MD12G1089100.v1.1

Bifunctional purine biosynthesis protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
Physical Location & Seq
Reverse (-)
11070576 .. 11076403
5828 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1089100.v1.1.491

Sequence Viewer

Length: 189 bp
ATGGCAGCGGCTGGGGAGACCCTTACAAATTTGTGGGAGTTTGATGGTAATAGGCAGGCTCTGATATCATTGTCAGATAAGAAGGATCTTGCTGTCTTAGGGAATGGCCTTCAGAACTTGGGATATAAAATTGTTTCGACTGGAGGAACGGCATCTGCTTTAAAAAAGTGCTGGACTGTCAGTCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

63

Amino Acids

6.57

Weight (kDa)

7.91

Isoelectric Point (pI)

11.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022406)

Species Orthologous Gene IDs
malus_domestica MD12G1089100.v1.1
rosa_chinensis RchiOBHm_Chr3g0461401 RchiOBHm_Chr3g0461421
rosa_samantha Rh1AG094000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 8
AclWI GGATC 1 cut(s) 93
AcsI RAATTY 1 cut(s) 28
AcuI CTGAAG 1 cut(s) 95
AhdI GACNNNNNGTC 1 cut(s) 180
Alw26I GTCTC 1 cut(s) 11
AlwI GGATC 1 cut(s) 93
AlwNI CAGNNNCTG 2 cut(s) 11, 61
AoxI GGCC 1 cut(s) 106
ApeKI GCWGC 1 cut(s) 5
ApoI RAATTY 1 cut(s) 28
BbvI GCAGC 1 cut(s) 17
BccI CCATC 1 cut(s) 38
BceAI ACGGC 1 cut(s) 165
BcoDI GTCTC 1 cut(s) 11
BisI GCNGC 2 cut(s) 6, 9
BlsI GCNGC 2 cut(s) 7, 10
BmeRI GACNNNNNGTC 1 cut(s) 180
BmsI GCATC 1 cut(s) 161
BpmI CTGGAG 1 cut(s) 162
BsaI GGTCTC 1 cut(s) 11
Bse1I ACTGG 1 cut(s) 145
BseNI ACTGG 1 cut(s) 145
BseXI GCAGC 1 cut(s) 17
BseYI CCCAGC 1 cut(s) 11
BshFI GGCC 1 cut(s) 108
BsmAI GTCTC 1 cut(s) 11
BsnI GGCC 1 cut(s) 108
Bso31I GGTCTC 1 cut(s) 11
Bsp143I GATC 1 cut(s) 85
BspACI CCGC 1 cut(s) 8
BspANI GGCC 1 cut(s) 108
BspPI GGATC 1 cut(s) 93
BspTNI GGTCTC 1 cut(s) 11
BsrI ACTGG 1 cut(s) 145
BssMI GATC 1 cut(s) 85
Bst4CI ACNGT 1 cut(s) 178
BstC8I GCNNGC 1 cut(s) 57
BstDEI CTNAG 1 cut(s) 97
BstKTI GATC 1 cut(s) 88
BstMAI GTCTC 1 cut(s) 11
BstMBI GATC 1 cut(s) 85
BstV1I GCAGC 1 cut(s) 17
BstX2I RGATCY 1 cut(s) 85
BstYI RGATCY 1 cut(s) 85
BsuRI GGCC 1 cut(s) 108
Cac8I GCNNGC 1 cut(s) 57
CaiI CAGNNNCTG 2 cut(s) 11, 61
CviJI RGCY 3 cut(s) 11, 59, 108
CviKI_1 RGCY 3 cut(s) 11, 59, 108
DdeI CTNAG 1 cut(s) 97
DpnI GATC 1 cut(s) 87
DpnII GATC 1 cut(s) 85
DraI TTTAAA 1 cut(s) 162
DriI GACNNNNNGTC 1 cut(s) 180
Eam1105I GACNNNNNGTC 1 cut(s) 180
Eco31I GGTCTC 1 cut(s) 11
Eco32I GATATC 1 cut(s) 66
Eco57I CTGAAG 1 cut(s) 95
EcoRV GATATC 1 cut(s) 66
FaiI YATR 1 cut(s) 126
Fnu4HI GCNGC 2 cut(s) 6, 9
Fsp4HI GCNGC 2 cut(s) 6, 9
GluI GCNGC 2 cut(s) 6, 9
GsaI CCCAGC 1 cut(s) 15
GsuI CTGGAG 1 cut(s) 162
HaeIII GGCC 1 cut(s) 108
Hpy188I TCNGA 3 cut(s) 63, 76, 114
HpyAV CCTTC 2 cut(s) 76, 119
HpyCH4III ACNGT 1 cut(s) 178
HpyF3I CTNAG 1 cut(s) 97
Kzo9I GATC 1 cut(s) 85
LpnPI CCDG 3 cut(s) 41, 126, 157
Lsp1109I GCAGC 1 cut(s) 17
LweI GCATC 1 cut(s) 161
MaeIII GTNAC 1 cut(s) 182
MalI GATC 1 cut(s) 87
MboI GATC 1 cut(s) 85
MflI RGATCY 1 cut(s) 85
MluCI AATT 2 cut(s) 28, 129
MnlI CCTC 1 cut(s) 137
MseI TTAA 1 cut(s) 161
MspA1I CMGCKG 1 cut(s) 8
NdeII GATC 1 cut(s) 85
NmuCI GTSAC 1 cut(s) 182
PkrI GCNGC 2 cut(s) 7, 10
PspFI CCCAGC 1 cut(s) 11
PstNI CAGNNNCTG 2 cut(s) 11, 61
PsuI RGATCY 1 cut(s) 85
SaqAI TTAA 1 cut(s) 161
SatI GCNGC 2 cut(s) 6, 9
Sau3AI GATC 1 cut(s) 85
SfaNI GCATC 1 cut(s) 161
SgeI CNNG 6 cut(s) 24, 68, 101, 130, 153, 184
Sse9I AATT 2 cut(s) 28, 129
SsiI CCGC 1 cut(s) 8
TaaI ACNGT 1 cut(s) 178
TaqI TCGA 1 cut(s) 137
TasI AATT 2 cut(s) 28, 129
TauI GCSGC 1 cut(s) 11
Tru1I TTAA 1 cut(s) 161
Tru9I TTAA 1 cut(s) 161
TseFI GTSAC 1 cut(s) 182
TseI GCWGC 1 cut(s) 5
Tsp45I GTSAC 1 cut(s) 182
XapI RAATTY 1 cut(s) 28
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.