Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD00G1001700.v1.1 |
| pyrus_communis | pycom16g25470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 347 |
| AflIII | ACRYGT | 1 cut(s) | 466 |
| AgsI | TTSAA | 4 cut(s) | 50, 121, 427, 433 |
| AjnI | CCWGG | 1 cut(s) | 245 |
| AluBI | AGCT | 3 cut(s) | 157, 313, 331 |
| AluI | AGCT | 3 cut(s) | 157, 313, 331 |
| AlwI | GGATC | 1 cut(s) | 347 |
| AoxI | GGCC | 1 cut(s) | 32 |
| AspS9I | GGNCC | 1 cut(s) | 138 |
| AsuHPI | GGTGA | 3 cut(s) | 142, 205, 511 |
| AvaII | GGWCC | 1 cut(s) | 138 |
| BccI | CCATC | 1 cut(s) | 127 |
| BciT130I | CCWGG | 1 cut(s) | 247 |
| BfaI | CTAG | 2 cut(s) | 314, 332 |
| Bme1390I | CCNGG | 1 cut(s) | 247 |
| Bme18I | GGWCC | 1 cut(s) | 138 |
| BmgT120I | GGNCC | 1 cut(s) | 138 |
| BmiI | GGNNCC | 1 cut(s) | 139 |
| BmrFI | CCNGG | 1 cut(s) | 247 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 50, 82 |
| BpmI | CTGGAG | 1 cut(s) | 540 |
| BpuEI | CTTGAG | 1 cut(s) | 360 |
| BsaJI | CCNNGG | 1 cut(s) | 246 |
| Bse1I | ACTGG | 1 cut(s) | 404 |
| BseBI | CCWGG | 1 cut(s) | 247 |
| BseDI | CCNNGG | 1 cut(s) | 246 |
| BseGI | GGATG | 1 cut(s) | 82 |
| BseNI | ACTGG | 1 cut(s) | 404 |
| BseRI | GAGGAG | 1 cut(s) | 458 |
| BshFI | GGCC | 1 cut(s) | 34 |
| BslFI | GGGAC | 2 cut(s) | 151, 331 |
| BsmFI | GGGAC | 2 cut(s) | 151, 331 |
| BsnI | GGCC | 1 cut(s) | 34 |
| Bsp143I | GATC | 1 cut(s) | 339 |
| BspANI | GGCC | 1 cut(s) | 34 |
| BspLI | GGNNCC | 1 cut(s) | 139 |
| BspPI | GGATC | 1 cut(s) | 347 |
| BsrI | ACTGG | 1 cut(s) | 404 |
| BssECI | CCNNGG | 1 cut(s) | 246 |
| BssMI | GATC | 1 cut(s) | 339 |
| Bst2UI | CCWGG | 1 cut(s) | 247 |
| Bst4CI | ACNGT | 2 cut(s) | 346, 481 |
| BstC8I | GCNNGC | 1 cut(s) | 90 |
| BstF5I | GGATG | 1 cut(s) | 82 |
| BstKTI | GATC | 1 cut(s) | 342 |
| BstMBI | GATC | 1 cut(s) | 339 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 60 |
| BstNI | CCWGG | 1 cut(s) | 247 |
| BstNSI | RCATGY | 1 cut(s) | 470 |
| BstSCI | CCNGG | 1 cut(s) | 245 |
| BsuRI | GGCC | 1 cut(s) | 34 |
| BtsCI | GGATG | 1 cut(s) | 82 |
| Cac8I | GCNNGC | 1 cut(s) | 90 |
| Cfr13I | GGNCC | 1 cut(s) | 138 |
| CviAII | CATG | 3 cut(s) | 231, 409, 467 |
| CviJI | RGCY | 9 cut(s) | 34, 54, 157, 169, 185, 313, 331, 403, 518 |
| CviKI_1 | RGCY | 9 cut(s) | 34, 54, 157, 169, 185, 313, 331, 403, 518 |
| DpnI | GATC | 1 cut(s) | 341 |
| DpnII | GATC | 1 cut(s) | 339 |
| Eco32I | GATATC | 1 cut(s) | 277 |
| Eco47I | GGWCC | 1 cut(s) | 138 |
| EcoRII | CCWGG | 1 cut(s) | 245 |
| EcoRV | GATATC | 1 cut(s) | 277 |
| FaeI | CATG | 3 cut(s) | 234, 412, 470 |
| FaiI | YATR | 9 cut(s) | 18, 189, 232, 368, 370, 372, 397, 410, 468 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 488, 520 |
| FaqI | GGGAC | 2 cut(s) | 151, 331 |
| FatI | CATG | 3 cut(s) | 230, 408, 466 |
| FokI | GGATG | 1 cut(s) | 89 |
| FspBI | CTAG | 2 cut(s) | 314, 332 |
| GsuI | CTGGAG | 1 cut(s) | 540 |
| HaeIII | GGCC | 1 cut(s) | 34 |
| Hin1II | CATG | 3 cut(s) | 234, 412, 470 |
| HinfI | GANTC | 2 cut(s) | 108, 286 |
| HphI | GGTGA | 3 cut(s) | 142, 205, 511 |
| Hpy166II | GTNNAC | 1 cut(s) | 502 |
| Hpy188I | TCNGA | 2 cut(s) | 281, 514 |
| Hpy188III | TCNNGA | 1 cut(s) | 325 |
| Hpy8I | GTNNAC | 1 cut(s) | 502 |
| HpyAV | CCTTC | 5 cut(s) | 44, 121, 175, 209, 490 |
| HpyCH4III | ACNGT | 2 cut(s) | 346, 481 |
| HpyCH4V | TGCA | 1 cut(s) | 353 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 60 |
| Hsp92II | CATG | 3 cut(s) | 234, 412, 470 |
| Kzo9I | GATC | 1 cut(s) | 339 |
| LpnPI | CCDG | 6 cut(s) | 16, 232, 243, 259, 385, 504 |
| MaeI | CTAG | 2 cut(s) | 314, 332 |
| MaeIII | GTNAC | 3 cut(s) | 6, 379, 413 |
| MalI | GATC | 1 cut(s) | 341 |
| MboI | GATC | 1 cut(s) | 339 |
| MfeI | CAATTG | 1 cut(s) | 534 |
| MluCI | AATT | 4 cut(s) | 19, 199, 297, 534 |
| MlyI | GAGTC | 2 cut(s) | 117, 280 |
| MnlI | CCTC | 4 cut(s) | 184, 189, 436, 508 |
| MseI | TTAA | 1 cut(s) | 300 |
| MspR9I | CCNGG | 1 cut(s) | 247 |
| MunI | CAATTG | 1 cut(s) | 534 |
| MvaI | CCWGG | 1 cut(s) | 247 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 60 |
| NdeII | GATC | 1 cut(s) | 339 |
| NlaIII | CATG | 3 cut(s) | 234, 412, 470 |
| NlaIV | GGNNCC | 1 cut(s) | 139 |
| NspI | RCATGY | 1 cut(s) | 470 |
| PciI | ACATGT | 1 cut(s) | 466 |
| PleI | GAGTC | 2 cut(s) | 116, 280 |
| PpsI | GAGTC | 2 cut(s) | 116, 280 |
| PscI | ACATGT | 1 cut(s) | 466 |
| Psp6I | CCWGG | 1 cut(s) | 245 |
| PspGI | CCWGG | 1 cut(s) | 245 |
| PspN4I | GGNNCC | 1 cut(s) | 139 |
| PspPI | GGNCC | 1 cut(s) | 138 |
| SaqAI | TTAA | 1 cut(s) | 300 |
| Sau3AI | GATC | 1 cut(s) | 339 |
| Sau96I | GGNCC | 1 cut(s) | 138 |
| SchI | GAGTC | 2 cut(s) | 117, 280 |
| ScrFI | CCNGG | 1 cut(s) | 247 |
| SetI | ASST | 8 cut(s) | 103, 132, 159, 195, 262, 315, 333, 501 |
| SinI | GGWCC | 1 cut(s) | 138 |
| SmlI | CTYRAG | 1 cut(s) | 375 |
| SmoI | CTYRAG | 1 cut(s) | 375 |
| Sse9I | AATT | 4 cut(s) | 19, 199, 297, 534 |
| SspI | AATATT | 1 cut(s) | 175 |
| SspMI | CTAG | 2 cut(s) | 314, 332 |
| StyD4I | CCNGG | 1 cut(s) | 245 |
| TaaI | ACNGT | 2 cut(s) | 346, 481 |
| TaqI | TCGA | 1 cut(s) | 324 |
| TasI | AATT | 4 cut(s) | 19, 199, 297, 534 |
| Tru1I | TTAA | 1 cut(s) | 300 |
| Tru9I | TTAA | 1 cut(s) | 300 |
| TspDTI | ATGAA | 5 cut(s) | 351, 409, 474, 498, 515 |
| VpaK11BI | GGWCC | 1 cut(s) | 138 |
| XceI | RCATGY | 1 cut(s) | 470 |
| XspI | CTAG | 2 cut(s) | 314, 332 |