Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0007385

Physical Location & Seq

Genomic Coordinates Forward (+)

9023530 .. 9028483

Gene Structure 4954 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1058200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1602 bp

ATGAACGGTCCGGATCTCACAAAGACCCTGCCCATAAGAAAAACACCTTCCCTCGTTGTTTCCTATTTAGATAAAATTCAAAACTCACTCTCTCTCTCCTCCTTCTCTGCGACTCCTCCCCCGTTAAATAAACTCCTTCCGCTTCCAGTGGCGATGGAGGCCTACAGAGAGAAAGCGAGAGAGAGAGAGAGAGTTGGAGAGAGCTCAATGGCCAAGGGCAGCATTGGAATTTCCGTAACCCTCTCGCTGCTGCTGCTGCTGCCGCTTCTTGTTCTCGAAACCGCGGCGGTTGAGAAGAATTACGAGCTGAAGAAGCAGCAGCGCTACCGGAATGCTTACGCGACGATGATGTACATGGGGACGCCGAGGGACTACGAGTTCTACGTGGCGATACGTGTCATGCTCAGATCGCTCTCCAACCTCCACGTGGAGGCCGATCTGGTCGTCATTGCTTCGCCGGACGTGCCTCTCCGCTGGGTCCAAACTCTAGAACAAGAAGATGGGGCCAAAGTGGTGAGAGTGGAAAATGTGAACAATCCATACAGAAATCAGGCCAATTTTGACAAAAGATTCAAGTTAACACTCAACAAACTGTATGCATGGAGCTTAGTGGACTATGACAGAGTGGTCATGCTTGATGCTGACAACCTCTTTCTCCAAAAAACCGATGAGCTTTTCCAGTGTGGACAATTCTGTGCAGCTTTCATTAACCCTTGCATCTTCCATACAGGCCTCTTTGTGTTGCAGCCATCAATGAAAGTATTCAAGGACCTGCTTCATGAGGTTGAAATTGGAAGAGACAATCCAGACGGTGCTGACCAGGGTTTTATAAGTGGTTACTTTTCCGACTTACTTGATCAGCCCTTGTTCCATCCACCTTCTAACGGCTCCAAGCTTAACGGACACTACAGACTGCCTTTGGGCTACCAAATGGATGCTTCTTATTATTATCTTAAATTGCATTGGAGCGTACCCTGCGGCCCCAACAGCGTGATTACCTTCCCCGGTGCTGCATGGTTGAAGCCATGGTATTGGTGGTCATGGCCTGTTCTCCCGTTGGGCATTTCATGGCATGCACGACGTCATCAAACTCTCGGGTACGGTGCTGAGATGCCAGTGATCCTAATCCAGGCGCTAATTTACCTCGGAATAATAGCAATGACGCGCCTAACACGACCAAATATATCGAAGCTGTGCTATAGGCGCTCGGACAAGAGCATTAACTTGATACACACCATCCTCAAAATGATAGCTGCGTGGTCGATTGTGGCTGCATACGTGGTACCATTCGTACTCATTCCTCACACAGTCCATCCGATATTAGGCTGGAGTTTGTATTTGCTTGGCTCTTTTGCACTTTCCTTCGTAGCAATCACTGCTCTGTTCCTGCCAATGGTACCTGTTCTAGCTCCGTGGCTTGGGATTTTTGGTGTCCTCTTTGTCATGGCATTTCCTTGGTACCAAAATGGTGTTGTACGAGCTCTCTCTGTATTTGCGTATGCATTTTGTGTGGCGCCATTCGCATGGGTTTCGCTGGTTAAGGTCATGGCATCCATTCAAGCCGCAGTTGAAAGGGAAGCTTATTTTCCGAAAATCGGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005976 GO:0005977 GO:0005978 GO:0006073 GO:0006091 GO:0006112 GO:0008150 GO:0008152 GO:0008194 GO:0008466 GO:0009058 GO:0009059 GO:0009250 GO:0009987 GO:0015980 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0033692 GO:0034637 GO:0034645 GO:0035251 GO:0043170 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0055114 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Mannosyl_trans3

Protein Analysis

534

Amino Acids

60.31

Weight (kDa)

9.1

Isoelectric Point (pI)

31.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007385)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35710 AT2G35710 AT2G35710 AT2G35710 AT4G16600
fragaria_vesca	FvH4_5g18860 FvH4_5g18860 FvH4_5g18860
malus_domestica	MD06G1058200.v1.1
prunus_persica	Prupe.5G069400_v2.0.a1 Prupe.5G069400_v2.0.a1 Prupe.5G069400_v2.0.a1 Prupe.5G069400_v2.0.a1
pyrus_communis	pycom06g04890
rosa_chinensis	RchiOBHm_Chr7g0203241
rosa_laevigata	RLG00000003541
rosa_multiflora	Rmu_sc0004654.1_g000017 Rmu_sc0009229.1_g000004
rosa_roxburghii	Rroxscaffold_3G00253920
rosa_rugosa	Rorug07G0075400
rosa_samantha	Rh7AG204700 Rh7BG204100 Rh7CG215700 Rh7DG211300
rosa_wichuraiana	Rw7G017820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	830
AasI	GACNNNNNNGTC	1 cut(s)	626
AatII	GACGTC	1 cut(s)	1084
Acc36I	ACCTGC	1 cut(s)	780
Acc65I	GGTACC	3 cut(s)	1282, 1396, 1458
AccB1I	GGYRCC	4 cut(s)	1282, 1396, 1458, 1513
AccII	CGCG	3 cut(s)	284, 341, 1165
AccIII	TCCGGA	1 cut(s)	10
AciI	CCGC	8 cut(s)	140, 263, 282, 284, 287, 472, 978, 1563
AclWI	GGATC	2 cut(s)	21, 1114
AcoI	YGGCCR	1 cut(s)	210
AcsI	RAATTY	2 cut(s)	75, 228
AcuI	CTGAAG	1 cut(s)	329
AcvI	CACGTG	1 cut(s)	427
AcyI	GRCGYC	3 cut(s)	362, 1081, 1514
AfaI	GTAC	8 cut(s)	353, 972, 1100, 1284, 1293, 1398, 1460, 1476
AfeI	AGCGCT	1 cut(s)	323
AfiI	CCNNNNNNNGG	8 cut(s)	427, 430, 884, 1129, 1322, 1393, 1418, 1595
AflIII	ACRYGT	1 cut(s)	394
AgsI	TTSAA	7 cut(s)	80, 574, 766, 788, 1021, 1559, 1571
AjiI	CACGTC	1 cut(s)	463
AjnI	CCWGG	2 cut(s)	819, 1128
AloI	GAACNNNNNNTCC	2 cut(s)	362, 394
Alw21I	GWGCWC	2 cut(s)	206, 1483
Alw26I	GTCTC	1 cut(s)	792
AlwI	GGATC	2 cut(s)	21, 1114
Ama87I	CYCGRG	1 cut(s)	1094
Aor13HI	TCCGGA	1 cut(s)	10
Aor51HI	AGCGCT	1 cut(s)	323
AoxI	GGCC	8 cut(s)	159, 210, 432, 504, 552, 730, 979, 1043
ApoI	RAATTY	2 cut(s)	75, 228
Asp700I	GAANNNNTTC	1 cut(s)	761
Asp718I	GGTACC	3 cut(s)	1282, 1396, 1458
AspLEI	GCGC	5 cut(s)	324, 1135, 1167, 1206, 1516
AspS9I	GGNCC	5 cut(s)	8, 478, 504, 769, 980
AsuC2I	CCSGG	1 cut(s)	1005
AsuHPI	GGTGA	1 cut(s)	526
AvaI	CYCGRG	1 cut(s)	1094
AvaII	GGWCC	3 cut(s)	8, 478, 769
BalI	TGGCCA	1 cut(s)	212
BanI	GGYRCC	4 cut(s)	1282, 1396, 1458, 1513
BanII	GRGCYC	2 cut(s)	206, 1483
BbrPI	CACGTG	1 cut(s)	427
Bbv12I	GWGCWC	2 cut(s)	206, 1483
BccI	CCATC	6 cut(s)	148, 494, 757, 879, 1244, 1320
BceAI	ACGGC	1 cut(s)	901
BcgI	CGANNNNNNTGC	2 cut(s)	1512, 1546
BciT130I	CCWGG	2 cut(s)	821, 1130
BclI	TGATCA	1 cut(s)	856
BcnI	CCSGG	1 cut(s)	1005
BcoDI	GTCTC	1 cut(s)	792
BfaI	CTAG	2 cut(s)	488, 1406
BfmI	CTRYAG	3 cut(s)	163, 907, 1198
BfoI	RGCGCY	4 cut(s)	325, 1136, 1207, 1517
BfuAI	ACCTGC	1 cut(s)	780
Bme1390I	CCNGG	3 cut(s)	821, 1005, 1130
Bme18I	GGWCC	3 cut(s)	8, 478, 769
BmeT110I	CYCGRG	1 cut(s)	1094
BmgBI	CACGTC	1 cut(s)	463
BmgT120I	GGNCC	5 cut(s)	8, 478, 504, 769, 980
BmiI	GGNNCC	8 cut(s)	479, 505, 889, 982, 1284, 1398, 1460, 1515
BmrFI	CCNGG	3 cut(s)	821, 1005, 1130
BmsI	GCATC	5 cut(s)	628, 726, 925, 1101, 1559
BpmI	CTGGAG	1 cut(s)	1348
BpuMI	CCSGG	1 cut(s)	1005
BsaAI	YACGTR	4 cut(s)	385, 395, 427, 1279
BsaBI	GATNNNNATC	1 cut(s)	1124
BsaHI	GRCGYC	3 cut(s)	362, 1081, 1514
BsaJI	CCNNGG	9 cut(s)	213, 282, 365, 820, 1003, 1025, 1144, 1412, 1454
BsaWI	WCCGGW	2 cut(s)	10, 327
Bsc4I	CCNNNNNNNGG	8 cut(s)	427, 430, 884, 1129, 1322, 1393, 1418, 1595
Bse1I	ACTGG	3 cut(s)	146, 679, 1115
Bse3DI	GCAATG	2 cut(s)	447, 1164
Bse8I	GATNNNNATC	1 cut(s)	1124
BseAI	TCCGGA	1 cut(s)	10
BseBI	CCWGG	2 cut(s)	821, 1130
BseDI	CCNNGG	9 cut(s)	213, 282, 365, 820, 1003, 1025, 1144, 1412, 1454
BseGI	GGATG	5 cut(s)	871, 940, 1236, 1312, 1550
BseJI	GATNNNNATC	1 cut(s)	1124
BseLI	CCNNNNNNNGG	8 cut(s)	427, 430, 884, 1129, 1322, 1393, 1418, 1595
BseMI	GCAATG	2 cut(s)	447, 1164
BseMII	CTCAG	2 cut(s)	418, 1098
BseNI	ACTGG	3 cut(s)	146, 679, 1115
BseRI	GAGGAG	2 cut(s)	88, 105
BseYI	CCCAGC	1 cut(s)	474
BsgI	GTGCAG	1 cut(s)	717
Bsh1236I	CGCG	3 cut(s)	284, 341, 1165
BshFI	GGCC	8 cut(s)	161, 212, 434, 506, 554, 732, 981, 1045
BshNI	GGYRCC	4 cut(s)	1282, 1396, 1458, 1513
BsiHKAI	GWGCWC	2 cut(s)	206, 1483
BsiHKCI	CYCGRG	1 cut(s)	1094
BsiSI	CCGG	4 cut(s)	11, 328, 458, 1005
BslFI	GGGAC	2 cut(s)	373, 383
BslI	CCNNNNNNNGG	8 cut(s)	427, 430, 884, 1129, 1322, 1393, 1418, 1595
BsmAI	GTCTC	1 cut(s)	792
BsmFI	GGGAC	2 cut(s)	373, 383
BsmI	GAATGC	1 cut(s)	337
BsnI	GGCC	8 cut(s)	161, 212, 434, 506, 554, 732, 981, 1045
BsoBI	CYCGRG	1 cut(s)	1094
Bsp1286I	GDGCHC	2 cut(s)	206, 1483
Bsp13I	TCCGGA	1 cut(s)	10
Bsp1407I	TGTACA	1 cut(s)	351
Bsp143I	GATC	5 cut(s)	13, 407, 436, 856, 1119
Bsp19I	CCATGG	1 cut(s)	1025
BspACI	CCGC	8 cut(s)	140, 263, 282, 284, 287, 472, 978, 1563
BspANI	GGCC	8 cut(s)	161, 212, 434, 506, 554, 732, 981, 1045
BspCNI	CTCAG	2 cut(s)	417, 1099
BspEI	TCCGGA	1 cut(s)	10
BspFNI	CGCG	3 cut(s)	284, 341, 1165
BspHI	TCATGA	1 cut(s)	778
BspLI	GGNNCC	8 cut(s)	479, 505, 889, 982, 1284, 1398, 1460, 1515
BspMI	ACCTGC	1 cut(s)	780
BspPI	GGATC	2 cut(s)	21, 1114
BspT107I	GGYRCC	4 cut(s)	1282, 1396, 1458, 1513
BsrDI	GCAATG	2 cut(s)	447, 1164
BsrGI	TGTACA	1 cut(s)	351
BsrI	ACTGG	3 cut(s)	146, 679, 1115
BssECI	CCNNGG	9 cut(s)	213, 282, 365, 820, 1003, 1025, 1144, 1412, 1454
BssMI	GATC	5 cut(s)	13, 407, 436, 856, 1119
BssNI	GRCGYC	3 cut(s)	362, 1081, 1514
BssT1I	CCWWGG	3 cut(s)	213, 1025, 1454
Bst2UI	CCWGG	2 cut(s)	821, 1130
Bst4CI	ACNGT	5 cut(s)	8, 594, 812, 1103, 1309
Bst6I	CTCTTC	1 cut(s)	790
BstACI	GRCGYC	3 cut(s)	362, 1081, 1514
BstAPI	GCANNNNNTGC	1 cut(s)	1376
BstAUI	TGTACA	1 cut(s)	351
BstBAI	YACGTR	4 cut(s)	385, 395, 427, 1279
BstC8I	GCNNGC	1 cut(s)	1074
BstDEI	CTNAG	3 cut(s)	404, 607, 1107
BstDSI	CCRYGG	3 cut(s)	282, 1025, 1412
BstENI	CCTNNNNNAGG	1 cut(s)	1127
BstF5I	GGATG	5 cut(s)	871, 940, 1236, 1312, 1550
BstFNI	CGCG	3 cut(s)	284, 341, 1165
BstH2I	RGCGCY	4 cut(s)	325, 1136, 1207, 1517
BstHHI	GCGC	5 cut(s)	324, 1135, 1167, 1206, 1516
BstKTI	GATC	5 cut(s)	16, 410, 439, 859, 1122
BstMAI	GTCTC	1 cut(s)	792
BstMBI	GATC	5 cut(s)	13, 407, 436, 856, 1119
BstNI	CCWGG	2 cut(s)	821, 1130
BstNSI	RCATGY	1 cut(s)	1076
BstSCI	CCNGG	3 cut(s)	819, 1003, 1128
BstSFI	CTRYAG	3 cut(s)	163, 907, 1198
BstUI	CGCG	3 cut(s)	284, 341, 1165
BstX2I	RGATCY	1 cut(s)	13
BstXI	CCANNNNNNTGG	2 cut(s)	1032, 1524
BstYI	RGATCY	1 cut(s)	13
BsuRI	GGCC	8 cut(s)	161, 212, 434, 506, 554, 732, 981, 1045
BtgI	CCRYGG	3 cut(s)	282, 1025, 1412
BtgZI	GCGATG	1 cut(s)	167
BtrI	CACGTC	1 cut(s)	463
BtsCI	GGATG	5 cut(s)	871, 940, 1236, 1312, 1550
BtsI	GCAGTG	1 cut(s)	1374
BtsIMutI	CAGTG	4 cut(s)	153, 686, 1122, 1374
BveI	ACCTGC	1 cut(s)	780
Cac8I	GCNNGC	1 cut(s)	1074
CciI	TCATGA	1 cut(s)	778
CfoI	GCGC	5 cut(s)	324, 1135, 1167, 1206, 1516
Cfr13I	GGNCC	5 cut(s)	8, 478, 504, 769, 980
Cfr42I	CCGCGG	1 cut(s)	285
CpoI	CGGWCCG	1 cut(s)	8
CseI	GACGC	2 cut(s)	370, 1171
Csp6I	GTAC	8 cut(s)	352, 971, 1099, 1283, 1292, 1397, 1459, 1475
CspI	CGGWCCG	1 cut(s)	8
CviQI	GTAC	8 cut(s)	352, 971, 1099, 1283, 1292, 1397, 1459, 1475
DdeI	CTNAG	3 cut(s)	404, 607, 1107
DinI	GGCGCC	1 cut(s)	1515
DpnI	GATC	5 cut(s)	15, 409, 438, 858, 1121
DpnII	GATC	5 cut(s)	13, 407, 436, 856, 1119
DrdI	GACNNNNNNGTC	1 cut(s)	626
DseDI	GACNNNNNNGTC	1 cut(s)	626
EaeI	YGGCCR	1 cut(s)	210
Eam1104I	CTCTTC	1 cut(s)	790
EarI	CTCTTC	1 cut(s)	790
Ecl136II	GAGCTC	2 cut(s)	204, 1481
Eco130I	CCWWGG	3 cut(s)	213, 1025, 1454
Eco147I	AGGCCT	2 cut(s)	161, 732
Eco24I	GRGCYC	2 cut(s)	206, 1483
Eco47I	GGWCC	3 cut(s)	8, 478, 769
Eco47III	AGCGCT	1 cut(s)	323
Eco53kI	GAGCTC	2 cut(s)	204, 1481
Eco57I	CTGAAG	1 cut(s)	329
Eco72I	CACGTG	1 cut(s)	427
Eco88I	CYCGRG	1 cut(s)	1094
EcoICRI	GAGCTC	2 cut(s)	204, 1481
EcoNI	CCTNNNNNAGG	1 cut(s)	1127
EcoO109I	RGGNCCY	1 cut(s)	769
EcoRII	CCWGG	2 cut(s)	819, 1128
EcoT14I	CCWWGG	3 cut(s)	213, 1025, 1454
EcoT22I	ATGCAT	2 cut(s)	601, 1504
EcoT38I	GRGCYC	2 cut(s)	206, 1483
EgeI	GGCGCC	1 cut(s)	1515
EheI	GGCGCC	1 cut(s)	1515
ErhI	CCWWGG	3 cut(s)	213, 1025, 1454
FalI	AAGNNNNNCTT	2 cut(s)	1564, 1596
FaqI	GGGAC	2 cut(s)	373, 383
FbaI	TGATCA	1 cut(s)	856
FokI	GGATG	5 cut(s)	858, 947, 1223, 1299, 1537
FriOI	GRGCYC	2 cut(s)	206, 1483
FspBI	CTAG	2 cut(s)	488, 1406
GlaI	GCGC	5 cut(s)	323, 1134, 1166, 1205, 1515
GsaI	CCCAGC	1 cut(s)	478
GsuI	CTGGAG	1 cut(s)	1348
HaeII	RGCGCY	4 cut(s)	325, 1136, 1207, 1517
HaeIII	GGCC	8 cut(s)	161, 212, 434, 506, 554, 732, 981, 1045
HapII	CCGG	4 cut(s)	11, 328, 458, 1005
HgaI	GACGC	2 cut(s)	370, 1171
HhaI	GCGC	5 cut(s)	324, 1135, 1167, 1206, 1516
Hin1I	GRCGYC	3 cut(s)	362, 1081, 1514
Hin6I	GCGC	5 cut(s)	322, 1133, 1165, 1204, 1514
HinP1I	GCGC	5 cut(s)	322, 1133, 1165, 1204, 1514
HincII	GTYRAC	1 cut(s)	579
HindII	GTYRAC	1 cut(s)	579
HindIII	AAGCTT	2 cut(s)	893, 1578
HinfI	GANTC	2 cut(s)	112, 570
HpaI	GTTAAC	1 cut(s)	579
HpaII	CCGG	4 cut(s)	11, 328, 458, 1005
HphI	GGTGA	1 cut(s)	526
Hpy166II	GTNNAC	4 cut(s)	532, 579, 613, 686
Hpy188I	TCNGA	6 cut(s)	407, 847, 1148, 1210, 1317, 1590
Hpy188III	TCNNGA	5 cut(s)	11, 275, 488, 779, 806
Hpy8I	GTNNAC	4 cut(s)	532, 579, 613, 686
Hpy99I	CGWCG	2 cut(s)	346, 1083
HpyAV	CCTTC	6 cut(s)	57, 112, 146, 888, 1009, 1372
HpyCH4III	ACNGT	5 cut(s)	8, 594, 812, 1103, 1309
HpyCH4IV	ACGT	6 cut(s)	384, 394, 426, 462, 1081, 1278
HpyF3I	CTNAG	3 cut(s)	404, 607, 1107
HpySE526I	ACGT	6 cut(s)	384, 394, 426, 462, 1081, 1278
Hsp92I	GRCGYC	3 cut(s)	362, 1081, 1514
HspAI	GCGC	5 cut(s)	322, 1133, 1165, 1204, 1514
KasI	GGCGCC	1 cut(s)	1513
Kpn2I	TCCGGA	1 cut(s)	10
KpnI	GGTACC	3 cut(s)	1286, 1400, 1462
Ksp22I	TGATCA	1 cut(s)	856
KspAI	GTTAAC	1 cut(s)	579
KspI	CCGCGG	1 cut(s)	285
Kzo9I	GATC	5 cut(s)	13, 407, 436, 856, 1119
LmnI	GCTCC	4 cut(s)	603, 893, 966, 1414
LweI	GCATC	5 cut(s)	628, 726, 925, 1101, 1559
MaeI	CTAG	2 cut(s)	488, 1406
MaeII	ACGT	6 cut(s)	384, 394, 426, 462, 1081, 1278
MaeIII	GTNAC	2 cut(s)	235, 836
MalI	GATC	5 cut(s)	15, 409, 438, 858, 1121
MboI	GATC	5 cut(s)	13, 407, 436, 856, 1119
MboII	GAAGA	5 cut(s)	307, 322, 509, 712, 807
MflI	RGATCY	1 cut(s)	13
MhlI	GDGCHC	2 cut(s)	206, 1483
MlsI	TGGCCA	1 cut(s)	212
MluCI	AATT	8 cut(s)	75, 228, 298, 556, 689, 789, 956, 1137
MluNI	TGGCCA	1 cut(s)	212
Mly113I	GGCGCC	1 cut(s)	1514
MlyI	GAGTC	1 cut(s)	106
MmeI	TCCRAC	3 cut(s)	175, 441, 870
Mox20I	TGGCCA	1 cut(s)	212
Mph1103I	ATGCAT	2 cut(s)	601, 1504
MroI	TCCGGA	1 cut(s)	10
MroXI	GAANNNNTTC	1 cut(s)	761
MscI	TGGCCA	1 cut(s)	212
MseI	TTAA	7 cut(s)	125, 578, 708, 897, 954, 1221, 1539
MslI	CAYNNNNRTG	1 cut(s)	1522
Msp20I	TGGCCA	1 cut(s)	212
MspA1I	CMGCKG	2 cut(s)	284, 474
MspI	CCGG	4 cut(s)	11, 328, 458, 1005
MspR9I	CCNGG	3 cut(s)	821, 1005, 1130
Mva1269I	GAATGC	1 cut(s)	337
MvaI	CCWGG	2 cut(s)	821, 1130
MvnI	CGCG	3 cut(s)	284, 341, 1165
NarI	GGCGCC	1 cut(s)	1514
NciI	CCSGG	1 cut(s)	1005
NcoI	CCATGG	1 cut(s)	1025
NdeII	GATC	5 cut(s)	13, 407, 436, 856, 1119
NlaIV	GGNNCC	8 cut(s)	479, 505, 889, 982, 1284, 1398, 1460, 1515
NmeAIII	GCCGAG	1 cut(s)	390
NsiI	ATGCAT	2 cut(s)	601, 1504
NspI	RCATGY	1 cut(s)	1076
PaeI	GCATGC	1 cut(s)	1076
PagI	TCATGA	1 cut(s)	778
PceI	AGGCCT	2 cut(s)	161, 732
PcsI	WCGNNNNNNNCGW	2 cut(s)	381, 432
PctI	GAATGC	1 cut(s)	337
PdmI	GAANNNNTTC	1 cut(s)	761
PfeI	GAWTC	1 cut(s)	570
PleI	GAGTC	1 cut(s)	106
PluTI	GGCGCC	1 cut(s)	1517
PmaCI	CACGTG	1 cut(s)	427
PmlI	CACGTG	1 cut(s)	427
PpsI	GAGTC	1 cut(s)	106
Ppu21I	YACGTR	4 cut(s)	385, 395, 427, 1279
PpuMI	RGGWCCY	1 cut(s)	769
PsiI	TTATAA	1 cut(s)	830
Psp124BI	GAGCTC	2 cut(s)	206, 1483
Psp5II	RGGWCCY	1 cut(s)	769
Psp6I	CCWGG	2 cut(s)	819, 1128
PspCI	CACGTG	1 cut(s)	427
PspFI	CCCAGC	1 cut(s)	474
PspGI	CCWGG	2 cut(s)	819, 1128
PspN4I	GGNNCC	8 cut(s)	479, 505, 889, 982, 1284, 1398, 1460, 1515
PspPI	GGNCC	5 cut(s)	8, 478, 504, 769, 980
PspPPI	RGGWCCY	1 cut(s)	769
PsrI	GAACNNNNNNTAC	2 cut(s)	524, 556
PsuI	RGATCY	1 cut(s)	13
RsaI	GTAC	8 cut(s)	353, 972, 1100, 1284, 1293, 1398, 1460, 1476
RsaNI	GTAC	8 cut(s)	352, 971, 1099, 1283, 1292, 1397, 1459, 1475
RseI	CAYNNNNRTG	1 cut(s)	1522
Rsr2I	CGGWCCG	1 cut(s)	8
RsrII	CGGWCCG	1 cut(s)	8
SacI	GAGCTC	2 cut(s)	206, 1483
SacII	CCGCGG	1 cut(s)	285
SaqAI	TTAA	7 cut(s)	125, 578, 708, 897, 954, 1221, 1539
Sau3AI	GATC	5 cut(s)	13, 407, 436, 856, 1119
Sau96I	GGNCC	5 cut(s)	8, 478, 504, 769, 980
SchI	GAGTC	1 cut(s)	106
ScrFI	CCNGG	3 cut(s)	821, 1005, 1130
SduI	GDGCHC	2 cut(s)	206, 1483
SfaNI	GCATC	5 cut(s)	628, 726, 925, 1101, 1559
SfcI	CTRYAG	3 cut(s)	163, 907, 1198
SfoI	GGCGCC	1 cut(s)	1515
Sfr303I	CCGCGG	1 cut(s)	285
SgrBI	CCGCGG	1 cut(s)	285
SinI	GGWCC	3 cut(s)	8, 478, 769
SmiMI	CAYNNNNRTG	1 cut(s)	1522
SphI	GCATGC	1 cut(s)	1076
Sse9I	AATT	8 cut(s)	75, 228, 298, 556, 689, 789, 956, 1137
SseBI	AGGCCT	2 cut(s)	161, 732
SsiI	CCGC	8 cut(s)	140, 263, 282, 284, 287, 472, 978, 1563
SspDI	GGCGCC	1 cut(s)	1513
SspMI	CTAG	2 cut(s)	488, 1406
SstI	GAGCTC	2 cut(s)	206, 1483
StuI	AGGCCT	2 cut(s)	161, 732
StyD4I	CCNGG	3 cut(s)	819, 1003, 1128
StyI	CCWWGG	3 cut(s)	213, 1025, 1454
TaaI	ACNGT	5 cut(s)	8, 594, 812, 1103, 1309
TaiI	ACGT	6 cut(s)	387, 397, 429, 465, 1084, 1281
TaqI	TCGA	3 cut(s)	276, 1187, 1262
TasI	AATT	8 cut(s)	75, 228, 298, 556, 689, 789, 956, 1137
TatI	WGTACW	1 cut(s)	351
TauI	GCSGC	4 cut(s)	265, 287, 981, 1565
TfiI	GAWTC	1 cut(s)	570
Tru1I	TTAA	7 cut(s)	125, 578, 708, 897, 954, 1221, 1539
Tru9I	TTAA	7 cut(s)	125, 578, 708, 897, 954, 1221, 1539
TscAI	CASTG	4 cut(s)	153, 686, 1122, 1381
TspDTI	ATGAA	5 cut(s)	17, 694, 767, 770, 1056
TspGWI	ACGGA	3 cut(s)	223, 915, 1401
TspRI	CASTG	4 cut(s)	153, 686, 1122, 1381
VpaK11BI	GGWCC	3 cut(s)	8, 478, 769
XagI	CCTNNNNNAGG	1 cut(s)	1127
XapI	RAATTY	2 cut(s)	75, 228
XbaI	TCTAGA	1 cut(s)	487
XceI	RCATGY	1 cut(s)	1076
XcmI	CCANNNNNNNNNTGG	2 cut(s)	424, 1032
XmnI	GAANNNNTTC	1 cut(s)	761
XspI	CTAG	2 cut(s)	488, 1406
ZraI	GACGTC	1 cut(s)	1082
Zsp2I	ATGCAT	2 cut(s)	601, 1504

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.