MD11G1220100.v1.1

cation-transporting ATPase activity

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Reverse (-)
32211417 .. 32214272
2856 bp
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UTR
Exon/CDS
Intron
MD11G1220100.v1.1.491

Sequence Viewer

Length: 201 bp
ATGGGTTCAAAGGCATGGAGTTACCCATTTGAAGAAGTAGAAGCCCATACGAGTCAATCTATTGTATATGTTGGCATTGATAGTACTCTTGCCGGTCTCATTTATTTTGAGGATCAGATAAGGGTAGATGCTGGACAAGTTGTTAAATCTTTATCTAAGCAAGGATCGATGTATACATGCTATCTGGGTACAAAACAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

67

Amino Acids

7.31

Weight (kDa)

5.05

Isoelectric Point (pI)

31.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028899)

Species Orthologous Gene IDs
malus_domestica MD11G1220100.v1.1
pyrus_communis pycom03g07630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 173
AclWI GGATC 2 cut(s) 120, 172
AfaI GTAC 2 cut(s) 85, 190
AgsI TTSAA 2 cut(s) 9, 32
Alw26I GTCTC 1 cut(s) 101
AlwI GGATC 2 cut(s) 120, 172
BcoDI GTCTC 1 cut(s) 101
BmcAI AGTACT 1 cut(s) 85
BmsI GCATC 1 cut(s) 118
Bsa29I ATCGAT 1 cut(s) 167
BsaI GGTCTC 1 cut(s) 101
Bse118I RCCGGY 1 cut(s) 92
BseCI ATCGAT 1 cut(s) 167
BshVI ATCGAT 1 cut(s) 167
BsiSI CCGG 1 cut(s) 93
BsmAI GTCTC 1 cut(s) 101
Bso31I GGTCTC 1 cut(s) 101
Bsp143I GATC 2 cut(s) 112, 164
BspDI ATCGAT 1 cut(s) 167
BspPI GGATC 2 cut(s) 120, 172
BspTNI GGTCTC 1 cut(s) 101
BsrFI RCCGGY 1 cut(s) 92
BssAI RCCGGY 1 cut(s) 92
BssMI GATC 2 cut(s) 112, 164
BssNAI GTATAC 1 cut(s) 174
Bst1107I GTATAC 1 cut(s) 174
BstDEI CTNAG 1 cut(s) 156
BstKTI GATC 2 cut(s) 115, 167
BstMAI GTCTC 1 cut(s) 101
BstMBI GATC 2 cut(s) 112, 164
BstNSI RCATGY 1 cut(s) 180
BstZ17I GTATAC 1 cut(s) 174
Bsu15I ATCGAT 1 cut(s) 167
BsuTUI ATCGAT 1 cut(s) 167
Cfr10I RCCGGY 1 cut(s) 92
ClaI ATCGAT 1 cut(s) 167
Csp6I GTAC 2 cut(s) 84, 189
CviAII CATG 2 cut(s) 15, 177
CviJI RGCY 1 cut(s) 44
CviKI_1 RGCY 1 cut(s) 44
CviQI GTAC 2 cut(s) 84, 189
DdeI CTNAG 1 cut(s) 156
DpnI GATC 2 cut(s) 114, 166
DpnII GATC 2 cut(s) 112, 164
Eco31I GGTCTC 1 cut(s) 101
FaeI CATG 2 cut(s) 18, 180
FaiI YATR 6 cut(s) 16, 48, 67, 69, 174, 178
FatI CATG 2 cut(s) 14, 176
FblI GTMKAC 1 cut(s) 173
HapII CCGG 1 cut(s) 93
Hin1II CATG 2 cut(s) 18, 180
HinfI GANTC 1 cut(s) 52
HpaII CCGG 1 cut(s) 93
Hpy166II GTNNAC 1 cut(s) 174
Hpy188I TCNGA 1 cut(s) 117
Hpy8I GTNNAC 1 cut(s) 174
HpyF3I CTNAG 1 cut(s) 156
Hsp92II CATG 2 cut(s) 18, 180
Kzo9I GATC 2 cut(s) 112, 164
LpnPI CCDG 3 cut(s) 106, 117, 170
LweI GCATC 1 cut(s) 118
MaeIII GTNAC 1 cut(s) 20
MalI GATC 2 cut(s) 114, 166
MboI GATC 2 cut(s) 112, 164
MboII GAAGA 1 cut(s) 44
MlyI GAGTC 1 cut(s) 61
MnlI CCTC 1 cut(s) 103
MseI TTAA 1 cut(s) 144
MspI CCGG 1 cut(s) 93
NdeII GATC 2 cut(s) 112, 164
NlaIII CATG 2 cut(s) 18, 180
NspI RCATGY 1 cut(s) 180
PleI GAGTC 1 cut(s) 60
PpsI GAGTC 1 cut(s) 60
RsaI GTAC 2 cut(s) 85, 190
RsaNI GTAC 2 cut(s) 84, 189
SaqAI TTAA 1 cut(s) 144
Sau3AI GATC 2 cut(s) 112, 164
ScaI AGTACT 1 cut(s) 85
SchI GAGTC 1 cut(s) 61
SfaNI GCATC 1 cut(s) 118
SgeI CNNG 9 cut(s) 27, 63, 101, 105, 144, 149, 173, 189, 197
TaqI TCGA 1 cut(s) 167
TatI WGTACW 1 cut(s) 83
Tru1I TTAA 1 cut(s) 144
Tru9I TTAA 1 cut(s) 144
XceI RCATGY 1 cut(s) 180
XmiI GTMKAC 1 cut(s) 173
ZrmI AGTACT 1 cut(s) 85
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.