MD07G1023500.v1.1
ERF Family

Belongs to the AB hydrolase superfamily. Lipase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
1949924 .. 1952212
2289 bp
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UTR
Exon/CDS
Intron
MD07G1023500.v1.1.491

Sequence Viewer

Length: 165 bp
ATGGTGCGCTGCATATATTTGACAACAAGCTCCAAAGTCTTTGTTGTTGGACATTCACAGGGAACAATCATGTCCTTAACTGCTCTCAGCCAGCCAGATATAGCAGAACTAGTTGAAGTTGCCGCTCTTTTCTGTCCAATATCATACTTGGAGCATCACTTCTAA

Protein Analysis

55

Amino Acids

5.95

Weight (kDa)

5.75

Isoelectric Point (pI)

26.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028882)

Species Orthologous Gene IDs
malus_domestica MD07G1023500.v1.1
pyrus_communis pycom02g26330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 125
AciI CCGC 1 cut(s) 123
AgsI TTSAA 1 cut(s) 116
AhlI ACTAGT 1 cut(s) 109
AluBI AGCT 1 cut(s) 30
AluI AGCT 1 cut(s) 30
ApeKI GCWGC 1 cut(s) 9
AspLEI GCGC 1 cut(s) 9
BcuI ACTAGT 1 cut(s) 109
BfaI CTAG 1 cut(s) 110
BisI GCNGC 2 cut(s) 10, 123
BlsI GCNGC 2 cut(s) 11, 124
BseMII CTCAG 1 cut(s) 100
BspACI CCGC 1 cut(s) 123
BspCNI CTCAG 1 cut(s) 99
BsrBI CCGCTC 1 cut(s) 125
BstC8I GCNNGC 1 cut(s) 92
BstDEI CTNAG 1 cut(s) 86
BstHHI GCGC 1 cut(s) 9
Cac8I GCNNGC 1 cut(s) 92
CfoI GCGC 1 cut(s) 9
CviAII CATG 1 cut(s) 70
CviJI RGCY 3 cut(s) 30, 90, 94
CviKI_1 RGCY 3 cut(s) 30, 90, 94
DdeI CTNAG 1 cut(s) 86
FaeI CATG 1 cut(s) 73
FaiI YATR 5 cut(s) 14, 16, 71, 101, 145
FatI CATG 1 cut(s) 69
Fnu4HI GCNGC 2 cut(s) 10, 123
Fsp4HI GCNGC 2 cut(s) 10, 123
FspBI CTAG 1 cut(s) 110
GlaI GCGC 1 cut(s) 8
GluI GCNGC 2 cut(s) 10, 123
HhaI GCGC 1 cut(s) 9
Hin1II CATG 1 cut(s) 73
Hin6I GCGC 1 cut(s) 7
HinP1I GCGC 1 cut(s) 7
HpyCH4V TGCA 1 cut(s) 12
HpyF3I CTNAG 1 cut(s) 86
Hsp92II CATG 1 cut(s) 73
HspAI GCGC 1 cut(s) 7
LmnI GCTCC 2 cut(s) 35, 151
LpnPI CCDG 3 cut(s) 44, 104, 108
MaeI CTAG 1 cut(s) 110
MbiI CCGCTC 1 cut(s) 125
MmeI TCCRAC 1 cut(s) 28
MseI TTAA 1 cut(s) 77
NlaIII CATG 1 cut(s) 73
PkrI GCNGC 2 cut(s) 11, 124
SaqAI TTAA 1 cut(s) 77
SatI GCNGC 2 cut(s) 10, 123
SetI ASST 1 cut(s) 32
SgeI CNNG 7 cut(s) 39, 71, 82, 103, 107, 122, 160
SpeI ACTAGT 1 cut(s) 109
SsiI CCGC 1 cut(s) 123
SspMI CTAG 1 cut(s) 110
TauI GCSGC 1 cut(s) 125
Tru1I TTAA 1 cut(s) 77
Tru9I TTAA 1 cut(s) 77
TseI GCWGC 1 cut(s) 9
XspI CTAG 1 cut(s) 110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.