MD07G1235800.v1.1
HSP70 Family

Heat shock cognate 70 kDa

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Forward (+)
30899302 .. 30901751
2450 bp
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UTR
Exon/CDS
Intron
MD07G1235800.v1.1.491

Sequence Viewer

Length: 210 bp
ATGCTCCAGCTCAATAACAAATCAGACATCAGCCCACTTTTGGTGTGCCTGCGAATGTTGATTCGGCGATGCGTTGACAATAACATCAAGAGGGAGAGATTCAAAAGATGTTCCCAGTGTAGCTGTTTCAGAGTTGAAGAGGATGTTGATGCTTTTGCTGCAGAAGTTTCAGCAAGAATGACGGCGAGATGCACACAAGGATCAGGTTAG
Functional Annotation

Protein Analysis

70

Amino Acids

7.89

Weight (kDa)

8.93

Isoelectric Point (pI)

62.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028885)

Species Orthologous Gene IDs
malus_domestica MD07G1235800.v1.1 MD07G1236400.v1.1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 208
AfiI CCNNNNNNNGG 1 cut(s) 40
AgsI TTSAA 2 cut(s) 103, 137
AluBI AGCT 2 cut(s) 10, 123
AluI AGCT 2 cut(s) 10, 123
AlwI GGATC 1 cut(s) 208
ApeKI GCWGC 1 cut(s) 158
BbvI GCAGC 1 cut(s) 145
BceAI ACGGC 1 cut(s) 198
BfmI CTRYAG 1 cut(s) 159
BisI GCNGC 1 cut(s) 159
BlsI GCNGC 1 cut(s) 160
BmrI ACTGGG 1 cut(s) 109
BmsI GCATC 3 cut(s) 59, 139, 179
BmuI ACTGGG 1 cut(s) 109
Bsc4I CCNNNNNNNGG 1 cut(s) 40
Bse1I ACTGG 1 cut(s) 115
BseGI GGATG 1 cut(s) 148
BseLI CCNNNNNNNGG 1 cut(s) 40
BseNI ACTGG 1 cut(s) 115
BseXI GCAGC 1 cut(s) 145
BslI CCNNNNNNNGG 1 cut(s) 40
Bsp143I GATC 1 cut(s) 200
BspMAI CTGCAG 1 cut(s) 163
BspPI GGATC 1 cut(s) 208
BsrI ACTGG 1 cut(s) 115
BssMI GATC 1 cut(s) 200
Bst6I CTCTTC 1 cut(s) 132
BstC8I GCNNGC 1 cut(s) 50
BstF5I GGATG 1 cut(s) 148
BstKTI GATC 1 cut(s) 203
BstMBI GATC 1 cut(s) 200
BstMWI GCNNNNNNNGC 1 cut(s) 158
BstSFI CTRYAG 1 cut(s) 159
BstV1I GCAGC 1 cut(s) 145
BtgZI GCGATG 1 cut(s) 82
BtsCI GGATG 1 cut(s) 148
BtsIMutI CAGTG 1 cut(s) 122
Cac8I GCNNGC 1 cut(s) 50
CviJI RGCY 3 cut(s) 10, 33, 123
CviKI_1 RGCY 3 cut(s) 10, 33, 123
DpnI GATC 1 cut(s) 202
DpnII GATC 1 cut(s) 200
Eam1104I CTCTTC 1 cut(s) 132
EarI CTCTTC 1 cut(s) 132
Fnu4HI GCNGC 1 cut(s) 159
FokI GGATG 1 cut(s) 155
Fsp4HI GCNGC 1 cut(s) 159
GluI GCNGC 1 cut(s) 159
HincII GTYRAC 1 cut(s) 76
HindII GTYRAC 1 cut(s) 76
HinfI GANTC 2 cut(s) 61, 99
Hpy166II GTNNAC 1 cut(s) 76
Hpy188I TCNGA 2 cut(s) 25, 131
Hpy188III TCNNGA 1 cut(s) 88
Hpy8I GTNNAC 1 cut(s) 76
HpyCH4V TGCA 2 cut(s) 161, 192
HpyF10VI GCNNNNNNNGC 1 cut(s) 158
Kzo9I GATC 1 cut(s) 200
LmnI GCTCC 1 cut(s) 9
LpnPI CCDG 4 cut(s) 20, 62, 128, 189
Lsp1109I GCAGC 1 cut(s) 145
LweI GCATC 3 cut(s) 59, 139, 179
MalI GATC 1 cut(s) 202
MboI GATC 1 cut(s) 200
MboII GAAGA 1 cut(s) 149
MnlI CCTC 2 cut(s) 84, 133
MwoI GCNNNNNNNGC 1 cut(s) 158
NdeII GATC 1 cut(s) 200
PfeI GAWTC 2 cut(s) 61, 99
PkrI GCNGC 1 cut(s) 160
PstI CTGCAG 1 cut(s) 163
SatI GCNGC 1 cut(s) 159
Sau3AI GATC 1 cut(s) 200
SetI ASST 3 cut(s) 12, 125, 208
SfaNI GCATC 3 cut(s) 59, 139, 179
SfcI CTRYAG 1 cut(s) 159
SgeI CNNG 6 cut(s) 19, 61, 100, 127, 186, 198
TfiI GAWTC 2 cut(s) 61, 99
TscAI CASTG 1 cut(s) 122
TseI GCWGC 1 cut(s) 158
TspRI CASTG 1 cut(s) 122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.