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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD00G1080200.v1.1 MD02G1031700.v1.1 MD04G1075700.v1.1 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 286 |
| AfaI | GTAC | 1 cut(s) | 284 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 114, 115 |
| AgsI | TTSAA | 1 cut(s) | 166 |
| AoxI | GGCC | 1 cut(s) | 105 |
| AspS9I | GGNCC | 1 cut(s) | 106 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 163, 169, 175, 197, 203, 209, 211, 245 |
| BmgT120I | GGNCC | 1 cut(s) | 106 |
| BmiI | GGNNCC | 1 cut(s) | 108 |
| BmsI | GCATC | 5 cut(s) | 189, 195, 201, 231, 257 |
| Bpu10I | CCTNAGC | 1 cut(s) | 152 |
| Bsa29I | ATCGAT | 1 cut(s) | 195 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 114, 115 |
| BseCI | ATCGAT | 1 cut(s) | 195 |
| BseGI | GGATG | 1 cut(s) | 248 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 114, 115 |
| BshFI | GGCC | 1 cut(s) | 107 |
| BshVI | ATCGAT | 1 cut(s) | 195 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 114, 115 |
| BsnI | GGCC | 1 cut(s) | 107 |
| BspACI | CCGC | 1 cut(s) | 286 |
| BspANI | GGCC | 1 cut(s) | 107 |
| BspDI | ATCGAT | 1 cut(s) | 195 |
| BspLI | GGNNCC | 1 cut(s) | 108 |
| Bst6I | CTCTTC | 2 cut(s) | 47, 50 |
| BstC8I | GCNNGC | 1 cut(s) | 246 |
| BstDEI | CTNAG | 1 cut(s) | 152 |
| BstF5I | GGATG | 1 cut(s) | 248 |
| Bsu15I | ATCGAT | 1 cut(s) | 195 |
| BsuRI | GGCC | 1 cut(s) | 107 |
| BsuTUI | ATCGAT | 1 cut(s) | 195 |
| BtgZI | GCGATG | 1 cut(s) | 44 |
| BtsCI | GGATG | 1 cut(s) | 248 |
| Cac8I | GCNNGC | 1 cut(s) | 246 |
| Cfr13I | GGNCC | 1 cut(s) | 106 |
| ClaI | ATCGAT | 1 cut(s) | 195 |
| Csp6I | GTAC | 1 cut(s) | 283 |
| CviAII | CATG | 4 cut(s) | 114, 275, 280, 290 |
| CviJI | RGCY | 2 cut(s) | 107, 244 |
| CviKI_1 | RGCY | 2 cut(s) | 107, 244 |
| CviQI | GTAC | 1 cut(s) | 283 |
| DdeI | CTNAG | 1 cut(s) | 152 |
| Eam1104I | CTCTTC | 2 cut(s) | 47, 50 |
| EarI | CTCTTC | 2 cut(s) | 47, 50 |
| EcoO109I | RGGNCCY | 1 cut(s) | 106 |
| FaeI | CATG | 4 cut(s) | 117, 278, 283, 293 |
| FaiI | YATR | 5 cut(s) | 115, 132, 276, 281, 291 |
| FatI | CATG | 4 cut(s) | 113, 274, 279, 289 |
| FokI | GGATG | 1 cut(s) | 235 |
| HaeIII | GGCC | 1 cut(s) | 107 |
| Hin1II | CATG | 4 cut(s) | 117, 278, 283, 293 |
| Hpy188I | TCNGA | 1 cut(s) | 233 |
| HpyAV | CCTTC | 2 cut(s) | 10, 17 |
| HpyCH4V | TGCA | 3 cut(s) | 37, 174, 248 |
| HpyF3I | CTNAG | 1 cut(s) | 152 |
| Hsp92II | CATG | 4 cut(s) | 117, 278, 283, 293 |
| LpnPI | CCDG | 2 cut(s) | 62, 286 |
| LweI | GCATC | 5 cut(s) | 189, 195, 201, 231, 257 |
| MboII | GAAGA | 4 cut(s) | 32, 34, 64, 67 |
| MluCI | AATT | 1 cut(s) | 86 |
| MmeI | TCCRAC | 2 cut(s) | 218, 298 |
| MnlI | CCTC | 3 cut(s) | 50, 97, 234 |
| NlaIII | CATG | 4 cut(s) | 117, 278, 283, 293 |
| NlaIV | GGNNCC | 1 cut(s) | 108 |
| PspN4I | GGNNCC | 1 cut(s) | 108 |
| PspPI | GGNCC | 1 cut(s) | 106 |
| RsaI | GTAC | 1 cut(s) | 284 |
| RsaNI | GTAC | 1 cut(s) | 283 |
| Sau96I | GGNCC | 1 cut(s) | 106 |
| SetI | ASST | 4 cut(s) | 28, 42, 158, 340 |
| SfaNI | GCATC | 5 cut(s) | 189, 195, 201, 231, 257 |
| SgeI | CNNG | 9 cut(s) | 61, 126, 183, 257, 273, 287, 292, 302, 313 |
| Sse9I | AATT | 1 cut(s) | 86 |
| SsiI | CCGC | 1 cut(s) | 286 |
| TaqI | TCGA | 2 cut(s) | 195, 225 |
| TasI | AATT | 1 cut(s) | 86 |