MD15G1023000.v1.1

Belongs to the cyclin family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
1336887 .. 1338504
1618 bp
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UTR
Exon/CDS
Intron
MD15G1023000.v1.1.491

Sequence Viewer

Length: 186 bp
ATGGTGCGTCATTCTGCGGATGATGGGGCCAGACAAAAAAATCTACCGCCAGAGAATGGAAGAGTCATTGCAGCTGAAACACTGCCTAGAAAGCCAAGCAGTATTGACGAGGGAGGTGGGAACGACATTGTTCTGCGCAAACTAACGGAAGTAAGATTGATATTGACCGGATTAGAGATGCTATGA

Protein Analysis

62

Amino Acids

6.65

Weight (kDa)

6.55

Isoelectric Point (pI)

35.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0028358)

Species Orthologous Gene IDs
malus_domestica MD15G1023000.v1.1
pyrus_communis pycom15g01920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 137
AccB7I CCANNNNNTGG 1 cut(s) 56
AciI CCGC 2 cut(s) 17, 47
AfiI CCNNNNNNNGG 1 cut(s) 56
AluBI AGCT 1 cut(s) 74
AluI AGCT 1 cut(s) 74
AoxI GGCC 1 cut(s) 27
ApeKI GCWGC 1 cut(s) 71
AspLEI GCGC 1 cut(s) 138
AspS9I GGNCC 1 cut(s) 27
BbvI GCAGC 1 cut(s) 83
BccI CCATC 1 cut(s) 17
BfaI CTAG 1 cut(s) 87
BisI GCNGC 1 cut(s) 72
BlsI GCNGC 1 cut(s) 73
BmgT120I GGNCC 1 cut(s) 27
BmiI GGNNCC 1 cut(s) 28
BmsI GCATC 1 cut(s) 168
BsaWI WCCGGW 1 cut(s) 167
Bsc4I CCNNNNNNNGG 1 cut(s) 56
Bse3DI GCAATG 1 cut(s) 66
BseGI GGATG 1 cut(s) 25
BseLI CCNNNNNNNGG 1 cut(s) 56
BseMI GCAATG 1 cut(s) 66
BseXI GCAGC 1 cut(s) 83
BshFI GGCC 1 cut(s) 29
BsiSI CCGG 1 cut(s) 168
BslI CCNNNNNNNGG 1 cut(s) 56
BsnI GGCC 1 cut(s) 29
BspACI CCGC 2 cut(s) 17, 47
BspANI GGCC 1 cut(s) 29
BspLI GGNNCC 1 cut(s) 28
BsrDI GCAATG 1 cut(s) 66
Bst6I CTCTTC 1 cut(s) 55
BstF5I GGATG 1 cut(s) 25
BstHHI GCGC 1 cut(s) 138
BstMWI GCNNNNNNNGC 1 cut(s) 91
BstV1I GCAGC 1 cut(s) 83
BsuRI GGCC 1 cut(s) 29
BtsCI GGATG 1 cut(s) 25
BtsI GCAGTG 1 cut(s) 80
BtsIMutI CAGTG 1 cut(s) 80
CfoI GCGC 1 cut(s) 138
Cfr13I GGNCC 1 cut(s) 27
CviJI RGCY 3 cut(s) 29, 74, 94
CviKI_1 RGCY 3 cut(s) 29, 74, 94
Eam1104I CTCTTC 1 cut(s) 55
EarI CTCTTC 1 cut(s) 55
FaiI YATR 1 cut(s) 184
Fnu4HI GCNGC 1 cut(s) 72
FokI GGATG 1 cut(s) 32
Fsp4HI GCNGC 1 cut(s) 72
FspBI CTAG 1 cut(s) 87
FspI TGCGCA 1 cut(s) 137
GlaI GCGC 1 cut(s) 137
GluI GCNGC 1 cut(s) 72
HaeIII GGCC 1 cut(s) 29
HapII CCGG 1 cut(s) 168
HhaI GCGC 1 cut(s) 138
Hin6I GCGC 1 cut(s) 136
HinP1I GCGC 1 cut(s) 136
HinfI GANTC 1 cut(s) 63
HpaII CCGG 1 cut(s) 168
HpyCH4V TGCA 1 cut(s) 71
HpyF10VI GCNNNNNNNGC 1 cut(s) 91
HspAI GCGC 1 cut(s) 136
LpnPI CCDG 3 cut(s) 43, 63, 181
Lsp1109I GCAGC 1 cut(s) 83
LweI GCATC 1 cut(s) 168
MaeI CTAG 1 cut(s) 87
MboII GAAGA 1 cut(s) 72
MlyI GAGTC 1 cut(s) 72
MnlI CCTC 2 cut(s) 103, 107
MspA1I CMGCKG 1 cut(s) 74
MspI CCGG 1 cut(s) 168
MwoI GCNNNNNNNGC 1 cut(s) 91
NlaIV GGNNCC 1 cut(s) 28
NsbI TGCGCA 1 cut(s) 137
PflMI CCANNNNNTGG 1 cut(s) 56
PkrI GCNGC 1 cut(s) 73
PleI GAGTC 1 cut(s) 71
PpsI GAGTC 1 cut(s) 71
PspN4I GGNNCC 1 cut(s) 28
PspPI GGNCC 1 cut(s) 27
PvuII CAGCTG 1 cut(s) 74
SatI GCNGC 1 cut(s) 72
Sau96I GGNCC 1 cut(s) 27
SchI GAGTC 1 cut(s) 72
SetI ASST 2 cut(s) 76, 118
SfaNI GCATC 1 cut(s) 168
SgeI CNNG 6 cut(s) 42, 62, 99, 108, 121, 180
SsiI CCGC 2 cut(s) 17, 47
SspMI CTAG 1 cut(s) 87
TscAI CASTG 1 cut(s) 87
TseI GCWGC 1 cut(s) 71
TspGWI ACGGA 1 cut(s) 161
TspRI CASTG 1 cut(s) 87
Van91I CCANNNNNTGG 1 cut(s) 56
XspI CTAG 1 cut(s) 87
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.