Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0022435

Physical Location & Seq

Genomic Coordinates Reverse (-)

31018424 .. 31026659

Gene Structure 8236 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1212400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1221 bp

ATGAAACTCTTCACTACCTCAGCGTCCCTCGATCGCGAGCTTCAGCCATCGCTGGAAATGAAAGATTCAGTTACGGCCATGGAGAAAATCGTAGGTCACAACTTCAAGAACAAGAGGCTCCTAGAGGAAGCTCTCACACACTCCTCCATCACTTACTTTCCCTCGTATAAGCGTCTCGCGGTGCTCGGCGACGCCGCCCTTGGCCTCGCTATGAGTAAGCACCTCTTTCGCGCTTACCCCAATATGGATCAAGGCAAATTCTCAGAGCTCCGCTCCGCCAATGTTAGTAAGCGGAAGTTCGCATGCGCCGCTGTAAAACATGGTTTTTATGACTACCTTCGCCACAATTCACCTGCTCTCGATAATGAGGTAAGGGAGTTTGCCAGAGAGGTATCGATATGGAATGGAAAAAATGAGGCGACGCTTGTATATGATGGGGCTATACAACCCAGTCGTGTTCTTGCTGAAATTGTGGAGTCAGTGGCAGCTGCTATATACGTTGACTTGAACTATGATCTGGACAAACTATGGATGAAATTCAAGCATCTTTTGGAGCCTATAGTTACTCTCGAGGGATTGCCAGATCACCCTGTGACAGTGTTGTTTAAGCTTTGCCAAAAGCATGGAATGCATGTTGAAATCCAGGGGTCGAGAAATGATACCAAAAATTTAAGTATTGCTTGTGTACGTGTTAATGGTTACATCATTGCCTCGGCTTCTTATAAGCATATGGAAATTGCAAGGCTTTCTGCTGCAAGAACAGCTCTATCTGAGTTGTCCAATTCATTCGGCATAAGCTGTAAGTCGGTTAAAGTTGTTGCTGAAAATGAAGCTAAACAGAATTTGAATGTGCTTTGTGACAAGAAGAGGATCCCTAAACCAACTTACAACATAGAGAAACCATCTGGTCCTGCACATGAGAAGAGATTTGTATCATCAGTTGAAATTGCAACTTTAGAGCTAAAAATGATGGGAGATGAAAGGTCGACAATAAAAGATGCGGAGAATTCTGCGGCTGCCTTGATGATCGTTGGTTTACTACAATCTGATGCTATGACCAACACCAAAGAAGCAGCCAATAGTAGGATTGGTTATTTTCCATCAGTACTCTACAGACTTTGGGTTATGATTCGTTGGCTGACAAGGCTGCTTGTTTTTTGTTTCAAGGGAATAAGTCTGTTAGTTATTTTCTTTACTGTGGTCAAATTAGTTATTGGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004525 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016442 GO:0016458 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031332 GO:0032296 GO:0032991 GO:0034641 GO:0035194 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048519 GO:0050789 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DND1_DSRM Ribonuclease_3 dsrm

Protein Analysis

407

Amino Acids

45.51

Weight (kDa)

9.21

Isoelectric Point (pI)

40.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ribonucleas_3_3	PF14622	37 - 168	1.1e-11	Ribonuclease-III-like
Ribonuclease_3	PF00636	58 - 168	9.3e-19	Ribonuclease III domain
DND1_DSRM	PF14709	277 - 345	5.5e-11	double strand RNA binding domain from DEAD END PROTEIN 1
dsrm	PF00035	278 - 343	2.8e-09	Double-stranded RNA binding motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0022435)

Species	Orthologous Gene IDs
malus_domestica	MD11G1212400.v1.1
pyrus_communis	pycom11g18720 pycom11g18730 pycom11g18740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	723
AarI	CACCTGC	1 cut(s)	361
Acc36I	ACCTGC	1 cut(s)	361
AccBSI	CCGCTC	1 cut(s)	273
AccI	GTMKAC	1 cut(s)	986
AccII	CGCG	3 cut(s)	36, 179, 231
AciI	CCGC	8 cut(s)	179, 195, 271, 276, 292, 309, 1001, 1013
AclWI	GGATC	3 cut(s)	255, 865, 878
AcoI	YGGCCR	1 cut(s)	75
AcsI	RAATTY	5 cut(s)	257, 536, 667, 841, 1006
AcuI	CTGAAG	1 cut(s)	26
AcyI	GRCGYC	1 cut(s)	192
AdeI	CACNNNGTG	1 cut(s)	592
AfaI	GTAC	2 cut(s)	687, 1107
AfiI	CCNNNNNNNGG	2 cut(s)	244, 1083
AflIII	ACRYGT	1 cut(s)	688
AgsI	TTSAA	7 cut(s)	106, 508, 541, 638, 847, 944, 1165
AjnI	CCWGG	1 cut(s)	642
AluBI	AGCT	9 cut(s)	40, 131, 268, 488, 610, 764, 798, 833, 961
AluI	AGCT	9 cut(s)	40, 131, 268, 488, 610, 764, 798, 833, 961
Alw21I	GWGCWC	2 cut(s)	186, 270
Alw26I	GTCTC	1 cut(s)	179
AlwI	GGATC	3 cut(s)	255, 865, 878
Ama87I	CYCGRG	1 cut(s)	569
AoxI	GGCC	2 cut(s)	75, 202
ApeKI	GCWGC	6 cut(s)	485, 488, 752, 1016, 1073, 1147
ApoI	RAATTY	5 cut(s)	257, 536, 667, 841, 1006
Asp700I	GAANNNNTTC	1 cut(s)	8
AspLEI	GCGC	2 cut(s)	233, 308
AspS9I	GGNCC	1 cut(s)	908
AsuHPI	GGTGA	2 cut(s)	342, 578
AvaI	CYCGRG	1 cut(s)	569
AvaII	GGWCC	1 cut(s)	908
BamHI	GGATCC	1 cut(s)	870
BanII	GRGCYC	1 cut(s)	270
Bbv12I	GWGCWC	2 cut(s)	186, 270
BbvCI	CCTCAGC	1 cut(s)	19
BbvI	GCAGC	6 cut(s)	475, 497, 739, 1003, 1085, 1134
BccI	CCATC	6 cut(s)	55, 155, 428, 910, 964, 1108
BceAI	ACGGC	1 cut(s)	90
BcgI	CGANNNNNNTGC	2 cut(s)	209, 243
BciT130I	CCWGG	1 cut(s)	644
BcoDI	GTCTC	1 cut(s)	179
BfaI	CTAG	1 cut(s)	122
BfmI	CTRYAG	2 cut(s)	558, 1111
BfuAI	ACCTGC	1 cut(s)	361
BisI	GCNGC	9 cut(s)	195, 309, 486, 489, 753, 1014, 1017, 1074, 1148
BlsI	GCNGC	9 cut(s)	196, 310, 487, 490, 754, 1015, 1018, 1075, 1149
BmcAI	AGTACT	1 cut(s)	1107
Bme1390I	CCNGG	1 cut(s)	644
Bme18I	GGWCC	1 cut(s)	908
BmeT110I	CYCGRG	1 cut(s)	569
BmgT120I	GGNCC	1 cut(s)	908
BmiI	GGNNCC	3 cut(s)	119, 555, 872
BmrFI	CCNGG	1 cut(s)	644
BmrI	ACTGGG	1 cut(s)	444
BmsI	GCATC	3 cut(s)	553, 988, 1039
BmuI	ACTGGG	1 cut(s)	444
BplI	GAGNNNNNCTC	2 cut(s)	257, 289
Bpu10I	CCTNAGC	1 cut(s)	19
Bsa29I	ATCGAT	1 cut(s)	395
BsaAI	YACGTR	1 cut(s)	689
BsaBI	GATNNNNATC	1 cut(s)	931
BsaHI	GRCGYC	1 cut(s)	192
BsaJI	CCNNGG	4 cut(s)	78, 199, 643, 711
Bsc4I	CCNNNNNNNGG	2 cut(s)	244, 1083
Bse1I	ACTGG	1 cut(s)	450
Bse3DI	GCAATG	1 cut(s)	705
Bse8I	GATNNNNATC	1 cut(s)	931
BseBI	CCWGG	1 cut(s)	644
BseCI	ATCGAT	1 cut(s)	395
BseDI	CCNNGG	4 cut(s)	78, 199, 643, 711
BseGI	GGATG	1 cut(s)	537
BseJI	GATNNNNATC	1 cut(s)	931
BseLI	CCNNNNNNNGG	2 cut(s)	244, 1083
BseMI	GCAATG	1 cut(s)	705
BseMII	CTCAG	3 cut(s)	33, 276, 762
BseNI	ACTGG	1 cut(s)	450
BseRI	GAGGAG	1 cut(s)	133
BseXI	GCAGC	6 cut(s)	475, 497, 739, 1003, 1085, 1134
BsgI	GTGCAG	1 cut(s)	897
Bsh1236I	CGCG	3 cut(s)	36, 179, 231
Bsh1285I	CGRYCG	1 cut(s)	34
BshFI	GGCC	2 cut(s)	77, 204
BshVI	ATCGAT	1 cut(s)	395
BsiEI	CGRYCG	1 cut(s)	34
BsiHKAI	GWGCWC	2 cut(s)	186, 270
BsiHKCI	CYCGRG	1 cut(s)	569
BslFI	GGGAC	1 cut(s)	10
BslI	CCNNNNNNNGG	2 cut(s)	244, 1083
BsmAI	GTCTC	1 cut(s)	179
BsmBI	CGTCTC	1 cut(s)	179
BsmFI	GGGAC	1 cut(s)	10
BsmI	GAATGC	1 cut(s)	633
BsnI	GGCC	2 cut(s)	77, 204
BsoBI	CYCGRG	1 cut(s)	569
Bsp1286I	GDGCHC	2 cut(s)	186, 270
Bsp143I	GATC	6 cut(s)	31, 247, 514, 583, 870, 1026
Bsp19I	CCATGG	1 cut(s)	78
Bsp68I	TCGCGA	1 cut(s)	36
BspACI	CCGC	8 cut(s)	179, 195, 271, 276, 292, 309, 1001, 1013
BspANI	GGCC	2 cut(s)	77, 204
BspCNI	CTCAG	3 cut(s)	32, 275, 763
BspDI	ATCGAT	1 cut(s)	395
BspFNI	CGCG	3 cut(s)	36, 179, 231
BspLI	GGNNCC	3 cut(s)	119, 555, 872
BspMI	ACCTGC	1 cut(s)	361
BspPI	GGATC	3 cut(s)	255, 865, 878
BsrBI	CCGCTC	1 cut(s)	273
BsrDI	GCAATG	1 cut(s)	705
BsrI	ACTGG	1 cut(s)	450
BssECI	CCNNGG	4 cut(s)	78, 199, 643, 711
BssMI	GATC	6 cut(s)	31, 247, 514, 583, 870, 1026
BssNI	GRCGYC	1 cut(s)	192
BssT1I	CCWWGG	2 cut(s)	78, 199
Bst2UI	CCWGG	1 cut(s)	644
Bst4CI	ACNGT	2 cut(s)	598, 1198
Bst6I	CTCTTC	3 cut(s)	14, 860, 917
BstACI	GRCGYC	1 cut(s)	192
BstAPI	GCANNNNNTGC	1 cut(s)	628
BstBAI	YACGTR	1 cut(s)	689
BstC8I	GCNNGC	2 cut(s)	38, 304
BstDEI	CTNAG	3 cut(s)	19, 262, 771
BstDSI	CCRYGG	1 cut(s)	78
BstF5I	GGATG	1 cut(s)	537
BstFNI	CGCG	3 cut(s)	36, 179, 231
BstHHI	GCGC	2 cut(s)	233, 308
BstKTI	GATC	6 cut(s)	34, 250, 517, 586, 873, 1029
BstMAI	GTCTC	1 cut(s)	179
BstMBI	GATC	6 cut(s)	31, 247, 514, 583, 870, 1026
BstMCI	CGRYCG	1 cut(s)	34
BstMWI	GCNNNNNNNGC	4 cut(s)	308, 628, 761, 1144
BstNI	CCWGG	1 cut(s)	644
BstNSI	RCATGY	2 cut(s)	306, 635
BstSCI	CCNGG	1 cut(s)	642
BstSFI	CTRYAG	2 cut(s)	558, 1111
BstUI	CGCG	3 cut(s)	36, 179, 231
BstV1I	GCAGC	6 cut(s)	475, 497, 739, 1003, 1085, 1134
BstX2I	RGATCY	1 cut(s)	870
BstXI	CCANNNNNNTGG	1 cut(s)	623
BstYI	RGATCY	1 cut(s)	870
Bsu15I	ATCGAT	1 cut(s)	395
BsuRI	GGCC	2 cut(s)	77, 204
BsuTUI	ATCGAT	1 cut(s)	395
BtgI	CCRYGG	1 cut(s)	78
BtgZI	GCGATG	1 cut(s)	33
BtsCI	GGATG	1 cut(s)	537
BtsIMutI	CAGTG	2 cut(s)	486, 603
BtuMI	TCGCGA	1 cut(s)	36
BveI	ACCTGC	1 cut(s)	361
Cac8I	GCNNGC	2 cut(s)	38, 304
CfoI	GCGC	2 cut(s)	233, 308
Cfr13I	GGNCC	1 cut(s)	908
ClaI	ATCGAT	1 cut(s)	395
CseI	GACGC	4 cut(s)	12, 161, 200, 430
Csp6I	GTAC	2 cut(s)	686, 1106
CviAII	CATG	6 cut(s)	79, 303, 320, 623, 632, 917
CviQI	GTAC	2 cut(s)	686, 1106
DdeI	CTNAG	3 cut(s)	19, 262, 771
DpnI	GATC	6 cut(s)	33, 249, 516, 585, 872, 1028
DpnII	GATC	6 cut(s)	31, 247, 514, 583, 870, 1026
DraIII	CACNNNGTG	1 cut(s)	592
EaeI	YGGCCR	1 cut(s)	75
Eam1104I	CTCTTC	3 cut(s)	14, 860, 917
EarI	CTCTTC	3 cut(s)	14, 860, 917
EciI	GGCGGA	1 cut(s)	265
Ecl136II	GAGCTC	1 cut(s)	268
Eco130I	CCWWGG	2 cut(s)	78, 199
Eco24I	GRGCYC	1 cut(s)	270
Eco47I	GGWCC	1 cut(s)	908
Eco53kI	GAGCTC	1 cut(s)	268
Eco57I	CTGAAG	1 cut(s)	26
Eco88I	CYCGRG	1 cut(s)	569
EcoICRI	GAGCTC	1 cut(s)	268
EcoRI	GAATTC	1 cut(s)	1006
EcoRII	CCWGG	1 cut(s)	642
EcoT14I	CCWWGG	2 cut(s)	78, 199
EcoT22I	ATGCAT	1 cut(s)	633
EcoT38I	GRGCYC	1 cut(s)	270
ErhI	CCWWGG	2 cut(s)	78, 199
Esp3I	CGTCTC	1 cut(s)	179
FaeI	CATG	6 cut(s)	82, 306, 323, 626, 635, 920
FalI	AAGNNNNNCTT	4 cut(s)	209, 241, 664, 696
FaqI	GGGAC	1 cut(s)	10
FatI	CATG	6 cut(s)	78, 302, 319, 622, 631, 916
FauNDI	CATATG	1 cut(s)	729
FblI	GTMKAC	1 cut(s)	986
Fnu4HI	GCNGC	9 cut(s)	195, 309, 486, 489, 753, 1014, 1017, 1074, 1148
FokI	GGATG	1 cut(s)	544
FriOI	GRGCYC	1 cut(s)	270
Fsp4HI	GCNGC	9 cut(s)	195, 309, 486, 489, 753, 1014, 1017, 1074, 1148
FspBI	CTAG	1 cut(s)	122
GlaI	GCGC	2 cut(s)	232, 307
GluI	GCNGC	9 cut(s)	195, 309, 486, 489, 753, 1014, 1017, 1074, 1148
HaeIII	GGCC	2 cut(s)	77, 204
HgaI	GACGC	4 cut(s)	12, 161, 200, 430
HhaI	GCGC	2 cut(s)	233, 308
Hin1I	GRCGYC	1 cut(s)	192
Hin1II	CATG	6 cut(s)	82, 306, 323, 626, 635, 920
Hin6I	GCGC	2 cut(s)	231, 306
HinP1I	GCGC	2 cut(s)	231, 306
HincII	GTYRAC	2 cut(s)	502, 987
HindII	GTYRAC	2 cut(s)	502, 987
HindIII	AAGCTT	1 cut(s)	608
HinfI	GANTC	3 cut(s)	65, 476, 1129
HphI	GGTGA	2 cut(s)	342, 578
Hpy166II	GTNNAC	4 cut(s)	502, 686, 987, 1037
Hpy188I	TCNGA	3 cut(s)	265, 772, 1048
Hpy188III	TCNNGA	6 cut(s)	35, 106, 359, 518, 569, 651
Hpy8I	GTNNAC	4 cut(s)	502, 686, 987, 1037
Hpy99I	CGWCG	2 cut(s)	194, 424
HpyAV	CCTTC	1 cut(s)	347
HpyCH4III	ACNGT	2 cut(s)	598, 1198
HpyCH4IV	ACGT	2 cut(s)	498, 688
HpyCH4V	TGCA	5 cut(s)	631, 740, 755, 914, 950
HpyF10VI	GCNNNNNNNGC	4 cut(s)	308, 628, 761, 1144
HpyF3I	CTNAG	3 cut(s)	19, 262, 771
HpySE526I	ACGT	2 cut(s)	498, 688
Hsp92I	GRCGYC	1 cut(s)	192
Hsp92II	CATG	6 cut(s)	82, 306, 323, 626, 635, 920
HspAI	GCGC	2 cut(s)	231, 306
Kzo9I	GATC	6 cut(s)	31, 247, 514, 583, 870, 1026
LmnI	GCTCC	4 cut(s)	123, 273, 278, 553
Lsp1109I	GCAGC	6 cut(s)	475, 497, 739, 1003, 1085, 1134
LweI	GCATC	3 cut(s)	553, 988, 1039
MaeI	CTAG	1 cut(s)	122
MaeII	ACGT	2 cut(s)	498, 688
MaeIII	GTNAC	6 cut(s)	70, 95, 562, 592, 698, 857
MalI	GATC	6 cut(s)	33, 249, 516, 585, 872, 1028
MbiI	CCGCTC	1 cut(s)	273
MboI	GATC	6 cut(s)	31, 247, 514, 583, 870, 1026
MboII	GAAGA	2 cut(s)	877, 934
MflI	RGATCY	1 cut(s)	870
MhlI	GDGCHC	2 cut(s)	186, 270
MlyI	GAGTC	1 cut(s)	485
Mph1103I	ATGCAT	1 cut(s)	633
MroXI	GAANNNNTTC	1 cut(s)	8
MseI	TTAA	4 cut(s)	606, 671, 693, 810
MspA1I	CMGCKG	2 cut(s)	311, 488
MspR9I	CCNGG	1 cut(s)	644
Mva1269I	GAATGC	1 cut(s)	633
MvaI	CCWGG	1 cut(s)	644
MvnI	CGCG	3 cut(s)	36, 179, 231
MwoI	GCNNNNNNNGC	4 cut(s)	308, 628, 761, 1144
NcoI	CCATGG	1 cut(s)	78
NdeI	CATATG	1 cut(s)	729
NdeII	GATC	6 cut(s)	31, 247, 514, 583, 870, 1026
NlaIII	CATG	6 cut(s)	82, 306, 323, 626, 635, 920
NlaIV	GGNNCC	3 cut(s)	119, 555, 872
NmeAIII	GCCGAG	2 cut(s)	165, 692
NmuCI	GTSAC	3 cut(s)	95, 592, 857
NruI	TCGCGA	1 cut(s)	36
NsiI	ATGCAT	1 cut(s)	633
NspI	RCATGY	2 cut(s)	306, 635
PaeI	GCATGC	1 cut(s)	306
PaeR7I	CTCGAG	1 cut(s)	569
PaqCI	CACCTGC	1 cut(s)	361
PctI	GAATGC	1 cut(s)	633
PdmI	GAANNNNTTC	1 cut(s)	8
PfeI	GAWTC	2 cut(s)	65, 1129
PkrI	GCNGC	9 cut(s)	196, 310, 487, 490, 754, 1015, 1018, 1075, 1149
Ple19I	CGATCG	1 cut(s)	34
PleI	GAGTC	1 cut(s)	484
PpsI	GAGTC	1 cut(s)	484
Ppu21I	YACGTR	1 cut(s)	689
PsiI	TTATAA	1 cut(s)	723
Psp124BI	GAGCTC	1 cut(s)	270
Psp6I	CCWGG	1 cut(s)	642
PspGI	CCWGG	1 cut(s)	642
PspN4I	GGNNCC	3 cut(s)	119, 555, 872
PspPI	GGNCC	1 cut(s)	908
PsuI	RGATCY	1 cut(s)	870
PvuI	CGATCG	1 cut(s)	34
PvuII	CAGCTG	1 cut(s)	488
RruI	TCGCGA	1 cut(s)	36
RsaI	GTAC	2 cut(s)	687, 1107
RsaNI	GTAC	2 cut(s)	686, 1106
SacI	GAGCTC	1 cut(s)	270
SalI	GTCGAC	1 cut(s)	985
SaqAI	TTAA	4 cut(s)	606, 671, 693, 810
SatI	GCNGC	9 cut(s)	195, 309, 486, 489, 753, 1014, 1017, 1074, 1148
Sau3AI	GATC	6 cut(s)	31, 247, 514, 583, 870, 1026
Sau96I	GGNCC	1 cut(s)	908
ScaI	AGTACT	1 cut(s)	1107
SchI	GAGTC	1 cut(s)	485
ScrFI	CCNGG	1 cut(s)	644
SduI	GDGCHC	2 cut(s)	186, 270
SfaNI	GCATC	3 cut(s)	553, 988, 1039
SfcI	CTRYAG	2 cut(s)	558, 1111
Sfr274I	CTCGAG	1 cut(s)	569
SinI	GGWCC	1 cut(s)	908
SlaI	CTCGAG	1 cut(s)	569
SmlI	CTYRAG	1 cut(s)	569
SmoI	CTYRAG	1 cut(s)	569
SphI	GCATGC	1 cut(s)	306
SsiI	CCGC	8 cut(s)	179, 195, 271, 276, 292, 309, 1001, 1013
SspMI	CTAG	1 cut(s)	122
SstI	GAGCTC	1 cut(s)	270
StyD4I	CCNGG	1 cut(s)	642
StyI	CCWWGG	2 cut(s)	78, 199
TaaI	ACNGT	2 cut(s)	598, 1198
TaiI	ACGT	2 cut(s)	501, 691
TaqI	TCGA	6 cut(s)	30, 360, 395, 570, 650, 986
TatI	WGTACW	1 cut(s)	1105
TauI	GCSGC	3 cut(s)	197, 311, 1016
TfiI	GAWTC	2 cut(s)	65, 1129
Tru1I	TTAA	4 cut(s)	606, 671, 693, 810
Tru9I	TTAA	4 cut(s)	606, 671, 693, 810
TscAI	CASTG	2 cut(s)	486, 603
TseFI	GTSAC	3 cut(s)	95, 592, 857
TseI	GCWGC	6 cut(s)	485, 488, 752, 1016, 1073, 1147
Tsp45I	GTSAC	3 cut(s)	95, 592, 857
TspDTI	ATGAA	6 cut(s)	17, 74, 548, 774, 843, 993
TspRI	CASTG	2 cut(s)	486, 603
VpaK11BI	GGWCC	1 cut(s)	908
XapI	RAATTY	5 cut(s)	257, 536, 667, 841, 1006
XceI	RCATGY	2 cut(s)	306, 635
XhoI	CTCGAG	1 cut(s)	569
XmiI	GTMKAC	1 cut(s)	986
XmnI	GAANNNNTTC	1 cut(s)	8
XspI	CTAG	1 cut(s)	122
ZrmI	AGTACT	1 cut(s)	1107
Zsp2I	ATGCAT	1 cut(s)	633

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.