MD11G1070000.v1.1

Belongs to the glycosyltransferase 8 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Reverse (-)
5983858 .. 5985447
1590 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1070000.v1.1.491

Sequence Viewer

Length: 1080 bp
ATGTCGAGCGCCAATCCCCACAGAGACCTCGTGGAGTTCCCACTCGCTGGCGACGACGATGACATCCGATCTCAGACCTATCGTCGTCGGCTTGCCATCATGCACATAGATCTGAAAGCTCAAGGTGCGTTCTCGGCAGCCAATGAACCCAGGAGGGCCTATGTGACCATGTTGGCTGGAGACTATGACGAGGCTTTGTTCGGTGTGGTTGGGTTGGCCAAGGGCTTGAAAAAAAGGATGAGCAAGTACCCCCTGGTTGTGGTTGTCTTGCCGGATGTGTCTGAAGAGTATCGCAAGCTTCTGGCCTCCCATGGCTGCACAGTGAAAGAGATTGAGCCGGTGTTCAGGGCCTCATATGTCACAAATTACTTTAAGCTTCGCATTTGGGCGCTTGAGGAGTATGACAAAATGATCTTCTTGGACGGAAACGTCCTAGTCTTTGAGAACATTGACCACATGTTCGACTACCCTGACTCCTACTTCTATGCGGCACTGGACTGCTTCTGTGAGAACTCTTGGAGCCACAGTCCACATCACAAGATTGGGCACTGCCAGCAGTGGCCCAACAAGGTCCAGTGGGACCCCACATTGGGCCCCAAACCTCCTCTTTACTTCAATGCTAGCGTGTTTGTGTTTGAGCCCAGCTTGGTGACCTACAGTGACCTCATCAAAACCCTCCAGACTTCTCGTACCACCGCTTTTGCAGAGCAGGATCTTCTGAACGTGTTTTTCAAGGACAAGTTGGTGGCCTTGGCTCCACATTACAACCTTATGCTGCCCATGCTCTGGCGTCACCCAGTGGCCGTTGAGCTTGACAGGGTCAAAGTTGTTAACTATTGTGCTAATGGGTCTAAGCCATGGAGTTACACTGGGAAGGAAGAGAACATGGAGAGGGAAGATGTTAAGATGCTGGTGAACAAATGGTGGGAGATATACAGTGATGACTCTTTGGACTGCAAGAAGACTGTGACTTCAGCTGAGGCCGAAAAGAGCACAGACCAAGTTAACGTGGAGCCACCCGAAGCGGCATTTTCCGAGACTGGCGCTGTCGAATTCATCTCCGCCCCATCTGCTGCTTGA

Protein Analysis

360

Amino Acids

40.98

Weight (kDa)

5.36

Isoelectric Point (pI)

45.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_8 PF01501 62 - 290 1.3e-24 Glycosyl transferase family 8
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024489)

Species Orthologous Gene IDs
malus_domestica MD11G1070000.v1.1
pyrus_communis pycom11g05820 pycom11g05850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 428
AccB7I CCANNNNNTGG 2 cut(s) 47, 786
AciI CCGC 4 cut(s) 488, 696, 1025, 1062
AclWI GGATC 1 cut(s) 720
AcoI YGGCCR 2 cut(s) 216, 801
AcsI RAATTY 1 cut(s) 1052
AcuI CTGAAG 2 cut(s) 303, 957
AcyI GRCGYC 1 cut(s) 790
AdeI CACNNNGTG 1 cut(s) 799
AfaI GTAC 2 cut(s) 248, 691
AfiI CCNNNNNNNGG 5 cut(s) 47, 259, 589, 590, 786
AflIII ACRYGT 2 cut(s) 456, 723
AgsI TTSAA 3 cut(s) 229, 616, 733
AhdI GACNNNNNGTC 1 cut(s) 81
AjnI CCWGG 2 cut(s) 149, 252
AluBI AGCT 6 cut(s) 119, 298, 376, 645, 811, 977
AluI AGCT 6 cut(s) 119, 298, 376, 645, 811, 977
Alw21I GWGCWC 1 cut(s) 995
Alw26I GTCTC 3 cut(s) 18, 174, 1031
AlwI GGATC 1 cut(s) 720
AoxI GGCC 9 cut(s) 156, 216, 303, 348, 560, 592, 747, 801, 981
ApaI GGGCCC 1 cut(s) 596
ApeKI GCWGC 4 cut(s) 137, 315, 775, 1073
ApoI RAATTY 1 cut(s) 1052
ArsI GACNNNNNNTTYG 2 cut(s) 443, 475
AspLEI GCGC 3 cut(s) 11, 391, 1046
AspS9I GGNCC 7 cut(s) 156, 348, 561, 571, 580, 592, 593
AsuHPI GGTGA 3 cut(s) 661, 785, 925
AsuNHI GCTAGC 1 cut(s) 620
AvaII GGWCC 2 cut(s) 571, 580
BaeGI GKGCMC 2 cut(s) 549, 596
BalI TGGCCA 1 cut(s) 218
BanII GRGCYC 2 cut(s) 596, 642
BauI CACGAG 1 cut(s) 29
BbsI GAAGAC 1 cut(s) 968
Bbv12I GWGCWC 1 cut(s) 995
BbvCI CCTCAGC 1 cut(s) 978
BbvI GCAGC 4 cut(s) 149, 302, 762, 1060
BccI CCATC 2 cut(s) 104, 1075
BceAI ACGGC 1 cut(s) 788
BciT130I CCWGG 2 cut(s) 151, 254
BcoDI GTCTC 3 cut(s) 18, 174, 1031
BfaI CTAG 2 cut(s) 434, 621
BfmI CTRYAG 1 cut(s) 655
BfoI RGCGCY 3 cut(s) 12, 392, 1047
BglII AGATCT 1 cut(s) 109
BisI GCNGC 6 cut(s) 138, 316, 489, 776, 1026, 1074
BlsI GCNGC 6 cut(s) 139, 317, 490, 777, 1027, 1075
Bme1390I CCNGG 2 cut(s) 151, 254
Bme18I GGWCC 2 cut(s) 571, 580
BmeRI GACNNNNNGTC 1 cut(s) 81
BmgT120I GGNCC 7 cut(s) 156, 348, 561, 571, 580, 592, 593
BmiI GGNNCC 7 cut(s) 521, 581, 582, 594, 595, 756, 1014
BmrFI CCNGG 2 cut(s) 151, 254
BmrI ACTGGG 2 cut(s) 791, 879
BmsI GCATC 1 cut(s) 897
BmtI GCTAGC 1 cut(s) 624
BmuI ACTGGG 2 cut(s) 791, 879
BpiI GAAGAC 1 cut(s) 968
BpmI CTGGAG 2 cut(s) 198, 662
Bpu10I CCTNAGC 1 cut(s) 978
BpuEI CTTGAG 2 cut(s) 105, 413
BsaHI GRCGYC 1 cut(s) 790
BsaI GGTCTC 1 cut(s) 18
BsaJI CCNNGG 6 cut(s) 149, 219, 252, 310, 750, 857
BsaXI ACNNNNNCTCC 4 cut(s) 458, 488, 511, 541
Bsc4I CCNNNNNNNGG 5 cut(s) 47, 259, 589, 590, 786
Bse118I RCCGGY 1 cut(s) 337
Bse1I ACTGG 5 cut(s) 498, 574, 797, 874, 1045
BseBI CCWGG 2 cut(s) 151, 254
BseDI CCNNGG 6 cut(s) 149, 219, 252, 310, 750, 857
BseGI GGATG 3 cut(s) 63, 243, 280
BseLI CCNNNNNNNGG 5 cut(s) 47, 259, 589, 590, 786
BseMII CTCAG 2 cut(s) 86, 969
BseNI ACTGG 5 cut(s) 498, 574, 797, 874, 1045
BseRI GAGGAG 2 cut(s) 410, 594
BseSI GKGCMC 2 cut(s) 549, 596
BseXI GCAGC 4 cut(s) 149, 302, 762, 1060
BseYI CCCAGC 1 cut(s) 641
BsgI GTGCAG 1 cut(s) 301
BshFI GGCC 9 cut(s) 158, 218, 305, 350, 562, 594, 749, 803, 983
BsiHKAI GWGCWC 1 cut(s) 995
BsiSI CCGG 2 cut(s) 272, 338
BslFI GGGAC 1 cut(s) 593
BslI CCNNNNNNNGG 5 cut(s) 47, 259, 589, 590, 786
BsmAI GTCTC 3 cut(s) 18, 174, 1031
BsmFI GGGAC 1 cut(s) 593
BsnI GGCC 9 cut(s) 158, 218, 305, 350, 562, 594, 749, 803, 983
Bso31I GGTCTC 1 cut(s) 18
Bsp120I GGGCCC 1 cut(s) 592
Bsp1286I GDGCHC 4 cut(s) 549, 596, 642, 995
Bsp143I GATC 4 cut(s) 68, 109, 411, 712
Bsp19I CCATGG 2 cut(s) 310, 857
BspACI CCGC 4 cut(s) 488, 696, 1025, 1062
BspANI GGCC 9 cut(s) 158, 218, 305, 350, 562, 594, 749, 803, 983
BspCNI CTCAG 2 cut(s) 85, 970
BspLI GGNNCC 7 cut(s) 521, 581, 582, 594, 595, 756, 1014
BspOI GCTAGC 1 cut(s) 624
BspPI GGATC 1 cut(s) 720
BspTNI GGTCTC 1 cut(s) 18
BsrFI RCCGGY 1 cut(s) 337
BsrI ACTGG 5 cut(s) 498, 574, 797, 874, 1045
BssAI RCCGGY 1 cut(s) 337
BssECI CCNNGG 6 cut(s) 149, 219, 252, 310, 750, 857
BssMI GATC 4 cut(s) 68, 109, 411, 712
BssNI GRCGYC 1 cut(s) 790
BssSI CACGAG 1 cut(s) 29
BssT1I CCWWGG 4 cut(s) 219, 310, 750, 857
Bst2BI CACGAG 1 cut(s) 29
Bst2UI CCWGG 2 cut(s) 151, 254
Bst4CI ACNGT 5 cut(s) 322, 527, 659, 938, 967
Bst6I CTCTTC 2 cut(s) 279, 873
BstACI GRCGYC 1 cut(s) 790
BstC8I GCNNGC 5 cut(s) 49, 93, 296, 554, 622
BstDEI CTNAG 3 cut(s) 72, 852, 978
BstDSI CCRYGG 2 cut(s) 310, 857
BstEII GGTNACC 1 cut(s) 649
BstF5I GGATG 3 cut(s) 63, 243, 280
BstH2I RGCGCY 3 cut(s) 12, 392, 1047
BstHHI GCGC 3 cut(s) 11, 391, 1046
BstKTI GATC 4 cut(s) 71, 112, 414, 715
BstMAI GTCTC 3 cut(s) 18, 174, 1031
BstMBI GATC 4 cut(s) 68, 109, 411, 712
BstMWI GCNNNNNNNGC 5 cut(s) 125, 134, 553, 781, 1070
BstNI CCWGG 2 cut(s) 151, 254
BstNSI RCATGY 1 cut(s) 460
BstPI GGTNACC 1 cut(s) 649
BstSCI CCNGG 2 cut(s) 149, 252
BstSFI CTRYAG 1 cut(s) 655
BstSLI GKGCMC 2 cut(s) 549, 596
BstV1I GCAGC 4 cut(s) 149, 302, 762, 1060
BstV2I GAAGAC 1 cut(s) 968
BstX2I RGATCY 2 cut(s) 109, 712
BstYI RGATCY 2 cut(s) 109, 712
BsuRI GGCC 9 cut(s) 158, 218, 305, 350, 562, 594, 749, 803, 983
BtgI CCRYGG 2 cut(s) 310, 857
BtsCI GGATG 3 cut(s) 63, 243, 280
BtsI GCAGTG 2 cut(s) 547, 563
BtsIMutI CAGTG 9 cut(s) 327, 491, 547, 563, 581, 664, 804, 867, 943
Cac8I GCNNGC 5 cut(s) 49, 93, 296, 554, 622
CfoI GCGC 3 cut(s) 11, 391, 1046
Cfr10I RCCGGY 1 cut(s) 337
Cfr13I GGNCC 7 cut(s) 156, 348, 561, 571, 580, 592, 593
CseI GACGC 1 cut(s) 779
Csp6I GTAC 2 cut(s) 247, 690
CspCI CAANNNNNGTGG 2 cut(s) 682, 717
CviAII CATG 7 cut(s) 100, 169, 311, 457, 781, 858, 886
CviQI GTAC 2 cut(s) 247, 690
DdeI CTNAG 3 cut(s) 72, 852, 978
DpnI GATC 4 cut(s) 70, 111, 413, 714
DpnII GATC 4 cut(s) 68, 109, 411, 712
DraIII CACNNNGTG 1 cut(s) 799
DrdI GACNNNNNNGTC 1 cut(s) 428
DriI GACNNNNNGTC 1 cut(s) 81
DseDI GACNNNNNNGTC 1 cut(s) 428
EaeI YGGCCR 2 cut(s) 216, 801
Eam1104I CTCTTC 2 cut(s) 279, 873
Eam1105I GACNNNNNGTC 1 cut(s) 81
EarI CTCTTC 2 cut(s) 279, 873
EciI GGCGGA 1 cut(s) 1051
Eco130I CCWWGG 4 cut(s) 219, 310, 750, 857
Eco24I GRGCYC 2 cut(s) 596, 642
Eco31I GGTCTC 1 cut(s) 18
Eco47I GGWCC 2 cut(s) 571, 580
Eco57I CTGAAG 2 cut(s) 303, 957
Eco91I GGTNACC 1 cut(s) 649
EcoO109I RGGNCCY 4 cut(s) 156, 348, 580, 593
EcoO65I GGTNACC 1 cut(s) 649
EcoRI GAATTC 1 cut(s) 1052
EcoRII CCWGG 2 cut(s) 149, 252
EcoT14I CCWWGG 4 cut(s) 219, 310, 750, 857
EcoT38I GRGCYC 2 cut(s) 596, 642
ErhI CCWWGG 4 cut(s) 219, 310, 750, 857
FaeI CATG 7 cut(s) 103, 172, 314, 460, 784, 861, 889
FaqI GGGAC 1 cut(s) 593
FatI CATG 7 cut(s) 99, 168, 310, 456, 780, 857, 885
FauNDI CATATG 1 cut(s) 355
Fnu4HI GCNGC 6 cut(s) 138, 316, 489, 776, 1026, 1074
FokI GGATG 3 cut(s) 50, 250, 287
FriOI GRGCYC 2 cut(s) 596, 642
Fsp4HI GCNGC 6 cut(s) 138, 316, 489, 776, 1026, 1074
FspBI CTAG 2 cut(s) 434, 621
GlaI GCGC 3 cut(s) 10, 390, 1045
GluI GCNGC 6 cut(s) 138, 316, 489, 776, 1026, 1074
GsaI CCCAGC 1 cut(s) 645
GsuI CTGGAG 2 cut(s) 198, 662
HaeII RGCGCY 3 cut(s) 12, 392, 1047
HaeIII GGCC 9 cut(s) 158, 218, 305, 350, 562, 594, 749, 803, 983
HapII CCGG 2 cut(s) 272, 338
HgaI GACGC 1 cut(s) 779
HhaI GCGC 3 cut(s) 11, 391, 1046
Hin1I GRCGYC 1 cut(s) 790
Hin1II CATG 7 cut(s) 103, 172, 314, 460, 784, 861, 889
Hin6I GCGC 3 cut(s) 9, 389, 1044
HinP1I GCGC 3 cut(s) 9, 389, 1044
HincII GTYRAC 2 cut(s) 832, 1006
HindII GTYRAC 2 cut(s) 832, 1006
HindIII AAGCTT 2 cut(s) 296, 374
HinfI GANTC 2 cut(s) 473, 944
HpaI GTTAAC 2 cut(s) 832, 1006
HpaII CCGG 2 cut(s) 272, 338
HphI GGTGA 3 cut(s) 661, 785, 925
Hpy166II GTNNAC 4 cut(s) 530, 832, 916, 1006
Hpy188I TCNGA 6 cut(s) 68, 75, 114, 283, 720, 1036
Hpy188III TCNNGA 1 cut(s) 679
Hpy8I GTNNAC 4 cut(s) 530, 832, 916, 1006
Hpy99I CGWCG 4 cut(s) 56, 59, 87, 90
HpyAV CCTTC 1 cut(s) 868
HpyCH4III ACNGT 5 cut(s) 322, 527, 659, 938, 967
HpyCH4IV ACGT 3 cut(s) 429, 723, 1008
HpyCH4V TGCA 4 cut(s) 103, 318, 704, 957
HpyF10VI GCNNNNNNNGC 5 cut(s) 125, 134, 553, 781, 1070
HpyF3I CTNAG 3 cut(s) 72, 852, 978
HpySE526I ACGT 3 cut(s) 429, 723, 1008
Hsp92I GRCGYC 1 cut(s) 790
Hsp92II CATG 7 cut(s) 103, 172, 314, 460, 784, 861, 889
HspAI GCGC 3 cut(s) 9, 389, 1044
KflI GGGWCCC 1 cut(s) 580
KspAI GTTAAC 2 cut(s) 832, 1006
Kzo9I GATC 4 cut(s) 68, 109, 411, 712
LmnI GCTCC 3 cut(s) 519, 760, 1012
Lsp1109I GCAGC 4 cut(s) 149, 302, 762, 1060
LweI GCATC 1 cut(s) 897
MaeI CTAG 2 cut(s) 434, 621
MaeII ACGT 3 cut(s) 429, 723, 1008
MaeIII GTNAC 7 cut(s) 163, 358, 649, 659, 791, 863, 967
MalI GATC 4 cut(s) 70, 111, 413, 714
MboI GATC 4 cut(s) 68, 109, 411, 712
MboII GAAGA 6 cut(s) 296, 406, 707, 890, 908, 973
MflI RGATCY 2 cut(s) 109, 712
MhlI GDGCHC 4 cut(s) 549, 596, 642, 995
MlsI TGGCCA 1 cut(s) 218
MluCI AATT 2 cut(s) 364, 1052
MluNI TGGCCA 1 cut(s) 218
MlyI GAGTC 2 cut(s) 467, 938
Mox20I TGGCCA 1 cut(s) 218
MscI TGGCCA 1 cut(s) 218
MseI TTAA 4 cut(s) 372, 831, 903, 1005
Msp20I TGGCCA 1 cut(s) 218
MspA1I CMGCKG 1 cut(s) 977
MspI CCGG 2 cut(s) 272, 338
MspR9I CCNGG 2 cut(s) 151, 254
MvaI CCWGG 2 cut(s) 151, 254
MwoI GCNNNNNNNGC 5 cut(s) 125, 134, 553, 781, 1070
NcoI CCATGG 2 cut(s) 310, 857
NdeI CATATG 1 cut(s) 355
NdeII GATC 4 cut(s) 68, 109, 411, 712
NheI GCTAGC 1 cut(s) 620
NlaIII CATG 7 cut(s) 103, 172, 314, 460, 784, 861, 889
NlaIV GGNNCC 7 cut(s) 521, 581, 582, 594, 595, 756, 1014
NmeAIII GCCGAG 1 cut(s) 113
NmuCI GTSAC 6 cut(s) 163, 358, 649, 659, 791, 967
NspI RCATGY 1 cut(s) 460
PciI ACATGT 1 cut(s) 456
PcsI WCGNNNNNNNCGW 1 cut(s) 51
PflFI GACNNNGTC 1 cut(s) 818
PflMI CCANNNNNTGG 2 cut(s) 47, 786
PkrI GCNGC 6 cut(s) 139, 317, 490, 777, 1027, 1075
PleI GAGTC 2 cut(s) 467, 938
PpsI GAGTC 2 cut(s) 467, 938
PpuMI RGGWCCY 1 cut(s) 580
PscI ACATGT 1 cut(s) 456
Psp5II RGGWCCY 1 cut(s) 580
Psp6I CCWGG 2 cut(s) 149, 252
PspEI GGTNACC 1 cut(s) 649
PspFI CCCAGC 1 cut(s) 641
PspGI CCWGG 2 cut(s) 149, 252
PspN4I GGNNCC 7 cut(s) 521, 581, 582, 594, 595, 756, 1014
PspOMI GGGCCC 1 cut(s) 592
PspPI GGNCC 7 cut(s) 156, 348, 561, 571, 580, 592, 593
PspPPI RGGWCCY 1 cut(s) 580
PsuI RGATCY 2 cut(s) 109, 712
PsyI GACNNNGTC 1 cut(s) 818
PvuII CAGCTG 1 cut(s) 977
RsaI GTAC 2 cut(s) 248, 691
RsaNI GTAC 2 cut(s) 247, 690
SaqAI TTAA 4 cut(s) 372, 831, 903, 1005
SatI GCNGC 6 cut(s) 138, 316, 489, 776, 1026, 1074
Sau3AI GATC 4 cut(s) 68, 109, 411, 712
Sau96I GGNCC 7 cut(s) 156, 348, 561, 571, 580, 592, 593
SchI GAGTC 2 cut(s) 467, 938
ScrFI CCNGG 2 cut(s) 151, 254
SduI GDGCHC 4 cut(s) 549, 596, 642, 995
SfaNI GCATC 1 cut(s) 897
SfcI CTRYAG 1 cut(s) 655
SinI GGWCC 2 cut(s) 571, 580
SmlI CTYRAG 2 cut(s) 120, 392
SmoI CTYRAG 2 cut(s) 120, 392
Sse9I AATT 2 cut(s) 364, 1052
SsiI CCGC 4 cut(s) 488, 696, 1025, 1062
SspMI CTAG 2 cut(s) 434, 621
StyD4I CCNGG 2 cut(s) 149, 252
StyI CCWWGG 4 cut(s) 219, 310, 750, 857
TaaI ACNGT 5 cut(s) 322, 527, 659, 938, 967
TaiI ACGT 3 cut(s) 432, 726, 1011
TaqI TCGA 3 cut(s) 5, 462, 1050
TasI AATT 2 cut(s) 364, 1052
TauI GCSGC 2 cut(s) 491, 1028
Tru1I TTAA 4 cut(s) 372, 831, 903, 1005
Tru9I TTAA 4 cut(s) 372, 831, 903, 1005
TscAI CASTG 9 cut(s) 327, 498, 554, 563, 581, 664, 804, 874, 943
TseFI GTSAC 6 cut(s) 163, 358, 649, 659, 791, 967
TseI GCWGC 4 cut(s) 137, 315, 775, 1073
Tsp45I GTSAC 6 cut(s) 163, 358, 649, 659, 791, 967
TspDTI ATGAA 2 cut(s) 159, 1045
TspGWI ACGGA 1 cut(s) 438
TspRI CASTG 9 cut(s) 327, 498, 554, 563, 581, 664, 804, 874, 943
Tth111I GACNNNGTC 1 cut(s) 818
Van91I CCANNNNNTGG 2 cut(s) 47, 786
VpaK11BI GGWCC 2 cut(s) 571, 580
XapI RAATTY 1 cut(s) 1052
XceI RCATGY 1 cut(s) 460
XspI CTAG 2 cut(s) 434, 621
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.