MD10G1132900.v1.1

Lysine histidine transporter-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
21424552 .. 21427704
3153 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1132900.v1.1.491

Sequence Viewer

Length: 1575 bp
ATGTCTGAAACAGGAGGTGATGAGATAACCCCAGCCCCAATAACACCGGGGCCGCCTATGCCACCTACAGAAGATCCTCCAGCGTCTAAGTCTCGGGTACAACCACTGCTGATCCCTGCTTCAACCACCACCACCGGTGGTGGTGACCAGATAACACTAAAAACCCCGAAAACTTTAACCCCAAAGTCTCGTACTCCACGGTTCATGACACCAATAGGGAGCCCCGTTAGGAGGGCTTTCCACCTCACAAGGCTTGACCCTCAAGATGCTTGGCTTCCAATCACTGAATCTAGGAACGGTAACGCTTACTATGCTGCCTTCCACACTCTTTGTTCTGGTATTGGAATTCAATCTCTTGTGCTTCCTGTGGCCTTTCCTTATCTTGGGTGGACATGGGGTGTTATATGTATGACTTTGGCATTCATATGGCAACTTTACACTTTATACTTGCTGGTCCAACTTCATGAATCTCCTGAAACTGGCATCCGTTATTGCAGATACATTCAACTTTGCAATGCAACTTTTGGTGAGAAGTTATCGAAGTTCTTGGCCTTATTCCCGATTTTGTACCTATCGGGCGGCACGTGCGTGGCTCTGATTGTCCTCGGAGGAGCAACATCAAAGTCGTTCTTCCAAATTGTGTGTGGAGCTACATGCACTGCAAGGCCATTGACACCAGCAGAGTGGTACTTGGTGTTTACATGCGCCGCAGTGATTCTGTCGCAGCTACCAAACTTGAACTCCATTGCCGGAGTGTCTCTTGTTGGTGCCATCACAGCTATTGGCTACTGCACAATCATATGGGTTGTGTCTGTGGATAAGGGTAGACTTCCTCATGTGTCTTATGATCCCTTGAAATCCAACAAAAACCTCATTCACTTTTTTGATATTCTCAATGCACTTGGAATGATTGCCTTTGCCTTCAGAGGCCACAACCTTATACTTGAGATTCAGGCCACAATGCCATCCAATGAAAAACATCCATCACGCGTGCCAATGTGGAGGGGTGTCCAAATTTCATACACTCTCATAGCAATGTGCCTTTTCCCCCTTGCAATTGGAGGCTATTGGGCATATGGTCAGATGATACCACATCAAGGAGGCATGTTTGCGGCCTTGTACGGCTTCCATATGCGTGACACATCCCGATTGGTTCTCGGACTAGCAAGTTTGTTTGTTGTAATCAATGCTTTGTGCTCCTTCCAGATCTATGGCATGCCGATGTTTGACGAGATGGAGTCACAATACACTAGGAGGTTTAAGAAGGCAGCTCCATGGTGGCTTAGGGCTATCATGAGAGCTATGTATGCTTATGGATGCTACTTCTTAGCCGTGGCCGTACCTTTCTTGGGAAGCATAGCTGGTTTGCTAGGAGGGATATCATTGCCGGTGACATTAGCATATCCATGTTTCATGTGGCTAAAGATCAAGAAACCCAAGAAGTACAGTCTAAGTTGGTGGGTAAATTGGGTATTAGGGACTGTGGGAATTCTTTTAAGTATCCTGTTGATTGCTGCTGGTGTTTATGTTATAATTGACACTGGTATTACAGTGAGCTTTTTCAAGCCTCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

525

Amino Acids

57.76

Weight (kDa)

9.27

Isoelectric Point (pI)

34.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 99 - 512 1.2e-65 Transmembrane amino acid transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014659)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1532
AccB1I GGYRCC 1 cut(s) 767
AccI GTMKAC 1 cut(s) 826
AccII CGCG 1 cut(s) 990
AciI CCGC 4 cut(s) 53, 579, 708, 1112
AclWI GGATC 3 cut(s) 68, 106, 842
AcoI YGGCCR 1 cut(s) 1335
AcsI RAATTY 3 cut(s) 345, 1014, 1488
AcuI CTGAAG 1 cut(s) 907
AcvI CACGTG 1 cut(s) 585
AfaI GTAC 7 cut(s) 99, 193, 569, 689, 1121, 1341, 1445
AfiI CCNNNNNNNGG 5 cut(s) 231, 383, 479, 1097, 1349
AflIII ACRYGT 1 cut(s) 988
AgeI ACCGGT 1 cut(s) 134
AgsI TTSAA 6 cut(s) 123, 350, 506, 739, 856, 1564
AleI CACNNNNGTG 1 cut(s) 587
AluBI AGCT 7 cut(s) 650, 727, 779, 1271, 1301, 1361, 1557
AluI AGCT 7 cut(s) 650, 727, 779, 1271, 1301, 1361, 1557
Alw21I GWGCWC 1 cut(s) 1199
Alw26I GTCTC 3 cut(s) 96, 192, 762
AlwI GGATC 3 cut(s) 68, 106, 842
Ama87I CYCGRG 1 cut(s) 93
AoxI GGCC 8 cut(s) 50, 369, 549, 665, 928, 954, 1113, 1335
ApeKI GCWGC 4 cut(s) 314, 724, 1268, 1514
ApoI RAATTY 3 cut(s) 345, 1014, 1488
AsiGI ACCGGT 1 cut(s) 134
AspLEI GCGC 1 cut(s) 707
AspS9I GGNCC 2 cut(s) 50, 454
AsuC2I CCSGG 1 cut(s) 48
AsuHPI GGTGA 4 cut(s) 29, 155, 539, 1402
AvaI CYCGRG 1 cut(s) 93
AvaII GGWCC 1 cut(s) 454
BanI GGYRCC 1 cut(s) 767
BanII GRGCYC 1 cut(s) 224
BbrPI CACGTG 1 cut(s) 585
Bbv12I GWGCWC 1 cut(s) 1199
BbvI GCAGC 4 cut(s) 301, 736, 1280, 1501
BccI CCATC 4 cut(s) 779, 973, 991, 1228
BceAI ACGGC 3 cut(s) 1138, 1316, 1322
BciVI GTATCC 1 cut(s) 1511
BcnI CCSGG 1 cut(s) 48
BcoDI GTCTC 3 cut(s) 96, 192, 762
BfaI CTAG 4 cut(s) 291, 1163, 1251, 1370
BfmI CTRYAG 1 cut(s) 66
BfuI GTATCC 1 cut(s) 1511
BglII AGATCT 1 cut(s) 1206
BisI GCNGC 8 cut(s) 53, 315, 580, 708, 725, 1113, 1269, 1515
BlsI GCNGC 8 cut(s) 54, 316, 581, 709, 726, 1114, 1270, 1516
Bme1390I CCNGG 1 cut(s) 48
Bme18I GGWCC 1 cut(s) 454
BmeT110I CYCGRG 1 cut(s) 93
BmgT120I GGNCC 2 cut(s) 50, 454
BmiI GGNNCC 3 cut(s) 51, 221, 769
BmrFI CCNGG 1 cut(s) 48
BmsI GCATC 3 cut(s) 256, 492, 1307
BpmI CTGGAG 1 cut(s) 63
Bpu10I CCTNAGC 1 cut(s) 1283
BpuEI CTTGAG 2 cut(s) 246, 965
BpuMI CCSGG 1 cut(s) 48
BsaAI YACGTR 1 cut(s) 585
BsaJI CCNNGG 5 cut(s) 47, 197, 604, 1274, 1332
BsaWI WCCGGW 1 cut(s) 134
BsaXI ACNNNNNCTCC 2 cut(s) 725, 755
Bsc4I CCNNNNNNNGG 5 cut(s) 231, 383, 479, 1097, 1349
Bse118I RCCGGY 2 cut(s) 134, 1387
Bse1I ACTGG 2 cut(s) 484, 1546
Bse3DI GCAATG 4 cut(s) 520, 744, 1041, 1382
BseDI CCNNGG 5 cut(s) 47, 197, 604, 1274, 1332
BseGI GGATG 5 cut(s) 483, 965, 979, 1142, 1322
BseLI CCNNNNNNNGG 5 cut(s) 231, 383, 479, 1097, 1349
BseMI GCAATG 4 cut(s) 520, 744, 1041, 1382
BseNI ACTGG 2 cut(s) 484, 1546
BseRI GAGGAG 1 cut(s) 624
BseXI GCAGC 4 cut(s) 301, 736, 1280, 1501
BseYI CCCAGC 1 cut(s) 31
BsgI GTGCAG 1 cut(s) 775
Bsh1236I CGCG 1 cut(s) 990
BshFI GGCC 8 cut(s) 52, 371, 551, 667, 930, 956, 1115, 1337
BshNI GGYRCC 1 cut(s) 767
BshTI ACCGGT 1 cut(s) 134
BsiHKAI GWGCWC 1 cut(s) 1199
BsiHKCI CYCGRG 1 cut(s) 93
BsiSI CCGG 4 cut(s) 47, 135, 750, 1388
BslFI GGGAC 1 cut(s) 1492
BslI CCNNNNNNNGG 5 cut(s) 231, 383, 479, 1097, 1349
BsmAI GTCTC 3 cut(s) 96, 192, 762
BsmFI GGGAC 1 cut(s) 1492
BsmI GAATGC 1 cut(s) 419
BsnI GGCC 8 cut(s) 52, 371, 551, 667, 930, 956, 1115, 1337
BsoBI CYCGRG 1 cut(s) 93
Bsp1286I GDGCHC 2 cut(s) 224, 1199
Bsp143I GATC 5 cut(s) 73, 111, 847, 1206, 1425
Bsp19I CCATGG 1 cut(s) 1274
BspACI CCGC 4 cut(s) 53, 579, 708, 1112
BspANI GGCC 8 cut(s) 52, 371, 551, 667, 930, 956, 1115, 1337
BspFNI CGCG 1 cut(s) 990
BspHI TCATGA 3 cut(s) 204, 463, 1293
BspLI GGNNCC 3 cut(s) 51, 221, 769
BspPI GGATC 3 cut(s) 68, 106, 842
BspT107I GGYRCC 1 cut(s) 767
BsrDI GCAATG 4 cut(s) 520, 744, 1041, 1382
BsrFI RCCGGY 2 cut(s) 134, 1387
BsrI ACTGG 2 cut(s) 484, 1546
BssAI RCCGGY 2 cut(s) 134, 1387
BssECI CCNNGG 5 cut(s) 47, 197, 604, 1274, 1332
BssMI GATC 5 cut(s) 73, 111, 847, 1206, 1425
BssT1I CCWWGG 1 cut(s) 1274
Bst4CI ACNGT 5 cut(s) 201, 299, 1448, 1483, 1552
BstBAI YACGTR 1 cut(s) 585
BstC8I GCNNGC 2 cut(s) 992, 1217
BstDEI CTNAG 5 cut(s) 87, 1283, 1327, 1451, 1569
BstDSI CCRYGG 3 cut(s) 197, 1274, 1332
BstEII GGTNACC 1 cut(s) 143
BstF5I GGATG 5 cut(s) 483, 965, 979, 1142, 1322
BstFNI CGCG 1 cut(s) 990
BstHHI GCGC 1 cut(s) 707
BstKTI GATC 5 cut(s) 76, 114, 850, 1209, 1428
BstMAI GTCTC 3 cut(s) 96, 192, 762
BstMBI GATC 5 cut(s) 73, 111, 847, 1206, 1425
BstMWI GCNNNNNNNGC 5 cut(s) 58, 311, 585, 776, 1307
BstNSI RCATGY 4 cut(s) 657, 705, 1108, 1219
BstPI GGTNACC 1 cut(s) 143
BstSCI CCNGG 1 cut(s) 46
BstSFI CTRYAG 1 cut(s) 66
BstUI CGCG 1 cut(s) 990
BstV1I GCAGC 4 cut(s) 301, 736, 1280, 1501
BstX2I RGATCY 2 cut(s) 73, 1206
BstXI CCANNNNNNTGG 2 cut(s) 684, 1211
BstYI RGATCY 2 cut(s) 73, 1206
BsuI GTATCC 1 cut(s) 1511
BsuRI GGCC 8 cut(s) 52, 371, 551, 667, 930, 956, 1115, 1337
BtgI CCRYGG 3 cut(s) 197, 1274, 1332
BtsCI GGATG 5 cut(s) 483, 965, 979, 1142, 1322
BtsI GCAGTG 3 cut(s) 104, 657, 717
BtsIMutI CAGTG 6 cut(s) 104, 282, 657, 717, 1539, 1557
Cac8I GCNNGC 2 cut(s) 992, 1217
CciI TCATGA 3 cut(s) 204, 463, 1293
CfoI GCGC 1 cut(s) 707
Cfr10I RCCGGY 2 cut(s) 134, 1387
Cfr13I GGNCC 2 cut(s) 50, 454
CseI GACGC 1 cut(s) 72
Csp6I GTAC 7 cut(s) 98, 192, 568, 688, 1120, 1340, 1444
CspAI ACCGGT 1 cut(s) 134
CspCI CAANNNNNGTGG 2 cut(s) 311, 346
CviQI GTAC 7 cut(s) 98, 192, 568, 688, 1120, 1340, 1444
DdeI CTNAG 5 cut(s) 87, 1283, 1327, 1451, 1569
DpnI GATC 5 cut(s) 75, 113, 849, 1208, 1427
DpnII GATC 5 cut(s) 73, 111, 847, 1206, 1425
EaeI YGGCCR 1 cut(s) 1335
Eco130I CCWWGG 1 cut(s) 1274
Eco24I GRGCYC 1 cut(s) 224
Eco32I GATATC 1 cut(s) 1380
Eco47I GGWCC 1 cut(s) 454
Eco57I CTGAAG 1 cut(s) 907
Eco72I CACGTG 1 cut(s) 585
Eco88I CYCGRG 1 cut(s) 93
Eco91I GGTNACC 1 cut(s) 143
EcoO65I GGTNACC 1 cut(s) 143
EcoRI GAATTC 2 cut(s) 345, 1488
EcoRV GATATC 1 cut(s) 1380
EcoT14I CCWWGG 1 cut(s) 1274
EcoT38I GRGCYC 1 cut(s) 224
ErhI CCWWGG 1 cut(s) 1274
FalI AAGNNNNNCTT 2 cut(s) 614, 646
FaqI GGGAC 1 cut(s) 1492
FauNDI CATATG 4 cut(s) 425, 800, 1075, 1131
FblI GTMKAC 1 cut(s) 826
Fnu4HI GCNGC 8 cut(s) 53, 315, 580, 708, 725, 1113, 1269, 1515
FokI GGATG 5 cut(s) 470, 952, 966, 1129, 1329
FriOI GRGCYC 1 cut(s) 224
Fsp4HI GCNGC 8 cut(s) 53, 315, 580, 708, 725, 1113, 1269, 1515
FspBI CTAG 4 cut(s) 291, 1163, 1251, 1370
GlaI GCGC 1 cut(s) 706
GluI GCNGC 8 cut(s) 53, 315, 580, 708, 725, 1113, 1269, 1515
GsaI CCCAGC 1 cut(s) 35
GsuI CTGGAG 1 cut(s) 63
HaeIII GGCC 8 cut(s) 52, 371, 551, 667, 930, 956, 1115, 1337
HapII CCGG 4 cut(s) 47, 135, 750, 1388
HgaI GACGC 1 cut(s) 72
HhaI GCGC 1 cut(s) 707
Hin6I GCGC 1 cut(s) 705
HinP1I GCGC 1 cut(s) 705
HinfI GANTC 5 cut(s) 287, 467, 715, 949, 1238
HpaII CCGG 4 cut(s) 47, 135, 750, 1388
HphI GGTGA 4 cut(s) 29, 155, 539, 1402
Hpy166II GTNNAC 3 cut(s) 390, 699, 827
Hpy188I TCNGA 6 cut(s) 7, 597, 608, 926, 1083, 1160
Hpy188III TCNNGA 9 cut(s) 205, 263, 464, 473, 559, 1146, 1204, 1294, 1429
Hpy8I GTNNAC 3 cut(s) 390, 699, 827
HpyAV CCTTC 4 cut(s) 328, 931, 1210, 1258
HpyCH4III ACNGT 5 cut(s) 201, 299, 1448, 1483, 1552
HpyCH4IV ACGT 1 cut(s) 584
HpyCH4V TGCA 8 cut(s) 495, 513, 518, 657, 662, 792, 899, 1055
HpyF10VI GCNNNNNNNGC 5 cut(s) 58, 311, 585, 776, 1307
HpyF3I CTNAG 5 cut(s) 87, 1283, 1327, 1451, 1569
HpySE526I ACGT 1 cut(s) 584
HspAI GCGC 1 cut(s) 705
Kzo9I GATC 5 cut(s) 73, 111, 847, 1206, 1425
LmnI GCTCC 5 cut(s) 219, 611, 647, 1202, 1276
Lsp1109I GCAGC 4 cut(s) 301, 736, 1280, 1501
LweI GCATC 3 cut(s) 256, 492, 1307
MaeI CTAG 4 cut(s) 291, 1163, 1251, 1370
MaeII ACGT 1 cut(s) 584
MaeIII GTNAC 5 cut(s) 143, 299, 1136, 1239, 1390
MalI GATC 5 cut(s) 75, 113, 849, 1208, 1427
MboI GATC 5 cut(s) 73, 111, 847, 1206, 1425
MboII GAAGA 2 cut(s) 83, 622
MfeI CAATTG 1 cut(s) 1056
MflI RGATCY 2 cut(s) 73, 1206
MhlI GDGCHC 2 cut(s) 224, 1199
MluCI AATT 7 cut(s) 345, 636, 1014, 1056, 1465, 1488, 1533
MluI ACGCGT 1 cut(s) 988
MlyI GAGTC 1 cut(s) 1247
MmeI TCCRAC 2 cut(s) 481, 885
MseI TTAA 3 cut(s) 176, 1260, 1496
MslI CAYNNNNRTG 6 cut(s) 424, 587, 1034, 1134, 1220, 1405
MspI CCGG 4 cut(s) 47, 135, 750, 1388
MspR9I CCNGG 1 cut(s) 48
MunI CAATTG 1 cut(s) 1056
Mva1269I GAATGC 1 cut(s) 419
MvnI CGCG 1 cut(s) 990
MwoI GCNNNNNNNGC 5 cut(s) 58, 311, 585, 776, 1307
NciI CCSGG 1 cut(s) 48
NcoI CCATGG 1 cut(s) 1274
NdeI CATATG 4 cut(s) 425, 800, 1075, 1131
NdeII GATC 5 cut(s) 73, 111, 847, 1206, 1425
NlaIV GGNNCC 3 cut(s) 51, 221, 769
NmuCI GTSAC 4 cut(s) 143, 1136, 1239, 1390
NspI RCATGY 4 cut(s) 657, 705, 1108, 1219
OliI CACNNNNGTG 1 cut(s) 587
PaeI GCATGC 1 cut(s) 1219
PagI TCATGA 3 cut(s) 204, 463, 1293
PcsI WCGNNNNNNNCGW 1 cut(s) 581
PctI GAATGC 1 cut(s) 419
PfeI GAWTC 4 cut(s) 287, 467, 715, 949
PinAI ACCGGT 1 cut(s) 134
PkrI GCNGC 8 cut(s) 54, 316, 581, 709, 726, 1114, 1270, 1516
PleI GAGTC 1 cut(s) 1246
PmaCI CACGTG 1 cut(s) 585
PmlI CACGTG 1 cut(s) 585
PpsI GAGTC 1 cut(s) 1246
Ppu21I YACGTR 1 cut(s) 585
PsiI TTATAA 1 cut(s) 1532
PspCI CACGTG 1 cut(s) 585
PspEI GGTNACC 1 cut(s) 143
PspFI CCCAGC 1 cut(s) 31
PspN4I GGNNCC 3 cut(s) 51, 221, 769
PspPI GGNCC 2 cut(s) 50, 454
PsuI RGATCY 2 cut(s) 73, 1206
RsaI GTAC 7 cut(s) 99, 193, 569, 689, 1121, 1341, 1445
RsaNI GTAC 7 cut(s) 98, 192, 568, 688, 1120, 1340, 1444
RseI CAYNNNNRTG 6 cut(s) 424, 587, 1034, 1134, 1220, 1405
SaqAI TTAA 3 cut(s) 176, 1260, 1496
SatI GCNGC 8 cut(s) 53, 315, 580, 708, 725, 1113, 1269, 1515
Sau3AI GATC 5 cut(s) 73, 111, 847, 1206, 1425
Sau96I GGNCC 2 cut(s) 50, 454
SchI GAGTC 1 cut(s) 1247
ScrFI CCNGG 1 cut(s) 48
SduI GDGCHC 2 cut(s) 224, 1199
SfaNI GCATC 3 cut(s) 256, 492, 1307
SfcI CTRYAG 1 cut(s) 66
SgrAI CRCCGGYG 1 cut(s) 134
SinI GGWCC 1 cut(s) 454
SmiMI CAYNNNNRTG 6 cut(s) 424, 587, 1034, 1134, 1220, 1405
SmlI CTYRAG 2 cut(s) 261, 944
SmoI CTYRAG 2 cut(s) 261, 944
SphI GCATGC 1 cut(s) 1219
Sse9I AATT 7 cut(s) 345, 636, 1014, 1056, 1465, 1488, 1533
SsiI CCGC 4 cut(s) 53, 579, 708, 1112
SspMI CTAG 4 cut(s) 291, 1163, 1251, 1370
StyD4I CCNGG 1 cut(s) 46
StyI CCWWGG 1 cut(s) 1274
TaaI ACNGT 5 cut(s) 201, 299, 1448, 1483, 1552
TaiI ACGT 1 cut(s) 587
TaqI TCGA 1 cut(s) 539
TasI AATT 7 cut(s) 345, 636, 1014, 1056, 1465, 1488, 1533
TatI WGTACW 1 cut(s) 1443
TauI GCSGC 4 cut(s) 55, 582, 710, 1115
TfiI GAWTC 4 cut(s) 287, 467, 715, 949
Tru1I TTAA 3 cut(s) 176, 1260, 1496
Tru9I TTAA 3 cut(s) 176, 1260, 1496
TscAI CASTG 6 cut(s) 111, 289, 664, 717, 1546, 1557
TseFI GTSAC 4 cut(s) 143, 1136, 1239, 1390
TseI GCWGC 4 cut(s) 314, 724, 1268, 1514
Tsp45I GTSAC 4 cut(s) 143, 1136, 1239, 1390
TspDTI ATGAA 7 cut(s) 193, 412, 452, 480, 987, 1008, 1402
TspGWI ACGGA 1 cut(s) 476
TspRI CASTG 6 cut(s) 111, 289, 664, 717, 1546, 1557
VpaK11BI GGWCC 1 cut(s) 454
XapI RAATTY 3 cut(s) 345, 1014, 1488
XceI RCATGY 4 cut(s) 657, 705, 1108, 1219
XcmI CCANNNNNNNNNTGG 2 cut(s) 641, 1413
XmiI GTMKAC 1 cut(s) 826
XspI CTAG 4 cut(s) 291, 1163, 1251, 1370
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.