MD11G1104800.v1.1

Pyruvate kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0028908
Physical Location & Seq
Forward (+)
8916383 .. 8924655
8273 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1104800.v1.1.491

Sequence Viewer

Length: 285 bp
ATGTCTGTGGCACGGTCTGATTTTTCATGGGGTGATGCCCAGTTTCACCAAGAGACATTGGGAAACCTGAAGGTTGCAATGAAGAGTACCAACAAACTTTGTGCATTTGAGTCTACTGAGTTCTGCGGATTCACTCAATTGCAATCATCTCTTCTGCAACACTTGCACCCTGAGTTGATGAAATCGGGTTCCATTTGTCCAGTTTATAAAATTCCATATTGGCGCAGAGGCAAAAGTTTTTATGCAACCTCATTACTTGCAGAATTTGGTTTGGTCAACCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004743 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0006082 GO:0006090 GO:0006091 GO:0006096 GO:0006139 GO:0006163 GO:0006164 GO:0006165 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006754 GO:0006757 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009108 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009132 GO:0009135 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009166 GO:0009167 GO:0009168 GO:0009179 GO:0009185 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009987 GO:0016052 GO:0016053 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0018130 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019439 GO:0019637 GO:0019693 GO:0019752 GO:0032787 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0042866 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044270 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046031 GO:0046034 GO:0046390 GO:0046394 GO:0046434 GO:0046483 GO:0046496 GO:0046700 GO:0046939 GO:0051186 GO:0051188 GO:0055086 GO:0071704 GO:0072330 GO:0072521 GO:0072522 GO:0072524 GO:0072525 GO:0090407 GO:1901135 GO:1901137 GO:1901292 GO:1901293 GO:1901360 GO:1901361 GO:1901362 GO:1901564 GO:1901566 GO:1901575 GO:1901576
KEGG Pathways
Metabolic & Signaling
ko00010 ko00230 ko00620 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 ko04922 ko04930 ko05165 ko05203 ko05230 map00010 map00230 map00620 map01100 map01110 map01120 map01130 map01200 map01230 map04922 map04930 map05165 map05203 map05230
Pfam Domains
Protein Families
PK PK_C

Protein Analysis

95

Amino Acids

10.63

Weight (kDa)

8.52

Isoelectric Point (pI)

45.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0028908)

Species Orthologous Gene IDs
malus_domestica MD11G1104800.v1.1
pyrus_communis pycom08g17220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 207
AccI GTMKAC 1 cut(s) 113
AciI CCGC 1 cut(s) 126
AcsI RAATTY 2 cut(s) 210, 263
AcuI CTGAAG 1 cut(s) 89
AfaI GTAC 1 cut(s) 88
Alw26I GTCTC 1 cut(s) 47
ApoI RAATTY 2 cut(s) 210, 263
AspLEI GCGC 1 cut(s) 225
AsuHPI GGTGA 2 cut(s) 38, 44
BcoDI GTCTC 1 cut(s) 47
BmiI GGNNCC 1 cut(s) 190
BmrI ACTGGG 1 cut(s) 34
BmsI GCATC 1 cut(s) 25
BmuI ACTGGG 1 cut(s) 34
Bse1I ACTGG 2 cut(s) 40, 200
Bse3DI GCAATG 1 cut(s) 84
BseMI GCAATG 1 cut(s) 84
BseMII CTCAG 2 cut(s) 108, 162
BseNI ACTGG 2 cut(s) 40, 200
BsmAI GTCTC 1 cut(s) 47
BspACI CCGC 1 cut(s) 126
BspCNI CTCAG 2 cut(s) 109, 163
BspLI GGNNCC 1 cut(s) 190
BsrDI GCAATG 1 cut(s) 84
BsrI ACTGG 2 cut(s) 40, 200
Bst4CI ACNGT 1 cut(s) 15
Bst6I CTCTTC 2 cut(s) 77, 156
BstAPI GCANNNNNTGC 1 cut(s) 163
BstDEI CTNAG 2 cut(s) 117, 171
BstHHI GCGC 1 cut(s) 225
BstMAI GTCTC 1 cut(s) 47
BstMWI GCNNNNNNNGC 1 cut(s) 163
CfoI GCGC 1 cut(s) 225
Csp6I GTAC 1 cut(s) 87
CviAII CATG 1 cut(s) 27
CviQI GTAC 1 cut(s) 87
DdeI CTNAG 2 cut(s) 117, 171
Eam1104I CTCTTC 2 cut(s) 77, 156
EarI CTCTTC 2 cut(s) 77, 156
Eco57I CTGAAG 1 cut(s) 89
FaeI CATG 1 cut(s) 30
FaiI YATR 4 cut(s) 28, 207, 217, 243
FatI CATG 1 cut(s) 26
FblI GTMKAC 1 cut(s) 113
GlaI GCGC 1 cut(s) 224
HhaI GCGC 1 cut(s) 225
Hin1II CATG 1 cut(s) 30
Hin6I GCGC 1 cut(s) 223
HinP1I GCGC 1 cut(s) 223
HincII GTYRAC 1 cut(s) 277
HindII GTYRAC 1 cut(s) 277
HinfI GANTC 2 cut(s) 110, 129
HphI GGTGA 2 cut(s) 38, 44
Hpy166II GTNNAC 2 cut(s) 114, 277
Hpy188I TCNGA 1 cut(s) 19
Hpy8I GTNNAC 2 cut(s) 114, 277
HpyAV CCTTC 1 cut(s) 64
HpyCH4III ACNGT 1 cut(s) 15
HpyCH4V TGCA 7 cut(s) 77, 104, 142, 157, 166, 245, 260
HpyF10VI GCNNNNNNNGC 1 cut(s) 163
HpyF3I CTNAG 2 cut(s) 117, 171
Hsp92II CATG 1 cut(s) 30
HspAI GCGC 1 cut(s) 223
LpnPI CCDG 4 cut(s) 53, 80, 183, 213
LweI GCATC 1 cut(s) 25
MboII GAAGA 2 cut(s) 94, 143
MfeI CAATTG 1 cut(s) 137
MluCI AATT 3 cut(s) 137, 210, 263
MlyI GAGTC 1 cut(s) 119
MnlI CCTC 2 cut(s) 221, 259
MseI TTAA 1 cut(s) 283
MunI CAATTG 1 cut(s) 137
MwoI GCNNNNNNNGC 1 cut(s) 163
NlaIII CATG 1 cut(s) 30
NlaIV GGNNCC 1 cut(s) 190
PfeI GAWTC 1 cut(s) 129
PleI GAGTC 1 cut(s) 118
PpsI GAGTC 1 cut(s) 118
PsiI TTATAA 1 cut(s) 207
PspN4I GGNNCC 1 cut(s) 190
RsaI GTAC 1 cut(s) 88
RsaNI GTAC 1 cut(s) 87
SaqAI TTAA 1 cut(s) 283
SchI GAGTC 1 cut(s) 119
SetI ASST 4 cut(s) 69, 75, 251, 282
SfaNI GCATC 1 cut(s) 25
Sse9I AATT 3 cut(s) 137, 210, 263
SsiI CCGC 1 cut(s) 126
TaaI ACNGT 1 cut(s) 15
TasI AATT 3 cut(s) 137, 210, 263
TfiI GAWTC 1 cut(s) 129
Tru1I TTAA 1 cut(s) 283
Tru9I TTAA 1 cut(s) 283
TspDTI ATGAA 3 cut(s) 15, 95, 194
XapI RAATTY 2 cut(s) 210, 263
XmiI GTMKAC 1 cut(s) 113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.