MD04G1182700.v1.1

Belongs to the glycosyltransferase 8 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Reverse (-)
27391755 .. 27392559
805 bp
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UTR
Exon/CDS
Intron
MD04G1182700.v1.1.491

Sequence Viewer

Length: 225 bp
ATGCTCGTTCCTCTTCTCTTCCTTCTCGGCCTTCACAATGGCTTTCACCCTCCCGGATATGTACCAGAACAACGAAATTCGCCTTCAATTGGAGGATATGGTACAAAAATCATCATAAATGCTTCTAATCTGTCAGTGGGGGGTGGTTCGAAGCATGTAGATGATTTCGTGAAAAATTTCACACCAACCCTTTCAAAGGTTCGTTGCTTACTGCTCTGGTGTTAG

Protein Analysis

75

Amino Acids

8.04

Weight (kDa)

9.18

Isoelectric Point (pI)

30.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028702)

Species Orthologous Gene IDs
malus_domestica MD04G1182700.v1.1
pyrus_communis pycom04g16100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 76, 175
AfaI GTAC 2 cut(s) 63, 103
AfiI CCNNNNNNNGG 2 cut(s) 89, 196
AgsI TTSAA 2 cut(s) 87, 195
AoxI GGCC 1 cut(s) 28
ApoI RAATTY 2 cut(s) 76, 175
Asp700I GAANNNNTTC 1 cut(s) 176
AsuC2I CCSGG 1 cut(s) 54
AsuHPI GGTGA 1 cut(s) 38
AsuII TTCGAA 1 cut(s) 149
BcnI CCSGG 1 cut(s) 54
Bme1390I CCNGG 1 cut(s) 54
BmrFI CCNGG 1 cut(s) 54
Bpu14I TTCGAA 1 cut(s) 149
BpuMI CCSGG 1 cut(s) 54
Bsc4I CCNNNNNNNGG 2 cut(s) 89, 196
BseLI CCNNNNNNNGG 2 cut(s) 89, 196
BshFI GGCC 1 cut(s) 30
BsiSI CCGG 1 cut(s) 54
BslI CCNNNNNNNGG 2 cut(s) 89, 196
BsnI GGCC 1 cut(s) 30
Bsp119I TTCGAA 1 cut(s) 149
BspANI GGCC 1 cut(s) 30
BspT104I TTCGAA 1 cut(s) 149
Bst6I CTCTTC 2 cut(s) 18, 23
BstBI TTCGAA 1 cut(s) 149
BstENI CCTNNNNNAGG 1 cut(s) 194
BstNSI RCATGY 1 cut(s) 158
BstSCI CCNGG 1 cut(s) 52
BsuRI GGCC 1 cut(s) 30
BtsIMutI CAGTG 1 cut(s) 141
Csp6I GTAC 2 cut(s) 62, 102
CviAII CATG 1 cut(s) 155
CviJI RGCY 2 cut(s) 30, 42
CviKI_1 RGCY 2 cut(s) 30, 42
CviQI GTAC 2 cut(s) 62, 102
Eam1104I CTCTTC 2 cut(s) 18, 23
EarI CTCTTC 2 cut(s) 18, 23
EcoNI CCTNNNNNAGG 1 cut(s) 194
FaeI CATG 1 cut(s) 158
FaiI YATR 4 cut(s) 60, 99, 116, 156
FatI CATG 1 cut(s) 154
HaeIII GGCC 1 cut(s) 30
HapII CCGG 1 cut(s) 54
Hin1II CATG 1 cut(s) 158
HpaII CCGG 1 cut(s) 54
HphI GGTGA 1 cut(s) 38
Hpy188III TCNNGA 1 cut(s) 169
HpyAV CCTTC 3 cut(s) 32, 41, 93
Hsp92II CATG 1 cut(s) 158
LpnPI CCDG 3 cut(s) 67, 78, 202
MboII GAAGA 2 cut(s) 5, 10
MfeI CAATTG 1 cut(s) 87
MluCI AATT 3 cut(s) 76, 87, 175
MnlI CCTC 3 cut(s) 21, 60, 86
MroXI GAANNNNTTC 1 cut(s) 176
MslI CAYNNNNRTG 1 cut(s) 159
MspI CCGG 1 cut(s) 54
MspR9I CCNGG 1 cut(s) 54
MunI CAATTG 1 cut(s) 87
NciI CCSGG 1 cut(s) 54
NlaIII CATG 1 cut(s) 158
NmeAIII GCCGAG 1 cut(s) 6
NspI RCATGY 1 cut(s) 158
NspV TTCGAA 1 cut(s) 149
PdmI GAANNNNTTC 1 cut(s) 176
PfoI TCCNGGA 1 cut(s) 52
RsaI GTAC 2 cut(s) 63, 103
RsaNI GTAC 2 cut(s) 62, 102
RseI CAYNNNNRTG 1 cut(s) 159
ScrFI CCNGG 1 cut(s) 54
SetI ASST 1 cut(s) 201
SfuI TTCGAA 1 cut(s) 149
SgeI CNNG 7 cut(s) 17, 38, 65, 66, 77, 167, 181
SmiMI CAYNNNNRTG 1 cut(s) 159
Sse9I AATT 3 cut(s) 76, 87, 175
StyD4I CCNGG 1 cut(s) 52
TaqI TCGA 1 cut(s) 149
TasI AATT 3 cut(s) 76, 87, 175
TscAI CASTG 1 cut(s) 141
TspRI CASTG 1 cut(s) 141
XagI CCTNNNNNAGG 1 cut(s) 194
XapI RAATTY 2 cut(s) 76, 175
XceI RCATGY 1 cut(s) 158
XmnI GAANNNNTTC 1 cut(s) 176
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.