MD05G1014700.v1.1

This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP- glucose from Glc-1-P and ATP

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0028819
Physical Location & Seq
Reverse (-)
2726668 .. 2730817
4150 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1014700.v1.1.491

Sequence Viewer

Length: 822 bp
ATGGCGTCCGAGGATGCGTACCTACAACATCTGGTGGCTGGGCACCGAGTCCCAACTCAGGTGTACAATCTGTTAACTCCCCTACAAAACGGATCAACAATAATGAATTCATTTTTAGTTTCGGTTCCAAGTTTGAATATGAGCATCACTGTTCATCCGGCAGACTCAGGATTAAATTTGGCTCAAAAAATTAGTGTTGAAACGGGAGAAGACCTGAACCAATTAGTAATGGTAACACATGGTTATCATATTATGCGTCATATAGAATTAGGAGAAATTCCGGGGATTAAAGATTATAGAGATATAAATATAGGGTCAATGGTTGGTGGAATGTATCCATATCCTCTGTACCCAGCTGAGTCAACAATTAGATACACACTATTTATGGATGTACCAGTAGCTATTGATAGGTTGTCTGTAGAAATGTTTAGCAGTTTGAACGAATGGGCTGTTGAATATTTTGGGACTCCTGCTAGCTTTAGTTTGAGAGACAAAGAGGGTGTGGTGGTGACCCACCCGCAGTCACCCAACAACCATCCTCCAGCACCCTTCCCACCTCAGCAGCCCCAGCATCCCACTCTAGCTCCCTCCCCACTTCACCAGACGAATGACCACCAACCTTGCATGACCCTCCGACATAGATACACACTATTTATGGATGTACGAATAGCTAGTGATAGGTTGTCTGTAGAAATACTTAGCGGTTTGAACGAATGGGCCGTTGGATACTTTGGGACTCCTGCTAGGTTTAGTTTGAGAAATAAGGAGCATTTGGCGGTGACCCACCAACAGCCTCTCAACAGCCATCCTTCGGAACAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00500 ko00520 ko01100 ko01110 ko02026 map00500 map00520 map01100 map01110 map02026
Pfam Domains
Protein Families
NTP_transferase

Protein Analysis

274

Amino Acids

30.54

Weight (kDa)

5.88

Isoelectric Point (pI)

47.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0028819)

Species Orthologous Gene IDs
malus_domestica MD05G1014700.v1.1
pyrus_communis pycom05g00800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 42
AciI CCGC 3 cut(s) 518, 702, 776
AclWI GGATC 1 cut(s) 100
AcsI RAATTY 3 cut(s) 106, 175, 276
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 5 cut(s) 20, 65, 350, 393, 663
AfiI CCNNNNNNNGG 2 cut(s) 58, 811
AgsI TTSAA 5 cut(s) 136, 200, 439, 455, 709
AjuI GAANNNNNNNTTGG 2 cut(s) 705, 737
AluBI AGCT 5 cut(s) 356, 401, 477, 584, 671
AluI AGCT 5 cut(s) 356, 401, 477, 584, 671
Alw26I GTCTC 1 cut(s) 483
AlwI GGATC 1 cut(s) 100
AoxI GGCC 1 cut(s) 717
ApeKI GCWGC 1 cut(s) 562
ApoI RAATTY 3 cut(s) 106, 175, 276
AspS9I GGNCC 1 cut(s) 717
AsuC2I CCSGG 1 cut(s) 282
AsuHPI GGTGA 4 cut(s) 516, 520, 590, 790
AsuNHI GCTAGC 1 cut(s) 473
BaeGI GKGCMC 1 cut(s) 45
BanI GGYRCC 1 cut(s) 42
BbsI GAAGAC 1 cut(s) 216
BbvCI CCTCAGC 1 cut(s) 558
BbvI GCAGC 1 cut(s) 574
BccI CCATC 2 cut(s) 543, 813
BceAI ACGGC 1 cut(s) 704
BciVI GTATCC 2 cut(s) 345, 719
BcnI CCSGG 1 cut(s) 282
BcoDI GTCTC 1 cut(s) 483
BfaI CTAG 4 cut(s) 474, 581, 672, 744
BfmI CTRYAG 2 cut(s) 417, 687
BfuI GTATCC 2 cut(s) 345, 719
BisI GCNGC 1 cut(s) 563
BlsI GCNGC 1 cut(s) 564
Bme1390I CCNGG 1 cut(s) 282
BmgT120I GGNCC 1 cut(s) 717
BmiI GGNNCC 2 cut(s) 44, 126
BmrFI CCNGG 1 cut(s) 282
BmsI GCATC 3 cut(s) 4, 153, 580
BmtI GCTAGC 1 cut(s) 477
BpiI GAAGAC 1 cut(s) 216
BpmI CTGGAG 1 cut(s) 525
Bpu10I CCTNAGC 1 cut(s) 558
BpuMI CCSGG 1 cut(s) 282
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 2 cut(s) 9, 281
BsaXI ACNNNNNCTCC 2 cut(s) 568, 598
Bsc4I CCNNNNNNNGG 2 cut(s) 58, 811
Bse1I ACTGG 1 cut(s) 395
BseDI CCNNGG 2 cut(s) 9, 281
BseGI GGATG 7 cut(s) 19, 154, 394, 535, 571, 664, 805
BseLI CCNNNNNNNGG 2 cut(s) 58, 811
BseMII CTCAG 4 cut(s) 71, 180, 348, 572
BseNI ACTGG 1 cut(s) 395
BseSI GKGCMC 1 cut(s) 45
BseXI GCAGC 1 cut(s) 574
BseYI CCCAGC 3 cut(s) 38, 352, 567
BshFI GGCC 1 cut(s) 719
BshNI GGYRCC 1 cut(s) 42
BsiSI CCGG 2 cut(s) 158, 281
BslFI GGGAC 3 cut(s) 35, 478, 748
BslI CCNNNNNNNGG 2 cut(s) 58, 811
BsmAI GTCTC 1 cut(s) 483
BsmFI GGGAC 3 cut(s) 35, 478, 748
BsnI GGCC 1 cut(s) 719
Bsp1286I GDGCHC 1 cut(s) 45
Bsp1407I TGTACA 1 cut(s) 63
Bsp143I GATC 1 cut(s) 92
BspACI CCGC 3 cut(s) 518, 702, 776
BspANI GGCC 1 cut(s) 719
BspCNI CTCAG 4 cut(s) 70, 179, 349, 571
BspLI GGNNCC 2 cut(s) 44, 126
BspOI GCTAGC 1 cut(s) 477
BspPI GGATC 1 cut(s) 100
BspT107I GGYRCC 1 cut(s) 42
BsrGI TGTACA 1 cut(s) 63
BsrI ACTGG 1 cut(s) 395
BssECI CCNNGG 2 cut(s) 9, 281
BssMI GATC 1 cut(s) 92
BssNI GRCGYC 1 cut(s) 5
Bst4CI ACNGT 1 cut(s) 151
BstACI GRCGYC 1 cut(s) 5
BstAUI TGTACA 1 cut(s) 63
BstC8I GCNNGC 1 cut(s) 475
BstDEI CTNAG 5 cut(s) 57, 166, 357, 558, 698
BstEII GGTNACC 2 cut(s) 508, 778
BstF5I GGATG 7 cut(s) 19, 154, 394, 535, 571, 664, 805
BstKTI GATC 1 cut(s) 95
BstMAI GTCTC 1 cut(s) 483
BstMBI GATC 1 cut(s) 92
BstMWI GCNNNNNNNGC 1 cut(s) 568
BstPI GGTNACC 2 cut(s) 508, 778
BstSCI CCNGG 1 cut(s) 280
BstSFI CTRYAG 2 cut(s) 417, 687
BstSLI GKGCMC 1 cut(s) 45
BstV1I GCAGC 1 cut(s) 574
BstV2I GAAGAC 1 cut(s) 216
BsuI GTATCC 2 cut(s) 345, 719
BsuRI GGCC 1 cut(s) 719
BtsCI GGATG 7 cut(s) 19, 154, 394, 535, 571, 664, 805
BtsIMutI CAGTG 1 cut(s) 147
Cac8I GCNNGC 1 cut(s) 475
Cfr13I GGNCC 1 cut(s) 717
CseI GACGC 1 cut(s) 245
Csp6I GTAC 5 cut(s) 19, 64, 349, 392, 662
CspCI CAANNNNNGTGG 2 cut(s) 602, 637
CviAII CATG 2 cut(s) 239, 625
CviQI GTAC 5 cut(s) 19, 64, 349, 392, 662
DdeI CTNAG 5 cut(s) 57, 166, 357, 558, 698
DpnI GATC 1 cut(s) 94
DpnII GATC 1 cut(s) 92
Eco91I GGTNACC 2 cut(s) 508, 778
EcoO65I GGTNACC 2 cut(s) 508, 778
EcoRI GAATTC 1 cut(s) 106
FaeI CATG 2 cut(s) 242, 628
FaqI GGGAC 3 cut(s) 35, 478, 748
FatI CATG 2 cut(s) 238, 624
FauI CCCGC 1 cut(s) 525
Fnu4HI GCNGC 1 cut(s) 563
FokI GGATG 7 cut(s) 26, 141, 401, 522, 558, 671, 792
Fsp4HI GCNGC 1 cut(s) 563
FspBI CTAG 4 cut(s) 474, 581, 672, 744
GluI GCNGC 1 cut(s) 563
GsaI CCCAGC 3 cut(s) 42, 356, 571
GsuI CTGGAG 1 cut(s) 525
HaeIII GGCC 1 cut(s) 719
HapII CCGG 2 cut(s) 158, 281
HgaI GACGC 1 cut(s) 245
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 2 cut(s) 242, 628
HincII GTYRAC 2 cut(s) 75, 363
HindII GTYRAC 2 cut(s) 75, 363
HinfI GANTC 5 cut(s) 48, 164, 359, 466, 736
HpaI GTTAAC 1 cut(s) 75
HpaII CCGG 2 cut(s) 158, 281
HphI GGTGA 4 cut(s) 516, 520, 590, 790
Hpy166II GTNNAC 3 cut(s) 64, 75, 363
Hpy188I TCNGA 3 cut(s) 10, 635, 814
Hpy188III TCNNGA 1 cut(s) 168
Hpy8I GTNNAC 3 cut(s) 64, 75, 363
HpyAV CCTTC 2 cut(s) 559, 819
HpyCH4III ACNGT 1 cut(s) 151
HpyCH4V TGCA 1 cut(s) 624
HpyF10VI GCNNNNNNNGC 1 cut(s) 568
HpyF3I CTNAG 5 cut(s) 57, 166, 357, 558, 698
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 2 cut(s) 242, 628
KspAI GTTAAC 1 cut(s) 75
Kzo9I GATC 1 cut(s) 92
LmnI GCTCC 2 cut(s) 589, 766
Lsp1109I GCAGC 1 cut(s) 574
LweI GCATC 3 cut(s) 4, 153, 580
MaeI CTAG 4 cut(s) 474, 581, 672, 744
MaeIII GTNAC 4 cut(s) 232, 508, 522, 778
MalI GATC 1 cut(s) 94
MboI GATC 1 cut(s) 92
MboII GAAGA 1 cut(s) 221
MhlI GDGCHC 1 cut(s) 45
MluCI AATT 7 cut(s) 106, 175, 189, 221, 266, 276, 366
MlyI GAGTC 5 cut(s) 57, 158, 368, 460, 730
MmeI TCCRAC 2 cut(s) 658, 703
MnlI CCTC 8 cut(s) 4, 354, 490, 549, 567, 598, 641, 804
MseI TTAA 3 cut(s) 74, 173, 288
MspA1I CMGCKG 1 cut(s) 356
MspI CCGG 2 cut(s) 158, 281
MspR9I CCNGG 1 cut(s) 282
MwoI GCNNNNNNNGC 1 cut(s) 568
NciI CCSGG 1 cut(s) 282
NdeII GATC 1 cut(s) 92
NheI GCTAGC 1 cut(s) 473
NlaIII CATG 2 cut(s) 242, 628
NlaIV GGNNCC 2 cut(s) 44, 126
NmuCI GTSAC 3 cut(s) 508, 522, 778
PcsI WCGNNNNNNNCGW 1 cut(s) 717
PkrI GCNGC 1 cut(s) 564
PleI GAGTC 5 cut(s) 56, 158, 367, 460, 730
PpsI GAGTC 5 cut(s) 56, 158, 367, 460, 730
PspEI GGTNACC 2 cut(s) 508, 778
PspFI CCCAGC 3 cut(s) 38, 352, 567
PspN4I GGNNCC 2 cut(s) 44, 126
PspPI GGNCC 1 cut(s) 717
PvuII CAGCTG 1 cut(s) 356
RsaI GTAC 5 cut(s) 20, 65, 350, 393, 663
RsaNI GTAC 5 cut(s) 19, 64, 349, 392, 662
SaqAI TTAA 3 cut(s) 74, 173, 288
SatI GCNGC 1 cut(s) 563
Sau3AI GATC 1 cut(s) 92
Sau96I GGNCC 1 cut(s) 717
SchI GAGTC 5 cut(s) 57, 158, 368, 460, 730
ScrFI CCNGG 1 cut(s) 282
SduI GDGCHC 1 cut(s) 45
SfaNI GCATC 3 cut(s) 4, 153, 580
SfcI CTRYAG 2 cut(s) 417, 687
Sse9I AATT 7 cut(s) 106, 175, 189, 221, 266, 276, 366
SsiI CCGC 3 cut(s) 518, 702, 776
SspI AATATT 1 cut(s) 458
SspMI CTAG 4 cut(s) 474, 581, 672, 744
StyD4I CCNGG 1 cut(s) 280
TaaI ACNGT 1 cut(s) 151
TasI AATT 7 cut(s) 106, 175, 189, 221, 266, 276, 366
TatI WGTACW 1 cut(s) 63
Tru1I TTAA 3 cut(s) 74, 173, 288
Tru9I TTAA 3 cut(s) 74, 173, 288
TscAI CASTG 1 cut(s) 154
TseFI GTSAC 3 cut(s) 508, 522, 778
TseI GCWGC 1 cut(s) 562
Tsp45I GTSAC 3 cut(s) 508, 522, 778
TspDTI ATGAA 3 cut(s) 99, 119, 143
TspGWI ACGGA 1 cut(s) 105
TspRI CASTG 1 cut(s) 154
XapI RAATTY 3 cut(s) 106, 175, 276
XspI CTAG 4 cut(s) 474, 581, 672, 744
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.