MD08G1109200.v1.1

Calcineurin-binding protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Reverse (-)
9616957 .. 9618267
1311 bp
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UTR
Exon/CDS
Intron
MD08G1109200.v1.1.491

Sequence Viewer

Length: 336 bp
ATGGTGATATGTCCAGATTTATTAAAAAAAACGTCAAATAACTATGGTGCTTTCCCTGTGGCTCATTTGCTTTTAGAGGAGGCTGCTAGTAGAGGTCTCTTGTATCAGAGACCTATGGATGTTGATGTTTATTTGAATTGCCATCAGCGGAAATTGCAAATCCTTATTGCAGCTGCAGGGATTGGTGAATGCCTTGATTCCTGTAAATCCTTACTATTGAAATCAGGATCAAACATTCGCTATGCTTCTGGCATAGACACACAAGAAAGTTCAAGCAAGCAGTGCTGGAATTTATTGGTTGCCGAGGAAGTGAAGGCTATAGTGTTTCCCAAGTGA

Protein Analysis

112

Amino Acids

12.23

Weight (kDa)

7.61

Isoelectric Point (pI)

46.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028640)

Species Orthologous Gene IDs
malus_domestica MD08G1109200.v1.1
pyrus_communis pycom08g09160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 148
AclWI GGATC 1 cut(s) 235
AcsI RAATTY 1 cut(s) 289
AgsI TTSAA 3 cut(s) 136, 220, 273
AluBI AGCT 1 cut(s) 173
AluI AGCT 1 cut(s) 173
Alw26I GTCTC 2 cut(s) 101, 103
AlwI GGATC 1 cut(s) 235
ApeKI GCWGC 3 cut(s) 83, 170, 173
ApoI RAATTY 1 cut(s) 289
AsuHPI GGTGA 2 cut(s) 16, 197
BbvI GCAGC 3 cut(s) 70, 160, 182
BccI CCATC 1 cut(s) 150
BcoDI GTCTC 2 cut(s) 101, 103
BfaI CTAG 1 cut(s) 87
BfmI CTRYAG 2 cut(s) 174, 318
BisI GCNGC 3 cut(s) 84, 171, 174
BlsI GCNGC 3 cut(s) 85, 172, 175
BsaI GGTCTC 2 cut(s) 101, 103
BsaJI CCNNGG 1 cut(s) 303
BseDI CCNNGG 1 cut(s) 303
BseGI GGATG 1 cut(s) 124
BseRI GAGGAG 1 cut(s) 92
BseXI GCAGC 3 cut(s) 70, 160, 182
BsmAI GTCTC 2 cut(s) 101, 103
BsmI GAATGC 1 cut(s) 194
Bso31I GGTCTC 2 cut(s) 101, 103
Bsp143I GATC 1 cut(s) 227
BspACI CCGC 1 cut(s) 148
BspMAI CTGCAG 1 cut(s) 178
BspPI GGATC 1 cut(s) 235
BspTNI GGTCTC 2 cut(s) 101, 103
BssECI CCNNGG 1 cut(s) 303
BssMI GATC 1 cut(s) 227
BstAPI GCANNNNNTGC 1 cut(s) 282
BstC8I GCNNGC 1 cut(s) 278
BstF5I GGATG 1 cut(s) 124
BstKTI GATC 1 cut(s) 230
BstMAI GTCTC 2 cut(s) 101, 103
BstMBI GATC 1 cut(s) 227
BstMWI GCNNNNNNNGC 2 cut(s) 154, 282
BstSFI CTRYAG 2 cut(s) 174, 318
BstV1I GCAGC 3 cut(s) 70, 160, 182
BtsCI GGATG 1 cut(s) 124
BtsI GCAGTG 1 cut(s) 287
BtsIMutI CAGTG 1 cut(s) 287
Cac8I GCNNGC 1 cut(s) 278
CviJI RGCY 4 cut(s) 62, 83, 173, 317
CviKI_1 RGCY 4 cut(s) 62, 83, 173, 317
DpnI GATC 1 cut(s) 229
DpnII GATC 1 cut(s) 227
Eco31I GGTCTC 2 cut(s) 101, 103
FaiI YATR 6 cut(s) 10, 45, 116, 243, 254, 320
Fnu4HI GCNGC 3 cut(s) 84, 171, 174
FokI GGATG 1 cut(s) 131
Fsp4HI GCNGC 3 cut(s) 84, 171, 174
FspBI CTAG 1 cut(s) 87
GluI GCNGC 3 cut(s) 84, 171, 174
HinfI GANTC 1 cut(s) 197
HphI GGTGA 2 cut(s) 16, 197
Hpy188I TCNGA 1 cut(s) 108
Hpy188III TCNNGA 2 cut(s) 14, 225
HpyAV CCTTC 1 cut(s) 307
HpyCH4IV ACGT 1 cut(s) 32
HpyCH4V TGCA 3 cut(s) 157, 170, 176
HpyF10VI GCNNNNNNNGC 2 cut(s) 154, 282
HpySE526I ACGT 1 cut(s) 32
Kzo9I GATC 1 cut(s) 227
LpnPI CCDG 7 cut(s) 27, 69, 162, 210, 214, 234, 271
Lsp1109I GCAGC 3 cut(s) 70, 160, 182
MaeI CTAG 1 cut(s) 87
MaeII ACGT 1 cut(s) 32
MalI GATC 1 cut(s) 229
MboI GATC 1 cut(s) 227
MluCI AATT 3 cut(s) 136, 152, 289
MnlI CCTC 4 cut(s) 70, 73, 86, 298
MseI TTAA 1 cut(s) 23
MspA1I CMGCKG 2 cut(s) 148, 173
Mva1269I GAATGC 1 cut(s) 194
MwoI GCNNNNNNNGC 2 cut(s) 154, 282
NdeII GATC 1 cut(s) 227
NmeAIII GCCGAG 1 cut(s) 328
PctI GAATGC 1 cut(s) 194
PfeI GAWTC 1 cut(s) 197
PkrI GCNGC 3 cut(s) 85, 172, 175
PstI CTGCAG 1 cut(s) 178
PvuII CAGCTG 1 cut(s) 173
SaqAI TTAA 1 cut(s) 23
SatI GCNGC 3 cut(s) 84, 171, 174
Sau3AI GATC 1 cut(s) 227
SetI ASST 4 cut(s) 35, 97, 115, 175
SfcI CTRYAG 2 cut(s) 174, 318
Sse9I AATT 3 cut(s) 136, 152, 289
SsiI CCGC 1 cut(s) 148
SspMI CTAG 1 cut(s) 87
TaiI ACGT 1 cut(s) 35
TasI AATT 3 cut(s) 136, 152, 289
TfiI GAWTC 1 cut(s) 197
Tru1I TTAA 1 cut(s) 23
Tru9I TTAA 1 cut(s) 23
TscAI CASTG 1 cut(s) 287
TseI GCWGC 3 cut(s) 83, 170, 173
TspRI CASTG 1 cut(s) 287
XapI RAATTY 1 cut(s) 289
XspI CTAG 1 cut(s) 87
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.