MD00G1047300.v1.1

The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Forward (+)
8798786 .. 8801756
2971 bp
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UTR
Exon/CDS
Intron
MD00G1047300.v1.1.491

Sequence Viewer

Length: 141 bp
ATGTTGGGAATTTTAAGGCAAAAAGTGGGAGCTGGAAGCTCATCAGCTATGATTTTGGGGCAGAGGATCCGCCCTGCCACATCGGCAATGAGGGGTTGCGCATCTTTGGCGAAAGAGGGCTTGGTTGTTTTGGCATGTTGA

Protein Analysis

47

Amino Acids

4.67

Weight (kDa)

10.86

Isoelectric Point (pI)

41.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0028756)

Species Orthologous Gene IDs
malus_domestica MD00G1047300.v1.1
pyrus_communis pycom05g24000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 100
AciI CCGC 1 cut(s) 70
AclWI GGATC 2 cut(s) 61, 74
AcsI RAATTY 1 cut(s) 9
AjuI GAANNNNNNNTTGG 2 cut(s) 104, 136
AluBI AGCT 3 cut(s) 32, 39, 47
AluI AGCT 3 cut(s) 32, 39, 47
AlwI GGATC 2 cut(s) 61, 74
ApoI RAATTY 1 cut(s) 9
AspLEI GCGC 1 cut(s) 101
BamHI GGATCC 1 cut(s) 66
BglI GCCNNNNNGGC 1 cut(s) 83
BmiI GGNNCC 1 cut(s) 68
BmsI GCATC 1 cut(s) 110
Bse3DI GCAATG 1 cut(s) 93
BseMI GCAATG 1 cut(s) 93
Bsp143I GATC 1 cut(s) 66
BspACI CCGC 1 cut(s) 70
BspLI GGNNCC 1 cut(s) 68
BspPI GGATC 2 cut(s) 61, 74
BsrDI GCAATG 1 cut(s) 93
BssMI GATC 1 cut(s) 66
BstHHI GCGC 1 cut(s) 101
BstKTI GATC 1 cut(s) 69
BstMBI GATC 1 cut(s) 66
BstMWI GCNNNNNNNGC 2 cut(s) 83, 107
BstNSI RCATGY 1 cut(s) 138
BstX2I RGATCY 1 cut(s) 66
BstYI RGATCY 1 cut(s) 66
CfoI GCGC 1 cut(s) 101
CviAII CATG 1 cut(s) 135
CviJI RGCY 4 cut(s) 32, 39, 47, 120
CviKI_1 RGCY 4 cut(s) 32, 39, 47, 120
DpnI GATC 1 cut(s) 68
DpnII GATC 1 cut(s) 66
EciI GGCGGA 1 cut(s) 59
FaeI CATG 1 cut(s) 138
FaiI YATR 2 cut(s) 50, 136
FatI CATG 1 cut(s) 134
FspI TGCGCA 1 cut(s) 100
GlaI GCGC 1 cut(s) 100
HhaI GCGC 1 cut(s) 101
Hin1II CATG 1 cut(s) 138
Hin6I GCGC 1 cut(s) 99
HinP1I GCGC 1 cut(s) 99
HpyF10VI GCNNNNNNNGC 2 cut(s) 83, 107
Hsp92II CATG 1 cut(s) 138
HspAI GCGC 1 cut(s) 99
Kzo9I GATC 1 cut(s) 66
LmnI GCTCC 1 cut(s) 29
LpnPI CCDG 2 cut(s) 18, 87
LweI GCATC 1 cut(s) 110
MalI GATC 1 cut(s) 68
MboI GATC 1 cut(s) 66
MflI RGATCY 1 cut(s) 66
MluCI AATT 1 cut(s) 9
MnlI CCTC 3 cut(s) 57, 84, 109
MseI TTAA 1 cut(s) 14
MwoI GCNNNNNNNGC 2 cut(s) 83, 107
NdeII GATC 1 cut(s) 66
NlaIII CATG 1 cut(s) 138
NlaIV GGNNCC 1 cut(s) 68
NsbI TGCGCA 1 cut(s) 100
NspI RCATGY 1 cut(s) 138
PspN4I GGNNCC 1 cut(s) 68
PsuI RGATCY 1 cut(s) 66
SaqAI TTAA 1 cut(s) 14
Sau3AI GATC 1 cut(s) 66
SetI ASST 3 cut(s) 34, 41, 49
SfaNI GCATC 1 cut(s) 110
SgeI CNNG 3 cut(s) 45, 86, 133
Sse9I AATT 1 cut(s) 9
SsiI CCGC 1 cut(s) 70
TasI AATT 1 cut(s) 9
Tru1I TTAA 1 cut(s) 14
Tru9I TTAA 1 cut(s) 14
XapI RAATTY 1 cut(s) 9
XceI RCATGY 1 cut(s) 138
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.