 cut(s) 32, 94, 168, 212, 223, 241, 247, 271, 280
Sse9I AATT 4 cut(s) 12, 100, 111, 166
SsiI CCGC 3 cut(s) 64, 116, 141
TaaI ACNGT 3 cut(s) 176, 278, 301
TasI AATT 4 cut(s) 12, 100, 111, 166
TauI GCSGC 1 cut(s) 143
TfiI GAWTC 2 cut(s) 196, 287
Tru1I TTAA 1 cut(s) 182
Tru9I TTAA 1 cut(s) 182
TscAI CASTG 1 cut(s) 181
TseFI GTSAC 1 cut(s) 278
TseI GCWGC 3 cut(s) 143, 152, 293
Tsp45I GTSAC 1 cut(s) 278
TspGWI ACGGA 1 cut(s) 177
TspRI CASTG 1 cut(s) 181
Tth111I GACNNNGTC 1 cut(s) 230
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.