FvH4_7g22270
HSP70 Family

Heat shock cognate 70 kDa

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0028131
Physical Location & Seq
Forward (+)
17574837 .. 17575817
981 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g22270.t1

Sequence Viewer

Length: 396 bp
ATGACTCCATCTTATGTTGCTTTCACTGATACTGAACGATTGATAGGTGATGCAGCATATAACCAAGTCATCAGAAACCCTGCAAACTCAATCTTTGATGCAAAAAGGTTGATTGGTAGAAGATTCACTGATCCAGTTGTACAGAACGATATGAAGCTCTGGCCATTCAAGGTCTTTAATGGTCCTGCTGACAAGCCCATGATTGCGGTTACCCAAAAGGGTGAGGAAAAACAGTTTGCGGCTGAAGAAATCTCATCCATGGTTCTTGGAAAGATGCGGGAGATTGCTGAGGCCTTTCTAGGATCAACTGTGAGGAATGCAGTTATAACTGTCCCTGCTTACTTTAATGACTCACAGCGTCAGGCTACTAATAATGCGCTGTCGCTGCTGGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 ko04010 ko04141 ko04144 ko04213 ko04612 ko04915 ko05134 ko05145 ko05162 ko05164 ko05169 map03040 map04010 map04141 map04144 map04213 map04612 map04915 map05134 map05145 map05162 map05164 map05169
Pfam Domains
Protein Families
HSP70

Protein Analysis

132

Amino Acids

14.56

Weight (kDa)

7.99

Isoelectric Point (pI)

37.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 1 - 127 1.5e-49 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0028131)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g22270
pyrus_communis pycom15g13470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 326
AciI CCGC 3 cut(s) 206, 239, 277
AclWI GGATC 2 cut(s) 125, 310
AcoI YGGCCR 1 cut(s) 161
AcuI CTGAAG 1 cut(s) 264
AfaI GTAC 1 cut(s) 141
AgsI TTSAA 1 cut(s) 169
AluBI AGCT 1 cut(s) 157
AluI AGCT 1 cut(s) 157
AlwI GGATC 2 cut(s) 125, 310
AoxI GGCC 3 cut(s) 161, 291, 390
ApeKI GCWGC 2 cut(s) 53, 385
AspLEI GCGC 1 cut(s) 379
AspS9I GGNCC 1 cut(s) 182
AsuHPI GGTGA 2 cut(s) 59, 233
AvaII GGWCC 1 cut(s) 182
BalI TGGCCA 1 cut(s) 163
BbvCI CCTCAGC 1 cut(s) 288
BbvI GCAGC 2 cut(s) 65, 372
BccI CCATC 1 cut(s) 16
BfaI CTAG 1 cut(s) 299
BisI GCNGC 3 cut(s) 54, 240, 386
BlsI GCNGC 3 cut(s) 55, 241, 387
Bme18I GGWCC 1 cut(s) 182
BmgT120I GGNCC 1 cut(s) 182
BmsI GCATC 3 cut(s) 40, 88, 264
Bpu10I CCTNAGC 1 cut(s) 288
BsaJI CCNNGG 1 cut(s) 258
Bse1I ACTGG 1 cut(s) 134
BseDI CCNNGG 1 cut(s) 258
BseGI GGATG 1 cut(s) 254
BseMII CTCAG 1 cut(s) 279
BseNI ACTGG 1 cut(s) 134
BseXI GCAGC 2 cut(s) 65, 372
BshFI GGCC 3 cut(s) 163, 293, 392
BslFI GGGAC 1 cut(s) 317
BsmFI GGGAC 1 cut(s) 317
BsmI GAATGC 1 cut(s) 322
BsnI GGCC 3 cut(s) 163, 293, 392
Bsp1407I TGTACA 1 cut(s) 139
Bsp143I GATC 2 cut(s) 130, 302
Bsp19I CCATGG 1 cut(s) 258
BspACI CCGC 3 cut(s) 206, 239, 277
BspANI GGCC 3 cut(s) 163, 293, 392
BspCNI CTCAG 1 cut(s) 280
BspPI GGATC 2 cut(s) 125, 310
BsrGI TGTACA 1 cut(s) 139
BsrI ACTGG 1 cut(s) 134
BssECI CCNNGG 1 cut(s) 258
BssMI GATC 2 cut(s) 130, 302
BssT1I CCWWGG 1 cut(s) 258
Bst4CI ACNGT 3 cut(s) 234, 310, 331
BstAUI TGTACA 1 cut(s) 139
BstC8I GCNNGC 1 cut(s) 390
BstDEI CTNAG 1 cut(s) 288
BstDSI CCRYGG 1 cut(s) 258
BstEII GGTNACC 1 cut(s) 208
BstF5I GGATG 1 cut(s) 254
BstHHI GCGC 1 cut(s) 379
BstKTI GATC 2 cut(s) 133, 305
BstMBI GATC 2 cut(s) 130, 302
BstMWI GCNNNNNNNGC 1 cut(s) 385
BstPI GGTNACC 1 cut(s) 208
BstV1I GCAGC 2 cut(s) 65, 372
BsuRI GGCC 3 cut(s) 163, 293, 392
BtgI CCRYGG 1 cut(s) 258
BtsCI GGATG 1 cut(s) 254
BtsIMutI CAGTG 2 cut(s) 24, 126
Cac8I GCNNGC 1 cut(s) 390
CfoI GCGC 1 cut(s) 379
Cfr13I GGNCC 1 cut(s) 182
CseI GACGC 1 cut(s) 347
Csp6I GTAC 1 cut(s) 140
CviAII CATG 2 cut(s) 199, 259
CviJI RGCY 7 cut(s) 157, 163, 196, 242, 293, 365, 392
CviKI_1 RGCY 7 cut(s) 157, 163, 196, 242, 293, 365, 392
CviQI GTAC 1 cut(s) 140
DdeI CTNAG 1 cut(s) 288
DpnI GATC 2 cut(s) 132, 304
DpnII GATC 2 cut(s) 130, 302
EaeI YGGCCR 1 cut(s) 161
Eco130I CCWWGG 1 cut(s) 258
Eco147I AGGCCT 1 cut(s) 293
Eco47I GGWCC 1 cut(s) 182
Eco57I CTGAAG 1 cut(s) 264
Eco91I GGTNACC 1 cut(s) 208
EcoO65I GGTNACC 1 cut(s) 208
EcoT14I CCWWGG 1 cut(s) 258
ErhI CCWWGG 1 cut(s) 258
FaeI CATG 2 cut(s) 202, 262
FaiI YATR 7 cut(s) 15, 58, 60, 152, 200, 260, 326
FaqI GGGAC 1 cut(s) 317
FatI CATG 2 cut(s) 198, 258
FauI CCCGC 1 cut(s) 270
Fnu4HI GCNGC 3 cut(s) 54, 240, 386
FokI GGATG 1 cut(s) 241
Fsp4HI GCNGC 3 cut(s) 54, 240, 386
FspBI CTAG 1 cut(s) 299
GlaI GCGC 1 cut(s) 378
GluI GCNGC 3 cut(s) 54, 240, 386
HaeIII GGCC 3 cut(s) 163, 293, 392
HgaI GACGC 1 cut(s) 347
HhaI GCGC 1 cut(s) 379
Hin1II CATG 2 cut(s) 202, 262
Hin6I GCGC 1 cut(s) 377
HinP1I GCGC 1 cut(s) 377
HinfI GANTC 3 cut(s) 4, 123, 350
HphI GGTGA 2 cut(s) 59, 233
Hpy188I TCNGA 1 cut(s) 74
HpyCH4III ACNGT 3 cut(s) 234, 310, 331
HpyCH4V TGCA 4 cut(s) 53, 83, 101, 320
HpyF10VI GCNNNNNNNGC 1 cut(s) 385
HpyF3I CTNAG 1 cut(s) 288
Hsp92II CATG 2 cut(s) 202, 262
HspAI GCGC 1 cut(s) 377
Kzo9I GATC 2 cut(s) 130, 302
LpnPI CCDG 7 cut(s) 93, 145, 147, 198, 347, 348, 374
Lsp1109I GCAGC 2 cut(s) 65, 372
LweI GCATC 3 cut(s) 40, 88, 264
MaeI CTAG 1 cut(s) 299
MaeIII GTNAC 1 cut(s) 208
MalI GATC 2 cut(s) 132, 304
MboI GATC 2 cut(s) 130, 302
MboII GAAGA 2 cut(s) 132, 257
MlsI TGGCCA 1 cut(s) 163
MluNI TGGCCA 1 cut(s) 163
MlyI GAGTC 1 cut(s) 344
MnlI CCTC 3 cut(s) 217, 283, 306
Mox20I TGGCCA 1 cut(s) 163
MscI TGGCCA 1 cut(s) 163
MseI TTAA 2 cut(s) 177, 345
Msp20I TGGCCA 1 cut(s) 163
Mva1269I GAATGC 1 cut(s) 322
MwoI GCNNNNNNNGC 1 cut(s) 385
NcoI CCATGG 1 cut(s) 258
NdeII GATC 2 cut(s) 130, 302
NlaIII CATG 2 cut(s) 202, 262
PceI AGGCCT 1 cut(s) 293
PctI GAATGC 1 cut(s) 322
PfeI GAWTC 1 cut(s) 123
PkrI GCNGC 3 cut(s) 55, 241, 387
PleI GAGTC 1 cut(s) 344
PpsI GAGTC 1 cut(s) 344
PsiI TTATAA 1 cut(s) 326
PspEI GGTNACC 1 cut(s) 208
PspPI GGNCC 1 cut(s) 182
RsaI GTAC 1 cut(s) 141
RsaNI GTAC 1 cut(s) 140
SaqAI TTAA 2 cut(s) 177, 345
SatI GCNGC 3 cut(s) 54, 240, 386
Sau3AI GATC 2 cut(s) 130, 302
Sau96I GGNCC 1 cut(s) 182
SchI GAGTC 1 cut(s) 344
SetI ASST 4 cut(s) 49, 110, 159, 174
SfaNI GCATC 3 cut(s) 40, 88, 264
SinI GGWCC 1 cut(s) 182
SseBI AGGCCT 1 cut(s) 293
SsiI CCGC 3 cut(s) 206, 239, 277
SspMI CTAG 1 cut(s) 299
StuI AGGCCT 1 cut(s) 293
StyI CCWWGG 1 cut(s) 258
TaaI ACNGT 3 cut(s) 234, 310, 331
TatI WGTACW 1 cut(s) 139
TauI GCSGC 1 cut(s) 242
TfiI GAWTC 1 cut(s) 123
Tru1I TTAA 2 cut(s) 177, 345
Tru9I TTAA 2 cut(s) 177, 345
TscAI CASTG 2 cut(s) 31, 133
TseI GCWGC 2 cut(s) 53, 385
TspDTI ATGAA 1 cut(s) 167
TspRI CASTG 2 cut(s) 31, 133
VpaK11BI GGWCC 1 cut(s) 182
XspI CTAG 1 cut(s) 299
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.