MD11G1104100.v1.1

Histone-lysine n-methyltransferase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Reverse (-)
8832936 .. 8835972
3037 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1104100.v1.1.491

Sequence Viewer

Length: 183 bp
ATGAAGAGTTTGCAATTGGGGTGTGTATACACGTGTTCTGTATGCTGTCTTGAAACATGTGATCATGTTTACCTTTTTGATAAGGACTATGATGATGCAAAAGATATCTACGGGAAATCCATGCGTTGCAAATTCCCATATGATCAGAGAGGTCAACTTATCTTGGAGTCAATGCTTGGATAA

Protein Analysis

61

Amino Acids

6.94

Weight (kDa)

5.03

Isoelectric Point (pI)

29.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028906)

Species Orthologous Gene IDs
malus_domestica MD11G1104100.v1.1
pyrus_communis pycom07g00070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 27
AcsI RAATTY 1 cut(s) 131
AcvI CACGTG 1 cut(s) 33
AflIII ACRYGT 3 cut(s) 30, 32, 56
AgsI TTSAA 1 cut(s) 53
ApoI RAATTY 1 cut(s) 131
BbrPI CACGTG 1 cut(s) 33
BclI TGATCA 2 cut(s) 61, 142
BmsI GCATC 1 cut(s) 85
BsaAI YACGTR 1 cut(s) 33
Bsp143I GATC 2 cut(s) 61, 142
BssMI GATC 2 cut(s) 61, 142
BssNAI GTATAC 1 cut(s) 28
Bst1107I GTATAC 1 cut(s) 28
BstBAI YACGTR 1 cut(s) 33
BstKTI GATC 2 cut(s) 64, 145
BstMBI GATC 2 cut(s) 61, 142
BstNSI RCATGY 1 cut(s) 60
BstZ17I GTATAC 1 cut(s) 28
CviAII CATG 3 cut(s) 57, 65, 121
DpnI GATC 2 cut(s) 63, 144
DpnII GATC 2 cut(s) 61, 142
Eco32I GATATC 1 cut(s) 106
Eco72I CACGTG 1 cut(s) 33
EcoRV GATATC 1 cut(s) 106
FaeI CATG 3 cut(s) 60, 68, 124
FaiI YATR 8 cut(s) 28, 43, 58, 66, 90, 122, 139, 141
FatI CATG 3 cut(s) 56, 64, 120
FauNDI CATATG 1 cut(s) 139
FbaI TGATCA 2 cut(s) 61, 142
FblI GTMKAC 1 cut(s) 27
Hin1II CATG 3 cut(s) 60, 68, 124
HincII GTYRAC 1 cut(s) 155
HindII GTYRAC 1 cut(s) 155
HinfI GANTC 1 cut(s) 167
Hpy166II GTNNAC 3 cut(s) 28, 70, 155
Hpy188I TCNGA 1 cut(s) 147
Hpy188III TCNNGA 1 cut(s) 50
Hpy8I GTNNAC 3 cut(s) 28, 70, 155
HpyCH4IV ACGT 1 cut(s) 32
HpyCH4V TGCA 3 cut(s) 13, 98, 129
HpySE526I ACGT 1 cut(s) 32
Hsp92II CATG 3 cut(s) 60, 68, 124
Ksp22I TGATCA 2 cut(s) 61, 142
Kzo9I GATC 2 cut(s) 61, 142
LweI GCATC 1 cut(s) 85
MaeII ACGT 1 cut(s) 32
MalI GATC 2 cut(s) 63, 144
MboI GATC 2 cut(s) 61, 142
MboII GAAGA 1 cut(s) 16
MfeI CAATTG 1 cut(s) 14
MluCI AATT 2 cut(s) 14, 131
MlyI GAGTC 1 cut(s) 176
MnlI CCTC 1 cut(s) 143
MunI CAATTG 1 cut(s) 14
NdeI CATATG 1 cut(s) 139
NdeII GATC 2 cut(s) 61, 142
NlaIII CATG 3 cut(s) 60, 68, 124
NspI RCATGY 1 cut(s) 60
PciI ACATGT 1 cut(s) 56
PleI GAGTC 1 cut(s) 175
PmaCI CACGTG 1 cut(s) 33
PmlI CACGTG 1 cut(s) 33
PpsI GAGTC 1 cut(s) 175
Ppu21I YACGTR 1 cut(s) 33
PscI ACATGT 1 cut(s) 56
PspCI CACGTG 1 cut(s) 33
Sau3AI GATC 2 cut(s) 61, 142
SchI GAGTC 1 cut(s) 176
SetI ASST 3 cut(s) 35, 75, 154
SfaNI GCATC 1 cut(s) 85
SgeI CNNG 8 cut(s) 43, 45, 62, 69, 77, 124, 133, 175
Sse9I AATT 2 cut(s) 14, 131
TaiI ACGT 1 cut(s) 35
TasI AATT 2 cut(s) 14, 131
TspDTI ATGAA 1 cut(s) 17
XapI RAATTY 1 cut(s) 131
XceI RCATGY 1 cut(s) 60
XmiI GTMKAC 1 cut(s) 27
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.