Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0016841

Physical Location & Seq

Genomic Coordinates Forward (+)

23018794 .. 23022698

Gene Structure 3905 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1096000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGAATGACAAAAGGGGTAGTAATAATACTGAGATTAACATTAACATCCCTTGTTCTGTGACCAAAGCCGAACACCATGAGAAATCCAGCAAGGGAGAAGGAGGAGGAGGAGGAGGAGAAGAAGAAGGCTTCCCCTTTAAGGATTGGGTGTGGAAAGTCTGGGAATTTGCCAGAGAAGATAGCAACAGGGTGAAATTCTCACTGAAAGTGGGGCTGGCAGTGCTTCTTGTCTCTCTGCTCATACTCTTCCGAGCACCTTATGAAGTTTTTGGCACCAATATCATTTGGTCCATCCTCACGGTTGCCATCATGTTCGAATATACAGTTGGTGCAACATTTAACAGAGGATTTAACCGAGCTCTTGGGAGTTTGCTTGCCGGAGTTTTGGCCATTAGTGTTGCTCAAATAGCACTAAGCTCTGGACGAGTAGCTGAACCTATCATCATTGGCTTTAGCATCTTCCTAATCGGAACCATTACATCGTTCATGAAGTTGTGGCCATCACTCGTGCCATATGAATATGGATTCAGGGTCGTACTTTTCACCTATTGTTTGATCGTTGTTTCTGGGTATCGCTTATCGATGGGAAACCCGATGAGGACAGCAATGGATCGACTCTACTCGATCGCCATCGGAGGGTTTGTAGCAGTCTTAGTGAATGTGCTTGTTTGCCCTATTTGGGCCGGTGAGCAATTGCACAAGGAGCTAGTCAATAACTTTAACTCGGTGGCCGACTCGCTTGAAGAAAGTGTTAGGAAATATCTAGAAGATGATGGGTCAGTGCACCCAGAATTCTCCAAAACTGTTATGGGTGAGTTTCCAGACGAGCCTGCCTATAGGAAATGCCGGAGCACATTGAACTCATCAGCAAAACTGGAGGCTTTGGCTGTGTCGGCAAAATGGGAGCCCCCACACGGCAGATTCAGGCACTTCTTCTATCCTTGGTCAGAATATGTCAAAGTTGCAGCAGTTTTGAGGTATTGTGCTTATGAGGTCATGGCACTTCATGGAGTTCTGCACTCTGAAATTCAGGCACCCTACAACCTCCGGATGACATTCCAATCGGAGATCCAAGAAGCGACGAGCCAGGCCGCAGAACTGGTAAGGAGTCTAGGGCAAGACATCAGCGACATGAAAAGAAGCACCAGAACATCCCTACTCAAGAAACTCCACAGCTCAACGGAGCGACTCCAACGCGCCATTGACGTGCACTCTTACCTCCTCACATCGCCTTGTGACCCCCCGGACACGAACGGATATTCCAAGCCACTGACCAAGCTCTCTCAGACCTTATCCAACAACTTCTCCGATCTCACAAGCCAACTGGCTGATCTCGACAGTAGCAATAGCCTTGACAAGAACTCGAACCAAAGCGCTCAGCAGCAGCAGCAGCAGCAGACGGAGTCTAACAATTACCATGAGCTAATGAGGAAGCATTCGAGGAGGCAGCATTATTCATGGCCGCCTCTACAGGTTGATGCTTTTGAGGAAGAGGGTTCTTCCGGCGACTTCTTGCCACGGATGAAGGCGTTGGAAAGCACTGCGGCGTTGTCCCTGGCCAACTTCACTTCCTTGCTGATAGAGTTTGTGGCCAGGCTTGATCACTTGGTTGAAGCAGTTGATGAGCTGTCCAAGTTAGCCAAGTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005216 GO:0005253 GO:0005310 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0008150 GO:0008509 GO:0008514 GO:0009705 GO:0015075 GO:0015103 GO:0015140 GO:0015267 GO:0015318 GO:0015556 GO:0015698 GO:0015711 GO:0015740 GO:0015743 GO:0015849 GO:0016020 GO:0022803 GO:0022838 GO:0022857 GO:0031090 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0051179 GO:0051234 GO:0055085 GO:0071423 GO:0071702 GO:0098588 GO:0098656 GO:0098805 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ALMT

Protein Analysis

550

Amino Acids

61.48

Weight (kDa)

6.19

Isoelectric Point (pI)

38.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ALMT	PF11744	54 - 544	2.4e-161	Aluminium activated malate transporter
FUSC_2	PF13515	92 - 219	1.9e-11	Fusaric acid resistance protein-like
FUSC	PF04632	96 - 397	7.7e-11	Fusaric acid resistance protein family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016841)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g03620
malus_domestica	MD06G1096000.v1.1 MD14G1116200.v1.1
prunus_persica	Prupe.5G110600_v2.0.a1
pyrus_communis	pycom06g09230
rosa_chinensis	RchiOBHm_Chr7g0196101
rosa_laevigata	RLG00000004065
rosa_multiflora	Rmu_sc0004547.1_g000003
rosa_roxburghii	Rroxscaffold_3G00259820
rosa_rugosa	Rorug07G0030600
rosa_samantha	Rh7AG156300 Rh7BG158000 Rh7DG157300
rosa_wichuraiana	Rw7G013360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	272, 1033
AccII	CGCG	1 cut(s)	1197
AccIII	TCCGGA	1 cut(s)	1047
AciI	CCGC	3 cut(s)	1092, 1463, 1544
AclWI	GGATC	2 cut(s)	618, 1063
AcoI	YGGCCR	6 cut(s)	387, 497, 729, 1460, 1557, 1590
AcsI	RAATTY	4 cut(s)	164, 194, 791, 1026
AfaI	GTAC	1 cut(s)	537
AfeI	AGCGCT	1 cut(s)	1375
AfiI	CCNNNNNNNGG	4 cut(s)	139, 636, 679, 914
AgsI	TTSAA	3 cut(s)	743, 859, 1613
AjiI	CACGTC	1 cut(s)	1207
AjnI	CCWGG	3 cut(s)	1086, 1554, 1592
AjuI	GAANNNNNNNTTGG	2 cut(s)	309, 341
AloI	GAACNNNNNNTCC	2 cut(s)	1244, 1276
AluBI	AGCT	8 cut(s)	359, 417, 431, 706, 1176, 1279, 1423, 1627
AluI	AGCT	8 cut(s)	359, 417, 431, 706, 1176, 1279, 1423, 1627
Alw21I	GWGCWC	5 cut(s)	256, 361, 786, 854, 1212
Alw26I	GTCTC	1 cut(s)	235
Alw44I	GTGCAC	2 cut(s)	782, 1208
AlwI	GGATC	2 cut(s)	618, 1063
Aor13HI	TCCGGA	1 cut(s)	1047
Aor51HI	AGCGCT	1 cut(s)	1375
AoxI	GGCC	8 cut(s)	387, 497, 681, 729, 1089, 1460, 1557, 1590
ApaLI	GTGCAC	2 cut(s)	782, 1208
ApeKI	GCWGC	7 cut(s)	965, 1381, 1384, 1387, 1390, 1393, 1447
ApoI	RAATTY	4 cut(s)	164, 194, 791, 1026
AspLEI	GCGC	2 cut(s)	1199, 1376
AspS9I	GGNCC	2 cut(s)	288, 681
AsuC2I	CCSGG	1 cut(s)	1244
AsuHPI	GGTGA	4 cut(s)	202, 535, 698, 824
AsuII	TTCGAA	1 cut(s)	315
AvaII	GGWCC	1 cut(s)	288
BaeGI	GKGCMC	2 cut(s)	786, 1212
BalI	TGGCCA	4 cut(s)	389, 499, 1559, 1592
BanI	GGYRCC	2 cut(s)	272, 1033
BanII	GRGCYC	2 cut(s)	361, 909
BauI	CACGAG	1 cut(s)	506
Bbv12I	GWGCWC	5 cut(s)	256, 361, 786, 854, 1212
BbvI	GCAGC	7 cut(s)	977, 1393, 1396, 1399, 1402, 1405, 1459
BccI	CCATC	6 cut(s)	299, 314, 508, 577, 638, 767
BceAI	ACGGC	1 cut(s)	931
BciT130I	CCWGG	3 cut(s)	1088, 1556, 1594
BclI	TGATCA	1 cut(s)	1600
BcnI	CCSGG	1 cut(s)	1244
BcoDI	GTCTC	1 cut(s)	235
BfaI	CTAG	3 cut(s)	707, 764, 1112
BfmI	CTRYAG	2 cut(s)	835, 1469
BfoI	RGCGCY	1 cut(s)	1377
BlpI	GCTNAGC	1 cut(s)	1377
Bme1390I	CCNGG	4 cut(s)	1088, 1244, 1556, 1594
Bme18I	GGWCC	1 cut(s)	288
BmgBI	CACGTC	1 cut(s)	1207
BmgT120I	GGNCC	2 cut(s)	288, 681
BmiI	GGNNCC	4 cut(s)	274, 472, 906, 1035
BmrFI	CCNGG	4 cut(s)	1088, 1244, 1556, 1594
BmsI	GCATC	2 cut(s)	465, 1468
BpmI	CTGGAG	1 cut(s)	896
Bpu1102I	GCTNAGC	1 cut(s)	1377
Bpu14I	TTCGAA	1 cut(s)	315
BpuEI	CTTGAG	1 cut(s)	1145
BpuMI	CCSGG	1 cut(s)	1244
Bsa29I	ATCGAT	1 cut(s)	581
BsaBI	GATNNNNATC	1 cut(s)	629
BsaJI	CCNNGG	4 cut(s)	941, 1242, 1517, 1554
BsaWI	WCCGGW	1 cut(s)	1047
BsaXI	ACNNNNNCTCC	4 cut(s)	627, 657, 1289, 1319
Bsc4I	CCNNNNNNNGG	4 cut(s)	139, 636, 679, 914
Bse118I	RCCGGY	1 cut(s)	683
Bse1I	ACTGG	3 cut(s)	879, 1104, 1329
Bse3DI	GCAATG	1 cut(s)	612
Bse8I	GATNNNNATC	1 cut(s)	629
BseAI	TCCGGA	1 cut(s)	1047
BseBI	CCWGG	3 cut(s)	1088, 1556, 1594
BseCI	ATCGAT	1 cut(s)	581
BseDI	CCNNGG	4 cut(s)	941, 1242, 1517, 1554
BseGI	GGATG	5 cut(s)	45, 291, 1056, 1151, 1527
BseJI	GATNNNNATC	1 cut(s)	629
BseLI	CCNNNNNNNGG	4 cut(s)	139, 636, 679, 914
BseMI	GCAATG	1 cut(s)	612
BseMII	CTCAG	3 cut(s)	21, 1298, 1391
BseNI	ACTGG	3 cut(s)	879, 1104, 1329
BseRI	GAGGAG	7 cut(s)	117, 120, 123, 126, 129, 1211, 1456
BseSI	GKGCMC	2 cut(s)	786, 1212
BseXI	GCAGC	7 cut(s)	977, 1393, 1396, 1399, 1402, 1405, 1459
BsgI	GTGCAG	1 cut(s)	1001
Bsh1236I	CGCG	1 cut(s)	1197
Bsh1285I	CGRYCG	1 cut(s)	627
BshFI	GGCC	8 cut(s)	389, 499, 683, 731, 1091, 1462, 1559, 1592
BshNI	GGYRCC	2 cut(s)	272, 1033
BshVI	ATCGAT	1 cut(s)	581
BsiEI	CGRYCG	1 cut(s)	627
BsiHKAI	GWGCWC	5 cut(s)	256, 361, 786, 854, 1212
BsiSI	CCGG	6 cut(s)	378, 684, 847, 1048, 1244, 1503
BslFI	GGGAC	1 cut(s)	1537
BslI	CCNNNNNNNGG	4 cut(s)	139, 636, 679, 914
BsmAI	GTCTC	1 cut(s)	235
BsmFI	GGGAC	1 cut(s)	1537
BsmI	GAATGC	1 cut(s)	1435
BsnI	GGCC	8 cut(s)	389, 499, 683, 731, 1091, 1462, 1559, 1592
Bsp119I	TTCGAA	1 cut(s)	315
Bsp1286I	GDGCHC	6 cut(s)	256, 361, 786, 854, 909, 1212
Bsp13I	TCCGGA	1 cut(s)	1047
Bsp143I	GATC	7 cut(s)	555, 610, 624, 1068, 1309, 1330, 1600
Bsp1720I	GCTNAGC	1 cut(s)	1377
BspACI	CCGC	3 cut(s)	1092, 1463, 1544
BspANI	GGCC	8 cut(s)	389, 499, 683, 731, 1091, 1462, 1559, 1592
BspCNI	CTCAG	3 cut(s)	22, 1297, 1390
BspDI	ATCGAT	1 cut(s)	581
BspEI	TCCGGA	1 cut(s)	1047
BspFNI	CGCG	1 cut(s)	1197
BspHI	TCATGA	1 cut(s)	486
BspLI	GGNNCC	4 cut(s)	274, 472, 906, 1035
BspPI	GGATC	2 cut(s)	618, 1063
BspT104I	TTCGAA	1 cut(s)	315
BspT107I	GGYRCC	2 cut(s)	272, 1033
BsrDI	GCAATG	1 cut(s)	612
BsrFI	RCCGGY	1 cut(s)	683
BsrI	ACTGG	3 cut(s)	879, 1104, 1329
BssAI	RCCGGY	1 cut(s)	683
BssECI	CCNNGG	4 cut(s)	941, 1242, 1517, 1554
BssMI	GATC	7 cut(s)	555, 610, 624, 1068, 1309, 1330, 1600
BssSI	CACGAG	1 cut(s)	506
BssT1I	CCWWGG	1 cut(s)	941
Bst2BI	CACGAG	1 cut(s)	506
Bst2UI	CCWGG	3 cut(s)	1088, 1556, 1594
Bst4CI	ACNGT	4 cut(s)	301, 325, 805, 1340
Bst6I	CTCTTC	2 cut(s)	251, 1485
BstBI	TTCGAA	1 cut(s)	315
BstC8I	GCNNGC	3 cut(s)	216, 375, 831
BstDEI	CTNAG	5 cut(s)	30, 413, 652, 1284, 1377
BstDSI	CCRYGG	1 cut(s)	1517
BstF5I	GGATG	5 cut(s)	45, 291, 1056, 1151, 1527
BstFNI	CGCG	1 cut(s)	1197
BstH2I	RGCGCY	1 cut(s)	1377
BstHHI	GCGC	2 cut(s)	1199, 1376
BstKTI	GATC	7 cut(s)	558, 613, 627, 1071, 1312, 1333, 1603
BstMAI	GTCTC	1 cut(s)	235
BstMBI	GATC	7 cut(s)	555, 610, 624, 1068, 1309, 1330, 1600
BstMCI	CGRYCG	1 cut(s)	627
BstMWI	GCNNNNNNNGC	7 cut(s)	220, 407, 703, 893, 1387, 1390, 1393
BstNI	CCWGG	3 cut(s)	1088, 1556, 1594
BstSCI	CCNGG	4 cut(s)	1086, 1242, 1554, 1592
BstSFI	CTRYAG	2 cut(s)	835, 1469
BstSLI	GKGCMC	2 cut(s)	786, 1212
BstUI	CGCG	1 cut(s)	1197
BstV1I	GCAGC	7 cut(s)	977, 1393, 1396, 1399, 1402, 1405, 1459
BstX2I	RGATCY	1 cut(s)	1068
BstYI	RGATCY	1 cut(s)	1068
Bsu15I	ATCGAT	1 cut(s)	581
BsuRI	GGCC	8 cut(s)	389, 499, 683, 731, 1091, 1462, 1559, 1592
BsuTUI	ATCGAT	1 cut(s)	581
BtgI	CCRYGG	1 cut(s)	1517
BtgZI	GCGATG	1 cut(s)	1212
BtrI	CACGTC	1 cut(s)	1207
BtsCI	GGATG	5 cut(s)	45, 291, 1056, 1151, 1527
BtsI	GCAGTG	2 cut(s)	225, 1539
BtsIMutI	CAGTG	5 cut(s)	200, 225, 786, 1268, 1539
Cac8I	GCNNGC	3 cut(s)	216, 375, 831
CciI	TCATGA	1 cut(s)	486
CfoI	GCGC	2 cut(s)	1199, 1376
Cfr10I	RCCGGY	1 cut(s)	683
Cfr13I	GGNCC	2 cut(s)	288, 681
ClaI	ATCGAT	1 cut(s)	581
Csp6I	GTAC	1 cut(s)	536
CviAII	CATG	8 cut(s)	77, 310, 487, 997, 1007, 1132, 1418, 1458
CviQI	GTAC	1 cut(s)	536
DdeI	CTNAG	5 cut(s)	30, 413, 652, 1284, 1377
DpnI	GATC	7 cut(s)	557, 612, 626, 1070, 1311, 1332, 1602
DpnII	GATC	7 cut(s)	555, 610, 624, 1068, 1309, 1330, 1600
EaeI	YGGCCR	6 cut(s)	387, 497, 729, 1460, 1557, 1590
Eam1104I	CTCTTC	2 cut(s)	251, 1485
EarI	CTCTTC	2 cut(s)	251, 1485
Ecl136II	GAGCTC	1 cut(s)	359
Eco130I	CCWWGG	1 cut(s)	941
Eco24I	GRGCYC	2 cut(s)	361, 909
Eco47I	GGWCC	1 cut(s)	288
Eco47III	AGCGCT	1 cut(s)	1375
Eco53kI	GAGCTC	1 cut(s)	359
EcoICRI	GAGCTC	1 cut(s)	359
EcoRI	GAATTC	1 cut(s)	791
EcoRII	CCWGG	3 cut(s)	1086, 1554, 1592
EcoT14I	CCWWGG	1 cut(s)	941
EcoT38I	GRGCYC	2 cut(s)	361, 909
ErhI	CCWWGG	1 cut(s)	941
FaeI	CATG	8 cut(s)	80, 313, 490, 1000, 1010, 1135, 1421, 1461
FaqI	GGGAC	1 cut(s)	1537
FatI	CATG	8 cut(s)	76, 309, 486, 996, 1006, 1131, 1417, 1457
FauNDI	CATATG	1 cut(s)	514
FbaI	TGATCA	1 cut(s)	1600
FokI	GGATG	5 cut(s)	32, 278, 1063, 1138, 1534
FriOI	GRGCYC	2 cut(s)	361, 909
FspBI	CTAG	3 cut(s)	707, 764, 1112
GlaI	GCGC	2 cut(s)	1198, 1375
GsuI	CTGGAG	1 cut(s)	896
HaeII	RGCGCY	1 cut(s)	1377
HaeIII	GGCC	8 cut(s)	389, 499, 683, 731, 1091, 1462, 1559, 1592
HapII	CCGG	6 cut(s)	378, 684, 847, 1048, 1244, 1503
HhaI	GCGC	2 cut(s)	1199, 1376
Hin1II	CATG	8 cut(s)	80, 313, 490, 1000, 1010, 1135, 1421, 1461
Hin6I	GCGC	2 cut(s)	1197, 1374
HinP1I	GCGC	2 cut(s)	1197, 1374
HinfI	GANTC	7 cut(s)	525, 615, 734, 921, 1108, 1188, 1403
HpaII	CCGG	6 cut(s)	378, 684, 847, 1048, 1244, 1503
HphI	GGTGA	4 cut(s)	202, 535, 698, 824
Hpy166II	GTNNAC	2 cut(s)	784, 1210
Hpy188I	TCNGA	8 cut(s)	251, 470, 635, 949, 1024, 1066, 1287, 1309
Hpy188III	TCNNGA	7 cut(s)	420, 487, 764, 821, 1048, 1162, 1334
Hpy8I	GTNNAC	2 cut(s)	784, 1210
Hpy99I	CGWCG	1 cut(s)	1084
HpyAV	CCTTC	3 cut(s)	92, 119, 1519
HpyCH4III	ACNGT	4 cut(s)	301, 325, 805, 1340
HpyCH4IV	ACGT	1 cut(s)	1206
HpyCH4V	TGCA	6 cut(s)	332, 697, 784, 965, 1018, 1210
HpyF10VI	GCNNNNNNNGC	7 cut(s)	220, 407, 703, 893, 1387, 1390, 1393
HpyF3I	CTNAG	5 cut(s)	30, 413, 652, 1284, 1377
HpySE526I	ACGT	1 cut(s)	1206
Hsp92II	CATG	8 cut(s)	80, 313, 490, 1000, 1010, 1135, 1421, 1461
HspAI	GCGC	2 cut(s)	1197, 1374
Kpn2I	TCCGGA	1 cut(s)	1047
Ksp22I	TGATCA	1 cut(s)	1600
Kzo9I	GATC	7 cut(s)	555, 610, 624, 1068, 1309, 1330, 1600
LmnI	GCTCC	4 cut(s)	703, 849, 904, 1183
Lsp1109I	GCAGC	7 cut(s)	977, 1393, 1396, 1399, 1402, 1405, 1459
LweI	GCATC	2 cut(s)	465, 1468
MaeI	CTAG	3 cut(s)	707, 764, 1112
MaeII	ACGT	1 cut(s)	1206
MaeIII	GTNAC	2 cut(s)	58, 1235
MalI	GATC	7 cut(s)	557, 612, 626, 1070, 1311, 1332, 1602
MboI	GATC	7 cut(s)	555, 610, 624, 1068, 1309, 1330, 1600
MfeI	CAATTG	1 cut(s)	692
MflI	RGATCY	1 cut(s)	1068
MhlI	GDGCHC	6 cut(s)	256, 361, 786, 854, 909, 1212
MlsI	TGGCCA	4 cut(s)	389, 499, 1559, 1592
MluCI	AATT	6 cut(s)	164, 194, 692, 791, 1026, 1411
MluNI	TGGCCA	4 cut(s)	389, 499, 1559, 1592
MlyI	GAGTC	5 cut(s)	609, 728, 1117, 1182, 1412
MmeI	TCCRAC	3 cut(s)	1216, 1320, 1512
Mox20I	TGGCCA	4 cut(s)	389, 499, 1559, 1592
MroI	TCCGGA	1 cut(s)	1047
MscI	TGGCCA	4 cut(s)	389, 499, 1559, 1592
MseI	TTAA	6 cut(s)	36, 42, 138, 339, 351, 720
MslI	CAYNNNNRTG	1 cut(s)	1205
Msp20I	TGGCCA	4 cut(s)	389, 499, 1559, 1592
MspI	CCGG	6 cut(s)	378, 684, 847, 1048, 1244, 1503
MspR9I	CCNGG	4 cut(s)	1088, 1244, 1556, 1594
MunI	CAATTG	1 cut(s)	692
Mva1269I	GAATGC	1 cut(s)	1435
MvaI	CCWGG	3 cut(s)	1088, 1556, 1594
MvnI	CGCG	1 cut(s)	1197
MwoI	GCNNNNNNNGC	7 cut(s)	220, 407, 703, 893, 1387, 1390, 1393
NciI	CCSGG	1 cut(s)	1244
NdeI	CATATG	1 cut(s)	514
NdeII	GATC	7 cut(s)	555, 610, 624, 1068, 1309, 1330, 1600
NlaIII	CATG	8 cut(s)	80, 313, 490, 1000, 1010, 1135, 1421, 1461
NlaIV	GGNNCC	4 cut(s)	274, 472, 906, 1035
NmuCI	GTSAC	2 cut(s)	58, 1235
NspV	TTCGAA	1 cut(s)	315
PagI	TCATGA	1 cut(s)	486
PctI	GAATGC	1 cut(s)	1435
PfeI	GAWTC	2 cut(s)	525, 921
PflFI	GACNNNGTC	1 cut(s)	1402
Ple19I	CGATCG	1 cut(s)	627
PleI	GAGTC	5 cut(s)	609, 728, 1116, 1182, 1411
PpsI	GAGTC	5 cut(s)	609, 728, 1116, 1182, 1411
Psp124BI	GAGCTC	1 cut(s)	361
Psp6I	CCWGG	3 cut(s)	1086, 1554, 1592
PspGI	CCWGG	3 cut(s)	1086, 1554, 1592
PspN4I	GGNNCC	4 cut(s)	274, 472, 906, 1035
PspPI	GGNCC	2 cut(s)	288, 681
PsuI	RGATCY	1 cut(s)	1068
PsyI	GACNNNGTC	1 cut(s)	1402
PvuI	CGATCG	1 cut(s)	627
RsaI	GTAC	1 cut(s)	537
RsaNI	GTAC	1 cut(s)	536
RseI	CAYNNNNRTG	1 cut(s)	1205
SacI	GAGCTC	1 cut(s)	361
SaqAI	TTAA	6 cut(s)	36, 42, 138, 339, 351, 720
Sau3AI	GATC	7 cut(s)	555, 610, 624, 1068, 1309, 1330, 1600
Sau96I	GGNCC	2 cut(s)	288, 681
SchI	GAGTC	5 cut(s)	609, 728, 1117, 1182, 1412
ScrFI	CCNGG	4 cut(s)	1088, 1244, 1556, 1594
SduI	GDGCHC	6 cut(s)	256, 361, 786, 854, 909, 1212
SfaNI	GCATC	2 cut(s)	465, 1468
SfcI	CTRYAG	2 cut(s)	835, 1469
SfuI	TTCGAA	1 cut(s)	315
SinI	GGWCC	1 cut(s)	288
SmiMI	CAYNNNNRTG	1 cut(s)	1205
SmlI	CTYRAG	1 cut(s)	1160
SmoI	CTYRAG	1 cut(s)	1160
Sse9I	AATT	6 cut(s)	164, 194, 692, 791, 1026, 1411
SsiI	CCGC	3 cut(s)	1092, 1463, 1544
SspMI	CTAG	3 cut(s)	707, 764, 1112
SstI	GAGCTC	1 cut(s)	361
StyD4I	CCNGG	4 cut(s)	1086, 1242, 1554, 1592
StyI	CCWWGG	1 cut(s)	941
TaaI	ACNGT	4 cut(s)	301, 325, 805, 1340
TaiI	ACGT	1 cut(s)	1209
TaqI	TCGA	7 cut(s)	315, 581, 613, 623, 1335, 1364, 1439
TasI	AATT	6 cut(s)	164, 194, 692, 791, 1026, 1411
TauI	GCSGC	3 cut(s)	1094, 1465, 1547
TfiI	GAWTC	2 cut(s)	525, 921
Tru1I	TTAA	6 cut(s)	36, 42, 138, 339, 351, 720
Tru9I	TTAA	6 cut(s)	36, 42, 138, 339, 351, 720
TscAI	CASTG	5 cut(s)	207, 225, 786, 1275, 1546
TseFI	GTSAC	2 cut(s)	58, 1235
TseI	GCWGC	7 cut(s)	965, 1381, 1384, 1387, 1390, 1393, 1447
Tsp45I	GTSAC	2 cut(s)	58, 1235
TspDTI	ATGAA	9 cut(s)	17, 276, 475, 503, 531, 995, 1148, 1446, 1538
TspGWI	ACGGA	4 cut(s)	1196, 1269, 1415, 1534
TspRI	CASTG	5 cut(s)	207, 225, 786, 1275, 1546
Tth111I	GACNNNGTC	1 cut(s)	1402
VneI	GTGCAC	2 cut(s)	782, 1208
VpaK11BI	GGWCC	1 cut(s)	288
XapI	RAATTY	4 cut(s)	164, 194, 791, 1026
XbaI	TCTAGA	1 cut(s)	763
XcmI	CCANNNNNNNNNTGG	1 cut(s)	805
XspI	CTAG	3 cut(s)	707, 764, 1112

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.