MD13G1005000.v1.1
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
Physical Location & Seq
Reverse (-)
314022 .. 314959
938 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1005000.v1.1.491

Sequence Viewer

Length: 177 bp
ATGGCTGCAATGGAATCTCTCATTATGGAAAGAGAGGCTAGACTTGAAATTGAGCGACGACAAAATTCCCTCTCATATGAGCACAGGAGAGTTCAAAGAGAGCTTTTAAGTGCTACTCAGAAGGTAGGCTCCATGTGCAATTGTTCTTGCTATTTAGGCAATTTCCTGGAACATTGA

Protein Analysis

59

Amino Acids

6.82

Weight (kDa)

6.71

Isoelectric Point (pI)

42.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0028285)

Species Orthologous Gene IDs
malus_domestica MD13G1005000.v1.1
pyrus_communis pycom08g17680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 64
AgsI TTSAA 2 cut(s) 47, 95
AjnI CCWGG 1 cut(s) 165
AluBI AGCT 1 cut(s) 103
AluI AGCT 1 cut(s) 103
Alw21I GWGCWC 1 cut(s) 84
ApeKI GCWGC 1 cut(s) 5
ApoI RAATTY 1 cut(s) 64
Bbv12I GWGCWC 1 cut(s) 84
BciT130I CCWGG 1 cut(s) 167
BfaI CTAG 1 cut(s) 39
BisI GCNGC 1 cut(s) 6
BlsI GCNGC 1 cut(s) 7
Bme1390I CCNGG 1 cut(s) 167
BmiI GGNNCC 1 cut(s) 130
BmrFI CCNGG 1 cut(s) 167
Bse3DI GCAATG 1 cut(s) 15
BseBI CCWGG 1 cut(s) 167
BseMI GCAATG 1 cut(s) 15
BseMII CTCAG 1 cut(s) 131
BsiHKAI GWGCWC 1 cut(s) 84
Bsp1286I GDGCHC 1 cut(s) 84
BspCNI CTCAG 1 cut(s) 130
BspLI GGNNCC 1 cut(s) 130
BsrDI GCAATG 1 cut(s) 15
Bst2UI CCWGG 1 cut(s) 167
BstDEI CTNAG 1 cut(s) 117
BstMWI GCNNNNNNNGC 2 cut(s) 135, 156
BstNI CCWGG 1 cut(s) 167
BstSCI CCNGG 1 cut(s) 165
CviAII CATG 1 cut(s) 133
CviJI RGCY 4 cut(s) 5, 38, 103, 129
CviKI_1 RGCY 4 cut(s) 5, 38, 103, 129
DdeI CTNAG 1 cut(s) 117
EcoRII CCWGG 1 cut(s) 165
FaeI CATG 1 cut(s) 136
FaiI YATR 4 cut(s) 26, 76, 78, 134
FatI CATG 1 cut(s) 132
FauNDI CATATG 1 cut(s) 76
Fnu4HI GCNGC 1 cut(s) 6
Fsp4HI GCNGC 1 cut(s) 6
FspBI CTAG 1 cut(s) 39
GluI GCNGC 1 cut(s) 6
Hin1II CATG 1 cut(s) 136
HinfI GANTC 1 cut(s) 14
Hpy188I TCNGA 1 cut(s) 120
Hpy99I CGWCG 1 cut(s) 60
HpyAV CCTTC 1 cut(s) 115
HpyCH4V TGCA 2 cut(s) 8, 138
HpyF10VI GCNNNNNNNGC 2 cut(s) 135, 156
HpyF3I CTNAG 1 cut(s) 117
Hsp92II CATG 1 cut(s) 136
LmnI GCTCC 1 cut(s) 134
LpnPI CCDG 2 cut(s) 70, 152
MaeI CTAG 1 cut(s) 39
MfeI CAATTG 1 cut(s) 139
MhlI GDGCHC 1 cut(s) 84
MluCI AATT 4 cut(s) 48, 64, 139, 160
MnlI CCTC 2 cut(s) 28, 80
MseI TTAA 1 cut(s) 107
MspR9I CCNGG 1 cut(s) 167
MunI CAATTG 1 cut(s) 139
MvaI CCWGG 1 cut(s) 167
MwoI GCNNNNNNNGC 2 cut(s) 135, 156
NdeI CATATG 1 cut(s) 76
NlaIII CATG 1 cut(s) 136
NlaIV GGNNCC 1 cut(s) 130
PfeI GAWTC 1 cut(s) 14
PfoI TCCNGGA 1 cut(s) 165
PkrI GCNGC 1 cut(s) 7
Psp6I CCWGG 1 cut(s) 165
PspGI CCWGG 1 cut(s) 165
PspN4I GGNNCC 1 cut(s) 130
SaqAI TTAA 1 cut(s) 107
SatI GCNGC 1 cut(s) 6
ScrFI CCNGG 1 cut(s) 167
SduI GDGCHC 1 cut(s) 84
SetI ASST 2 cut(s) 105, 126
SgeI CNNG 5 cut(s) 51, 56, 97, 145, 159
Sse9I AATT 4 cut(s) 48, 64, 139, 160
SspMI CTAG 1 cut(s) 39
StyD4I CCNGG 1 cut(s) 165
TasI AATT 4 cut(s) 48, 64, 139, 160
TfiI GAWTC 1 cut(s) 14
Tru1I TTAA 1 cut(s) 107
Tru9I TTAA 1 cut(s) 107
TseI GCWGC 1 cut(s) 5
XapI RAATTY 1 cut(s) 64
XspI CTAG 1 cut(s) 39
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.