MD10G1057200.v1.1

No description available

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
7799428 .. 7799723
296 bp
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UTR
Exon/CDS
Intron
MD10G1057200.v1.1.491

Sequence Viewer

Length: 147 bp
ATGCAGTGTAAAAAGGTCAATCTACATCATCCAAGGTTAGTTCTAATGATGAATGTGGTATTGAGGTTCGGTTCATTTGGAAAAGAGGTCAGTCATCAAGGCTGGACGAGTGGAACTCCGAAAGAAACAGAGGACTTCATTCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

49

Amino Acids

5.54

Weight (kDa)

9.1

Isoelectric Point (pI)

8.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028185)

Species Orthologous Gene IDs
malus_domestica MD10G1057200.v1.1
pyrus_communis pycom10g04410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
BplI GAGNNNNNCTC 2 cut(s) 100, 132
BsaJI CCNNGG 1 cut(s) 32
BseDI CCNNGG 1 cut(s) 32
BseGI GGATG 1 cut(s) 28
BssECI CCNNGG 1 cut(s) 32
BssT1I CCWWGG 1 cut(s) 32
BstF5I GGATG 1 cut(s) 28
BtsCI GGATG 1 cut(s) 28
BtsI GCAGTG 1 cut(s) 11
BtsIMutI CAGTG 1 cut(s) 11
CviJI RGCY 1 cut(s) 102
CviKI_1 RGCY 1 cut(s) 102
Eco130I CCWWGG 1 cut(s) 32
EcoT14I CCWWGG 1 cut(s) 32
ErhI CCWWGG 1 cut(s) 32
FokI GGATG 1 cut(s) 15
Hpy188I TCNGA 1 cut(s) 120
HpyCH4V TGCA 1 cut(s) 4
LpnPI CCDG 1 cut(s) 88
MnlI CCTC 3 cut(s) 57, 79, 124
SetI ASST 4 cut(s) 18, 38, 68, 90
SgeI CNNG 4 cut(s) 45, 110, 115, 120
StyI CCWWGG 1 cut(s) 32
TspDTI ATGAA 3 cut(s) 63, 65, 127
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.