MD04G1237500.v1.1

translation elongation factor activity

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Reverse (-)
31575307 .. 31587587
12281 bp
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UTR
Exon/CDS
Intron
MD04G1237500.v1.1.491

Sequence Viewer

Length: 219 bp
ATGCTGATGGAGATAGAGATAGAGATAGGAGAGGGAGAGAGGGAGACAGAGGCAGAGCGACAGAGAGAGAAGGAAAGGGAAGAGTGGGGATCTCAGCGCCATTGCTGCAGATCCTTGATCTTCTTCGATCCCATCTTCGTGTTCTTCTCAGCCTCTCACAGTCGCAACATCGCTCGCCCACTCACTCACTCACTCACTACAGAAATTCTGAGATGGTAA

Protein Analysis

73

Amino Acids

8.67

Weight (kDa)

5.33

Isoelectric Point (pI)

79.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028686)

Species Orthologous Gene IDs
malus_domestica MD04G1237500.v1.1
pyrus_communis pycom13g10070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 3 cut(s) 97, 105, 122
AcsI RAATTY 1 cut(s) 204
Alw26I GTCTC 1 cut(s) 38
AlwI GGATC 3 cut(s) 97, 105, 122
ApeKI GCWGC 1 cut(s) 105
ApoI RAATTY 1 cut(s) 204
AspLEI GCGC 1 cut(s) 99
BbvI GCAGC 1 cut(s) 92
BccI CCATC 2 cut(s) 140, 207
BcoDI GTCTC 1 cut(s) 38
BfmI CTRYAG 2 cut(s) 106, 198
BfoI RGCGCY 1 cut(s) 100
BisI GCNGC 1 cut(s) 106
BlsI GCNGC 1 cut(s) 107
Bse3DI GCAATG 1 cut(s) 100
BseMI GCAATG 1 cut(s) 100
BseMII CTCAG 3 cut(s) 107, 162, 200
BseXI GCAGC 1 cut(s) 92
BsmAI GTCTC 1 cut(s) 38
Bsp143I GATC 4 cut(s) 89, 110, 117, 127
BspCNI CTCAG 3 cut(s) 106, 161, 201
BspMAI CTGCAG 1 cut(s) 110
BspPI GGATC 3 cut(s) 97, 105, 122
BsrDI GCAATG 1 cut(s) 100
BssMI GATC 4 cut(s) 89, 110, 117, 127
Bst4CI ACNGT 1 cut(s) 161
Bst6I CTCTTC 1 cut(s) 75
BstC8I GCNNGC 1 cut(s) 175
BstDEI CTNAG 3 cut(s) 93, 148, 209
BstH2I RGCGCY 1 cut(s) 100
BstHHI GCGC 1 cut(s) 99
BstKTI GATC 4 cut(s) 92, 113, 120, 130
BstMAI GTCTC 1 cut(s) 38
BstMBI GATC 4 cut(s) 89, 110, 117, 127
BstMWI GCNNNNNNNGC 1 cut(s) 105
BstSFI CTRYAG 2 cut(s) 106, 198
BstV1I GCAGC 1 cut(s) 92
BstX2I RGATCY 2 cut(s) 89, 110
BstYI RGATCY 2 cut(s) 89, 110
BtgZI GCGATG 1 cut(s) 154
Cac8I GCNNGC 1 cut(s) 175
CfoI GCGC 1 cut(s) 99
CviJI RGCY 1 cut(s) 152
CviKI_1 RGCY 1 cut(s) 152
DdeI CTNAG 3 cut(s) 93, 148, 209
DpnI GATC 4 cut(s) 91, 112, 119, 129
DpnII GATC 4 cut(s) 89, 110, 117, 127
Eam1104I CTCTTC 1 cut(s) 75
EarI CTCTTC 1 cut(s) 75
Fnu4HI GCNGC 1 cut(s) 106
Fsp4HI GCNGC 1 cut(s) 106
GlaI GCGC 1 cut(s) 98
GluI GCNGC 1 cut(s) 106
HaeII RGCGCY 1 cut(s) 100
HhaI GCGC 1 cut(s) 99
Hin6I GCGC 1 cut(s) 97
HinP1I GCGC 1 cut(s) 97
Hpy188I TCNGA 1 cut(s) 210
HpyAV CCTTC 1 cut(s) 64
HpyCH4III ACNGT 1 cut(s) 161
HpyCH4V TGCA 1 cut(s) 108
HpyF10VI GCNNNNNNNGC 1 cut(s) 105
HpyF3I CTNAG 3 cut(s) 93, 148, 209
HspAI GCGC 1 cut(s) 97
Kzo9I GATC 4 cut(s) 89, 110, 117, 127
Lsp1109I GCAGC 1 cut(s) 92
MalI GATC 4 cut(s) 91, 112, 119, 129
MboI GATC 4 cut(s) 89, 110, 117, 127
MboII GAAGA 5 cut(s) 92, 112, 115, 127, 136
MflI RGATCY 2 cut(s) 89, 110
MluCI AATT 1 cut(s) 204
MnlI CCTC 4 cut(s) 25, 33, 43, 163
MslI CAYNNNNRTG 1 cut(s) 137
MwoI GCNNNNNNNGC 1 cut(s) 105
NdeII GATC 4 cut(s) 89, 110, 117, 127
PkrI GCNGC 1 cut(s) 107
PstI CTGCAG 1 cut(s) 110
PsuI RGATCY 2 cut(s) 89, 110
RseI CAYNNNNRTG 1 cut(s) 137
SatI GCNGC 1 cut(s) 106
Sau3AI GATC 4 cut(s) 89, 110, 117, 127
SfcI CTRYAG 2 cut(s) 106, 198
SgeI CNNG 3 cut(s) 127, 151, 186
SmiMI CAYNNNNRTG 1 cut(s) 137
Sse9I AATT 1 cut(s) 204
TaaI ACNGT 1 cut(s) 161
TaqI TCGA 1 cut(s) 126
TasI AATT 1 cut(s) 204
TseI GCWGC 1 cut(s) 105
XapI RAATTY 1 cut(s) 204
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.