MD10G1111200.v1.1

UDP-glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0028223
Physical Location & Seq
Forward (+)
18268573 .. 18268839
267 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1111200.v1.1.491

Sequence Viewer

Length: 267 bp
ATGGTGGAGCTGGCTTGGGGCTTAAGGAAGAGCAAAAGTAGTTTCTTGTGGGTGGTTAGAGAATCAAAAGCAGCCAATGTCCCAAAAAGGTTTATCGAGGAGACATCCGAGAAGGGTTTAGTGGTCTCGTGGTGCCCCCAAATGGAGGTTTTGGCTCACAACACGGTTGGATGCTTCATCACACATTGCGGTTGGAACTCGACTTTGAAGGCATTGAGTTTGGGGGTTCCGATGGGGCATTGCCACTATGGAGTGACCAGCGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007154 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009072 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009636 GO:0009651 GO:0009653 GO:0009696 GO:0009719 GO:0009725 GO:0009737 GO:0009850 GO:0009987 GO:0009991 GO:0010016 GO:0010029 GO:0010030 GO:0010033 GO:0010035 GO:0010817 GO:0016740 GO:0016757 GO:0016758 GO:0016999 GO:0017144 GO:0018874 GO:0018958 GO:0019752 GO:0031668 GO:0032501 GO:0032502 GO:0032787 GO:0032870 GO:0033554 GO:0033993 GO:0034599 GO:0034614 GO:0034641 GO:0035251 GO:0035690 GO:0042221 GO:0042430 GO:0042445 GO:0042493 GO:0042537 GO:0042538 GO:0042542 GO:0042631 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046482 GO:0046483 GO:0046527 GO:0046677 GO:0048367 GO:0048518 GO:0048580 GO:0048582 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051094 GO:0051239 GO:0051240 GO:0051716 GO:0052638 GO:0052639 GO:0052640 GO:0052641 GO:0065007 GO:0065008 GO:0070301 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071236 GO:0071310 GO:0071396 GO:0071462 GO:0071470 GO:0071472 GO:0071474 GO:0071475 GO:0071495 GO:0071496 GO:0071704 GO:0080002 GO:0080024 GO:0080043 GO:0080044 GO:0080167 GO:0090704 GO:0097237 GO:0097305 GO:0097306 GO:0104004 GO:1900140 GO:1901360 GO:1901564 GO:1901615 GO:1901700 GO:1901701 GO:2000026
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

89

Amino Acids

9.76

Weight (kDa)

8.82

Isoelectric Point (pI)

46.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 3 - 78 2.3e-14 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0028223)

Species Orthologous Gene IDs
malus_domestica MD10G1111200.v1.1
rosa_chinensis RchiOBHm_Chr6g0248131

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 132
AciI CCGC 1 cut(s) 189
AfiI CCNNNNNNNGG 2 cut(s) 142, 145
AflII CTTAAG 1 cut(s) 22
AgsI TTSAA 1 cut(s) 208
AluBI AGCT 1 cut(s) 10
AluI AGCT 1 cut(s) 10
Alw26I GTCTC 2 cut(s) 95, 130
ApeKI GCWGC 1 cut(s) 71
BaeGI GKGCMC 1 cut(s) 137
BanI GGYRCC 1 cut(s) 132
BauI CACGAG 1 cut(s) 127
BbvI GCAGC 1 cut(s) 83
BccI CCATC 1 cut(s) 226
BcoDI GTCTC 2 cut(s) 95, 130
BfrI CTTAAG 1 cut(s) 22
BisI GCNGC 1 cut(s) 72
BlsI GCNGC 1 cut(s) 73
BmiI GGNNCC 2 cut(s) 134, 228
BmsI GCATC 1 cut(s) 161
BsaI GGTCTC 1 cut(s) 130
Bsc4I CCNNNNNNNGG 2 cut(s) 142, 145
Bse3DI GCAATG 2 cut(s) 184, 238
BseGI GGATG 2 cut(s) 104, 176
BseLI CCNNNNNNNGG 2 cut(s) 142, 145
BseMI GCAATG 2 cut(s) 184, 238
BseRI GAGGAG 1 cut(s) 113
BseSI GKGCMC 1 cut(s) 137
BseXI GCAGC 1 cut(s) 83
BshNI GGYRCC 1 cut(s) 132
BslFI GGGAC 1 cut(s) 65
BslI CCNNNNNNNGG 2 cut(s) 142, 145
BsmAI GTCTC 2 cut(s) 95, 130
BsmFI GGGAC 1 cut(s) 65
Bso31I GGTCTC 1 cut(s) 130
Bsp1286I GDGCHC 1 cut(s) 137
BspACI CCGC 1 cut(s) 189
BspLI GGNNCC 2 cut(s) 134, 228
BspQI GCTCTTC 1 cut(s) 23
BspT107I GGYRCC 1 cut(s) 132
BspTI CTTAAG 1 cut(s) 22
BspTNI GGTCTC 1 cut(s) 130
BsrDI GCAATG 2 cut(s) 184, 238
BssSI CACGAG 1 cut(s) 127
Bst2BI CACGAG 1 cut(s) 127
Bst4CI ACNGT 1 cut(s) 166
Bst6I CTCTTC 1 cut(s) 23
BstAFI CTTAAG 1 cut(s) 22
BstC8I GCNNGC 1 cut(s) 12
BstF5I GGATG 2 cut(s) 104, 176
BstMAI GTCTC 2 cut(s) 95, 130
BstSLI GKGCMC 1 cut(s) 137
BstV1I GCAGC 1 cut(s) 83
BtsCI GGATG 2 cut(s) 104, 176
Cac8I GCNNGC 1 cut(s) 12
CviJI RGCY 5 cut(s) 10, 14, 21, 74, 155
CviKI_1 RGCY 5 cut(s) 10, 14, 21, 74, 155
Eam1104I CTCTTC 1 cut(s) 23
EarI CTCTTC 1 cut(s) 23
Eco31I GGTCTC 1 cut(s) 130
FaiI YATR 2 cut(s) 249, 265
FaqI GGGAC 1 cut(s) 65
Fnu4HI GCNGC 1 cut(s) 72
FokI GGATG 2 cut(s) 91, 183
Fsp4HI GCNGC 1 cut(s) 72
GluI GCNGC 1 cut(s) 72
HinfI GANTC 1 cut(s) 62
Hpy188I TCNGA 2 cut(s) 109, 231
HpyAV CCTTC 2 cut(s) 106, 202
HpyCH4III ACNGT 1 cut(s) 166
LguI GCTCTTC 1 cut(s) 23
LmnI GCTCC 1 cut(s) 7
Lsp1109I GCAGC 1 cut(s) 83
LweI GCATC 1 cut(s) 161
MaeIII GTNAC 1 cut(s) 253
MboII GAAGA 1 cut(s) 40
MhlI GDGCHC 1 cut(s) 137
MmeI TCCRAC 2 cut(s) 148, 173
MnlI CCTC 2 cut(s) 91, 139
MseI TTAA 1 cut(s) 23
MspCI CTTAAG 1 cut(s) 22
NlaIV GGNNCC 2 cut(s) 134, 228
NmuCI GTSAC 1 cut(s) 253
PciSI GCTCTTC 1 cut(s) 23
PfeI GAWTC 1 cut(s) 62
PkrI GCNGC 1 cut(s) 73
PspN4I GGNNCC 2 cut(s) 134, 228
SapI GCTCTTC 1 cut(s) 23
SaqAI TTAA 1 cut(s) 23
SatI GCNGC 1 cut(s) 72
SduI GDGCHC 1 cut(s) 137
SetI ASST 3 cut(s) 12, 92, 150
SfaNI GCATC 1 cut(s) 161
SgeI CNNG 9 cut(s) 23, 27, 58, 109, 121, 139, 141, 175, 211
SmlI CTYRAG 1 cut(s) 22
SmoI CTYRAG 1 cut(s) 22
SsiI CCGC 1 cut(s) 189
TaaI ACNGT 1 cut(s) 166
TaqI TCGA 2 cut(s) 96, 200
TfiI GAWTC 1 cut(s) 62
Tru1I TTAA 1 cut(s) 23
Tru9I TTAA 1 cut(s) 23
TseFI GTSAC 1 cut(s) 253
TseI GCWGC 1 cut(s) 71
Tsp45I GTSAC 1 cut(s) 253
TspDTI ATGAA 1 cut(s) 166
Vha464I CTTAAG 1 cut(s) 22
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.