MD15G1089700.v1.1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0022338
Physical Location & Seq
Reverse (-)
6231315 .. 6232886
1572 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1089700.v1.1.491

Sequence Viewer

Length: 1572 bp
ATGTCTCGTCGTCGAAGCGCCACCGCCGCCAACAACTCACGGCCAATTGTGGGATCCTTCAGAAGTTTTATTTTCTTCAGATGGTTGTCCAGGTCTCCATTCAAGAACTCGAAGACCACGAAGAAGAATAAGTCGTCGGCGGATGATACAAGTGGTCATCGTCTCCATCAGTCCTACAGAACTCGGAAGAGCGACCTGGCCACCACCGTGTTTCAGTATCTACCTGAAGCAAAAACCACCTGCTTCAAATTCGGAGGGGAGTTTCAATACTGCTGCGACTTATTCCCCGAAGAAATCCTACGGGAAATCCTGTTGAGGTTGCCGTCAGTCAAATCTATAATCAAGTGCAGCGCCGTGTGCAGGTCATGGAGATATTTGATCCAAACCCCGTCCTTCATCGCCGCCCATCTCCGCTGCCGGCTCAGCCTCAACGGTGACTGTAGTCTCCATCTAGTAAGAAACCGCTCCCACATTGGTGGTTACTTGTTGTATTGGGATAAGCCCGCTGCTTCTGCTTCTGGTGATTCTTCCGGATTTGTTGGTGGTGAGTCTTCCGGTTCCTTTAGCATTAACAGTAGCAATACCAAGATTATAACTCCTTTGACTTACAAATCGACTACTCGCGGTCGCGGAATCGAAGAAATTACTTGTTCACAACCATGTTACGATCTGGTGGGGACTTGCAACGGCCTCATATGCCTTGCTAATGACGCCCACTTCTCCCCCGAAGTCCCCACATTAATTTGGAACCCTTCGGTTAGAAAGTTTGTGACTTTACCCCTTCCAAGCATTGCCATCCCCGATACTGTTTATGACACAGACAGTGATCATTGGGTTATACCCACTTCGGCGTTTGGCTACGATTCCCGCACCGGTGACTATAAGGTCTTGAGAATTTTCAGTAATTTTTACTGTGGCGGTGCTGCCGGGGACACCCCATTTGGGGTTGAGGTTTTCTCCTTGGCAAGGGGCTCCTGGAAGACTCTTAGTCCTTGTGTTTCTATTCCTGGCTGCTTTGCTCTGTGTCGCAGGAACCCCCGTCCTAGACATGTTTTCGTCAACGGTGCTGTGCATTGGCTTCTACCCCGCGGCCGACACTCTGACCAATTTGTCATTGTGTCGTTTGATATGCTCACGGAATCATTCGGCGAGGTAGAGATGCCCGAACCTCTGAGAAATCCACCAGGCCCCCCACCCAGTCCCATTATTTCAGTGCATGAGGAGGATTCCCTTGCCTTGCTTGAGGCCGACTGGGATCTCACAAGATCGGGAGTAGAAGTTTGCCATCTCACGTTATGGGTCATGCAACGGTATGGTATGGTGGACTCGTGGACTAATTTAACCGTAACCCTGCACGAGCCAGACTCTTGTCCCATCCCCATTGGTTCTAAAAGCAATGGCGAACAAGTGTTCAGCATGACGACCAAGAGTGGTTGTGCTCTGTTAACGGTGGACTTCAAGACCAAACGAGTTAGTTATTCTGGAGTTGAAGAGGGATGGAAATACAATTCCATGGATCCTTTTGTGGAGAGCCTAGTCTTACTTGGCCAATCCAATGCTCATTCTTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1 FBA_3

Protein Analysis

524

Amino Acids

58.21

Weight (kDa)

8.56

Isoelectric Point (pI)

47.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 95 - 132 5.3e-07 F-box domain
F-box-like PF12937 96 - 131 1.7e-07 F-box-like
FBA_3 PF08268 216 - 490 1.3e-16 F-box associated beta propeller domain
FBA_1 PF07734 221 - 466 1.9e-19 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0022338)

Species Orthologous Gene IDs
malus_domestica MD08G1108400.v1.1 MD15G1089700.v1.1
pyrus_communis pycom08g09030 pycom15g08330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 593
AarI CACCTGC 1 cut(s) 248
AasI GACNNNNNNGTC 2 cut(s) 884, 1109
Acc36I ACCTGC 2 cut(s) 248, 351
AccBSI CCGCTC 1 cut(s) 465
AccII CGCG 3 cut(s) 624, 630, 1089
AccIII TCCGGA 1 cut(s) 530
AclWI GGATC 6 cut(s) 48, 61, 373, 1263, 1511, 1524
AcoI YGGCCR 4 cut(s) 41, 198, 1090, 1546
AcsI RAATTY 2 cut(s) 248, 894
AcuI CTGAAG 3 cut(s) 43, 61, 246
AcyI GRCGYC 1 cut(s) 711
AfiI CCNNNNNNNGG 5 cut(s) 50, 360, 942, 943, 966
AflIII ACRYGT 1 cut(s) 1048
AgeI ACCGGT 1 cut(s) 872
AgsI TTSAA 5 cut(s) 103, 247, 266, 1459, 1490
AhdI GACNNNNNGTC 1 cut(s) 987
AjnI CCWGG 5 cut(s) 89, 195, 974, 1006, 1183
AleI CACNNNNGTG 2 cut(s) 206, 474
Alw21I GWGCWC 1 cut(s) 1441
Alw26I GTCTC 4 cut(s) 9, 99, 167, 449
AlwI GGATC 6 cut(s) 48, 61, 373, 1263, 1511, 1524
Aor13HI TCCGGA 1 cut(s) 530
AoxI GGCC 7 cut(s) 41, 198, 688, 1090, 1186, 1245, 1546
ApeKI GCWGC 6 cut(s) 273, 348, 414, 506, 923, 1011
ApoI RAATTY 2 cut(s) 248, 894
ArsI GACNNNNNNTTYG 2 cut(s) 923, 955
AseI ATTAAT 1 cut(s) 740
AsiGI ACCGGT 1 cut(s) 872
AspLEI GCGC 2 cut(s) 20, 353
AspS9I GGNCC 1 cut(s) 1187
AsuC2I CCSGG 1 cut(s) 928
AsuHPI GGTGA 4 cut(s) 446, 533, 557, 887
BalI TGGCCA 2 cut(s) 200, 1548
BamHI GGATCC 2 cut(s) 53, 1516
BanII GRGCYC 1 cut(s) 974
BarI GAAGNNNNNNTAC 2 cut(s) 282, 314
BauI CACGAG 2 cut(s) 1327, 1355
BbsI GAAGAC 3 cut(s) 119, 543, 986
Bbv12I GWGCWC 1 cut(s) 1441
BbvI GCAGC 6 cut(s) 260, 360, 401, 493, 910, 998
BccI CCATC 8 cut(s) 75, 174, 414, 456, 803, 1293, 1382, 1491
BceAI ACGGC 4 cut(s) 56, 307, 338, 703
BciT130I CCWGG 5 cut(s) 91, 197, 976, 1008, 1185
BclI TGATCA 1 cut(s) 826
BcnI CCSGG 1 cut(s) 928
BcoDI GTCTC 4 cut(s) 9, 99, 167, 449
BfaI CTAG 3 cut(s) 452, 1044, 1535
BfmI CTRYAG 2 cut(s) 175, 439
BfoI RGCGCY 2 cut(s) 21, 354
BfuAI ACCTGC 2 cut(s) 248, 351
BisI GCNGC 9 cut(s) 27, 274, 349, 402, 415, 507, 924, 1012, 1090
BlpI GCTNAGC 1 cut(s) 422
BlsI GCNGC 9 cut(s) 28, 275, 350, 403, 416, 508, 925, 1013, 1091
Bme1390I CCNGG 6 cut(s) 91, 197, 928, 976, 1008, 1185
BmeRI GACNNNNNGTC 1 cut(s) 987
BmgT120I GGNCC 1 cut(s) 1187
BmiI GGNNCC 7 cut(s) 55, 559, 749, 973, 1034, 1189, 1518
BmrFI CCNGG 6 cut(s) 91, 197, 928, 976, 1008, 1185
BmrI ACTGGG 2 cut(s) 1191, 1261
BmsI GCATC 1 cut(s) 1149
BmuI ACTGGG 2 cut(s) 1191, 1261
BoxI GACNNNNGTC 2 cut(s) 441, 1368
BpiI GAAGAC 3 cut(s) 119, 543, 986
BplI GAGNNNNNCTC 4 cut(s) 941, 973, 1349, 1381
BpmI CTGGAG 1 cut(s) 1503
Bpu1102I GCTNAGC 1 cut(s) 422
BpuEI CTTGAG 2 cut(s) 910, 1262
BpuMI CCSGG 1 cut(s) 928
BsaHI GRCGYC 1 cut(s) 711
BsaI GGTCTC 1 cut(s) 99
BsaJI CCNNGG 4 cut(s) 927, 960, 1087, 1512
BsaWI WCCGGW 3 cut(s) 530, 554, 872
BsaXI ACNNNNNCTCC 2 cut(s) 1263, 1293
Bsc4I CCNNNNNNNGG 5 cut(s) 50, 360, 942, 943, 966
Bse118I RCCGGY 2 cut(s) 417, 872
Bse1I ACTGG 2 cut(s) 1197, 1256
Bse3DI GCAATG 2 cut(s) 789, 1402
BseAI TCCGGA 1 cut(s) 530
BseBI CCWGG 5 cut(s) 91, 197, 976, 1008, 1185
BseDI CCNNGG 4 cut(s) 927, 960, 1087, 1512
BseGI GGATG 4 cut(s) 148, 795, 1374, 1502
BseLI CCNNNNNNNGG 5 cut(s) 50, 360, 942, 943, 966
BseMI GCAATG 2 cut(s) 789, 1402
BseMII CTCAG 2 cut(s) 436, 1163
BseNI ACTGG 2 cut(s) 1197, 1256
BseRI GAGGAG 1 cut(s) 1235
BseX3I CGGCCG 1 cut(s) 1090
BseXI GCAGC 6 cut(s) 260, 360, 401, 493, 910, 998
BsgI GTGCAG 3 cut(s) 367, 379, 1337
Bsh1236I CGCG 3 cut(s) 624, 630, 1089
Bsh1285I CGRYCG 2 cut(s) 628, 1093
BshFI GGCC 7 cut(s) 43, 200, 690, 1092, 1188, 1247, 1548
BshTI ACCGGT 1 cut(s) 872
BsiEI CGRYCG 2 cut(s) 628, 1093
BsiHKAI GWGCWC 1 cut(s) 1441
BsiSI CCGG 5 cut(s) 418, 531, 555, 873, 927
BslFI GGGAC 5 cut(s) 691, 716, 944, 1185, 1356
BslI CCNNNNNNNGG 5 cut(s) 50, 360, 942, 943, 966
BsmAI GTCTC 4 cut(s) 9, 99, 167, 449
BsmBI CGTCTC 1 cut(s) 167
BsmFI GGGAC 5 cut(s) 691, 716, 944, 1185, 1356
BsnI GGCC 7 cut(s) 43, 200, 690, 1092, 1188, 1247, 1548
Bso31I GGTCTC 1 cut(s) 99
Bsp1286I GDGCHC 2 cut(s) 974, 1441
Bsp13I TCCGGA 1 cut(s) 530
Bsp143I GATC 7 cut(s) 53, 378, 667, 826, 1255, 1265, 1516
Bsp1720I GCTNAGC 1 cut(s) 422
Bsp19I CCATGG 1 cut(s) 1512
BspANI GGCC 7 cut(s) 43, 200, 690, 1092, 1188, 1247, 1548
BspCNI CTCAG 2 cut(s) 435, 1164
BspEI TCCGGA 1 cut(s) 530
BspFNI CGCG 3 cut(s) 624, 630, 1089
BspLI GGNNCC 7 cut(s) 55, 559, 749, 973, 1034, 1189, 1518
BspMI ACCTGC 2 cut(s) 248, 351
BspPI GGATC 6 cut(s) 48, 61, 373, 1263, 1511, 1524
BspQI GCTCTTC 1 cut(s) 182
BspTNI GGTCTC 1 cut(s) 99
BsrBI CCGCTC 1 cut(s) 465
BsrDI GCAATG 2 cut(s) 789, 1402
BsrFI RCCGGY 2 cut(s) 417, 872
BsrI ACTGG 2 cut(s) 1197, 1256
BssAI RCCGGY 2 cut(s) 417, 872
BssECI CCNNGG 4 cut(s) 927, 960, 1087, 1512
BssMI GATC 7 cut(s) 53, 378, 667, 826, 1255, 1265, 1516
BssNI GRCGYC 1 cut(s) 711
BssSI CACGAG 2 cut(s) 1327, 1355
BssT1I CCWWGG 2 cut(s) 960, 1512
Bst2BI CACGAG 2 cut(s) 1327, 1355
Bst2UI CCWGG 5 cut(s) 91, 197, 976, 1008, 1185
Bst6I CTCTTC 2 cut(s) 182, 1485
BstACI GRCGYC 1 cut(s) 711
BstC8I GCNNGC 2 cut(s) 419, 504
BstDEI CTNAG 3 cut(s) 422, 986, 1172
BstDSI CCRYGG 2 cut(s) 1087, 1512
BstENI CCTNNNNNAGG 1 cut(s) 964
BstF5I GGATG 4 cut(s) 148, 795, 1374, 1502
BstFNI CGCG 3 cut(s) 624, 630, 1089
BstH2I RGCGCY 2 cut(s) 21, 354
BstHHI GCGC 2 cut(s) 20, 353
BstKTI GATC 7 cut(s) 56, 381, 670, 829, 1258, 1268, 1519
BstMAI GTCTC 4 cut(s) 9, 99, 167, 449
BstMBI GATC 7 cut(s) 53, 378, 667, 826, 1255, 1265, 1516
BstMCI CGRYCG 2 cut(s) 628, 1093
BstMWI GCNNNNNNNGC 6 cut(s) 26, 357, 423, 512, 696, 710
BstNI CCWGG 5 cut(s) 91, 197, 976, 1008, 1185
BstNSI RCATGY 1 cut(s) 1052
BstPAI GACNNNNGTC 2 cut(s) 441, 1368
BstSCI CCNGG 6 cut(s) 89, 195, 926, 974, 1006, 1183
BstSFI CTRYAG 2 cut(s) 175, 439
BstUI CGCG 3 cut(s) 624, 630, 1089
BstV1I GCAGC 6 cut(s) 260, 360, 401, 493, 910, 998
BstV2I GAAGAC 3 cut(s) 119, 543, 986
BstX2I RGATCY 3 cut(s) 53, 1255, 1516
BstXI CCANNNNNNTGG 1 cut(s) 476
BstYI RGATCY 3 cut(s) 53, 1255, 1516
BstZI CGGCCG 1 cut(s) 1090
BsuRI GGCC 7 cut(s) 43, 200, 690, 1092, 1188, 1247, 1548
BtgI CCRYGG 2 cut(s) 1087, 1512
BtgZI GCGATG 1 cut(s) 382
BtsCI GGATG 4 cut(s) 148, 795, 1374, 1502
BtsIMutI CAGTG 2 cut(s) 829, 1218
BveI ACCTGC 2 cut(s) 248, 351
Cac8I GCNNGC 2 cut(s) 419, 504
CfoI GCGC 2 cut(s) 20, 353
Cfr10I RCCGGY 2 cut(s) 417, 872
Cfr13I GGNCC 1 cut(s) 1187
Cfr42I CCGCGG 1 cut(s) 1090
CseI GACGC 1 cut(s) 719
CspAI ACCGGT 1 cut(s) 872
CviAII CATG 7 cut(s) 366, 660, 1049, 1217, 1303, 1417, 1513
DdeI CTNAG 3 cut(s) 422, 986, 1172
DpnI GATC 7 cut(s) 55, 380, 669, 828, 1257, 1267, 1518
DpnII GATC 7 cut(s) 53, 378, 667, 826, 1255, 1265, 1516
DrdI GACNNNNNNGTC 2 cut(s) 884, 1109
DriI GACNNNNNGTC 1 cut(s) 987
DseDI GACNNNNNNGTC 2 cut(s) 884, 1109
EaeI YGGCCR 4 cut(s) 41, 198, 1090, 1546
EagI CGGCCG 1 cut(s) 1090
Eam1104I CTCTTC 2 cut(s) 182, 1485
Eam1105I GACNNNNNGTC 1 cut(s) 987
EarI CTCTTC 2 cut(s) 182, 1485
EciI GGCGGA 1 cut(s) 155
EclXI CGGCCG 1 cut(s) 1090
Eco130I CCWWGG 2 cut(s) 960, 1512
Eco24I GRGCYC 1 cut(s) 974
Eco31I GGTCTC 1 cut(s) 99
Eco52I CGGCCG 1 cut(s) 1090
Eco57I CTGAAG 3 cut(s) 43, 61, 246
EcoNI CCTNNNNNAGG 1 cut(s) 964
EcoO109I RGGNCCY 1 cut(s) 1187
EcoRII CCWGG 5 cut(s) 89, 195, 974, 1006, 1183
EcoT14I CCWWGG 2 cut(s) 960, 1512
EcoT38I GRGCYC 1 cut(s) 974
ErhI CCWWGG 2 cut(s) 960, 1512
Esp3I CGTCTC 1 cut(s) 167
FaeI CATG 7 cut(s) 369, 663, 1052, 1220, 1306, 1420, 1516
FaqI GGGAC 5 cut(s) 691, 716, 944, 1185, 1356
FatI CATG 7 cut(s) 365, 659, 1048, 1216, 1302, 1416, 1512
FauI CCCGC 3 cut(s) 511, 875, 1094
FauNDI CATATG 1 cut(s) 695
FbaI TGATCA 1 cut(s) 826
Fnu4HI GCNGC 9 cut(s) 27, 274, 349, 402, 415, 507, 924, 1012, 1090
FokI GGATG 4 cut(s) 155, 782, 1361, 1509
FriOI GRGCYC 1 cut(s) 974
Fsp4HI GCNGC 9 cut(s) 27, 274, 349, 402, 415, 507, 924, 1012, 1090
FspBI CTAG 3 cut(s) 452, 1044, 1535
GlaI GCGC 2 cut(s) 19, 352
GluI GCNGC 9 cut(s) 27, 274, 349, 402, 415, 507, 924, 1012, 1090
GsuI CTGGAG 1 cut(s) 1503
HaeII RGCGCY 2 cut(s) 21, 354
HaeIII GGCC 7 cut(s) 43, 200, 690, 1092, 1188, 1247, 1548
HapII CCGG 5 cut(s) 418, 531, 555, 873, 927
HgaI GACGC 1 cut(s) 719
HhaI GCGC 2 cut(s) 20, 353
Hin1I GRCGYC 1 cut(s) 711
Hin1II CATG 7 cut(s) 369, 663, 1052, 1220, 1306, 1420, 1516
Hin6I GCGC 2 cut(s) 18, 351
HinP1I GCGC 2 cut(s) 18, 351
HincII GTYRAC 2 cut(s) 1060, 1446
HindII GTYRAC 2 cut(s) 1060, 1446
HinfI GANTC 9 cut(s) 524, 548, 633, 863, 982, 1139, 1226, 1325, 1364
HpaI GTTAAC 1 cut(s) 1446
HpaII CCGG 5 cut(s) 418, 531, 555, 873, 927
HphI GGTGA 4 cut(s) 446, 533, 557, 887
Hpy166II GTNNAC 6 cut(s) 653, 1060, 1324, 1332, 1446, 1453
Hpy188I TCNGA 6 cut(s) 62, 80, 186, 254, 1102, 1173
Hpy188III TCNNGA 6 cut(s) 103, 531, 889, 1269, 1459, 1482
Hpy8I GTNNAC 6 cut(s) 653, 1060, 1324, 1332, 1446, 1453
Hpy99I CGWCG 3 cut(s) 12, 15, 139
HpyAV CCTTC 4 cut(s) 67, 403, 762, 791
HpyCH4IV ACGT 1 cut(s) 1292
HpyCH4V TGCA 7 cut(s) 348, 360, 684, 1072, 1216, 1306, 1354
HpyF10VI GCNNNNNNNGC 6 cut(s) 26, 357, 423, 512, 696, 710
HpyF3I CTNAG 3 cut(s) 422, 986, 1172
HpySE526I ACGT 1 cut(s) 1292
Hsp92I GRCGYC 1 cut(s) 711
Hsp92II CATG 7 cut(s) 369, 663, 1052, 1220, 1306, 1420, 1516
HspAI GCGC 2 cut(s) 18, 351
Kpn2I TCCGGA 1 cut(s) 530
KroI GCCGGC 1 cut(s) 417
KroNI GCCGGC 1 cut(s) 419
Ksp22I TGATCA 1 cut(s) 826
KspAI GTTAAC 1 cut(s) 1446
KspI CCGCGG 1 cut(s) 1090
Kzo9I GATC 7 cut(s) 53, 378, 667, 826, 1255, 1265, 1516
LguI GCTCTTC 1 cut(s) 182
LmnI GCTCC 2 cut(s) 470, 977
Lsp1109I GCAGC 6 cut(s) 260, 360, 401, 493, 910, 998
LweI GCATC 1 cut(s) 1149
MaeI CTAG 3 cut(s) 452, 1044, 1535
MaeII ACGT 1 cut(s) 1292
MaeIII GTNAC 6 cut(s) 434, 479, 662, 769, 875, 1345
MalI GATC 7 cut(s) 55, 380, 669, 828, 1257, 1267, 1518
MbiI CCGCTC 1 cut(s) 465
MboI GATC 7 cut(s) 53, 378, 667, 826, 1255, 1265, 1516
MfeI CAATTG 1 cut(s) 45
MflI RGATCY 3 cut(s) 53, 1255, 1516
MhlI GDGCHC 2 cut(s) 974, 1441
MlsI TGGCCA 2 cut(s) 200, 1548
MluCI AATT 9 cut(s) 45, 248, 642, 741, 894, 904, 1106, 1336, 1507
MluNI TGGCCA 2 cut(s) 200, 1548
MlyI GAGTC 4 cut(s) 557, 976, 1319, 1358
Mox20I TGGCCA 2 cut(s) 200, 1548
MroI TCCGGA 1 cut(s) 530
MroNI GCCGGC 1 cut(s) 417
MscI TGGCCA 2 cut(s) 200, 1548
MseI TTAA 4 cut(s) 570, 740, 1340, 1445
MslI CAYNNNNRTG 3 cut(s) 206, 474, 658
Msp20I TGGCCA 2 cut(s) 200, 1548
MspA1I CMGCKG 3 cut(s) 414, 506, 1089
MspI CCGG 5 cut(s) 418, 531, 555, 873, 927
MspR9I CCNGG 6 cut(s) 91, 197, 928, 976, 1008, 1185
MunI CAATTG 1 cut(s) 45
MvaI CCWGG 5 cut(s) 91, 197, 976, 1008, 1185
MvnI CGCG 3 cut(s) 624, 630, 1089
MwoI GCNNNNNNNGC 6 cut(s) 26, 357, 423, 512, 696, 710
NaeI GCCGGC 1 cut(s) 419
NciI CCSGG 1 cut(s) 928
NcoI CCATGG 1 cut(s) 1512
NdeI CATATG 1 cut(s) 695
NdeII GATC 7 cut(s) 53, 378, 667, 826, 1255, 1265, 1516
NgoMIV GCCGGC 1 cut(s) 417
NlaIII CATG 7 cut(s) 369, 663, 1052, 1220, 1306, 1420, 1516
NlaIV GGNNCC 7 cut(s) 55, 559, 749, 973, 1034, 1189, 1518
NmuCI GTSAC 3 cut(s) 434, 769, 875
NspI RCATGY 1 cut(s) 1052
OliI CACNNNNGTG 2 cut(s) 206, 474
PaqCI CACCTGC 1 cut(s) 248
PciI ACATGT 1 cut(s) 1048
PciSI GCTCTTC 1 cut(s) 182
PcsI WCGNNNNNNNCGW 1 cut(s) 116
PdiI GCCGGC 1 cut(s) 419
PfeI GAWTC 5 cut(s) 524, 633, 863, 1139, 1226
PfoI TCCNGGA 1 cut(s) 974
PinAI ACCGGT 1 cut(s) 872
PkrI GCNGC 9 cut(s) 28, 275, 350, 403, 416, 508, 925, 1013, 1091
PleI GAGTC 4 cut(s) 556, 976, 1319, 1358
PpsI GAGTC 4 cut(s) 556, 976, 1319, 1358
PscI ACATGT 1 cut(s) 1048
PshAI GACNNNNGTC 2 cut(s) 441, 1368
PshBI ATTAAT 1 cut(s) 740
PsiI TTATAA 1 cut(s) 593
Psp6I CCWGG 5 cut(s) 89, 195, 974, 1006, 1183
PspGI CCWGG 5 cut(s) 89, 195, 974, 1006, 1183
PspN4I GGNNCC 7 cut(s) 55, 559, 749, 973, 1034, 1189, 1518
PspPI GGNCC 1 cut(s) 1187
PsuI RGATCY 3 cut(s) 53, 1255, 1516
RseI CAYNNNNRTG 3 cut(s) 206, 474, 658
SacII CCGCGG 1 cut(s) 1090
SapI GCTCTTC 1 cut(s) 182
SaqAI TTAA 4 cut(s) 570, 740, 1340, 1445
SatI GCNGC 9 cut(s) 27, 274, 349, 402, 415, 507, 924, 1012, 1090
Sau3AI GATC 7 cut(s) 53, 378, 667, 826, 1255, 1265, 1516
Sau96I GGNCC 1 cut(s) 1187
SchI GAGTC 4 cut(s) 557, 976, 1319, 1358
ScrFI CCNGG 6 cut(s) 91, 197, 928, 976, 1008, 1185
SduI GDGCHC 2 cut(s) 974, 1441
SfaNI GCATC 1 cut(s) 1149
SfcI CTRYAG 2 cut(s) 175, 439
Sfr303I CCGCGG 1 cut(s) 1090
SgrAI CRCCGGYG 1 cut(s) 872
SgrBI CCGCGG 1 cut(s) 1090
SmiMI CAYNNNNRTG 3 cut(s) 206, 474, 658
SmlI CTYRAG 2 cut(s) 889, 1241
SmoI CTYRAG 2 cut(s) 889, 1241
Sse9I AATT 9 cut(s) 45, 248, 642, 741, 894, 904, 1106, 1336, 1507
SspMI CTAG 3 cut(s) 452, 1044, 1535
StyD4I CCNGG 6 cut(s) 89, 195, 926, 974, 1006, 1183
StyI CCWWGG 2 cut(s) 960, 1512
TaiI ACGT 1 cut(s) 1295
TaqI TCGA 4 cut(s) 13, 110, 614, 636
TasI AATT 9 cut(s) 45, 248, 642, 741, 894, 904, 1106, 1336, 1507
TauI GCSGC 3 cut(s) 29, 404, 1092
TfiI GAWTC 5 cut(s) 524, 633, 863, 1139, 1226
Tru1I TTAA 4 cut(s) 570, 740, 1340, 1445
Tru9I TTAA 4 cut(s) 570, 740, 1340, 1445
TscAI CASTG 2 cut(s) 829, 1218
TseFI GTSAC 3 cut(s) 434, 769, 875
TseI GCWGC 6 cut(s) 273, 348, 414, 506, 923, 1011
Tsp45I GTSAC 3 cut(s) 434, 769, 875
TspDTI ATGAA 1 cut(s) 385
TspGWI ACGGA 1 cut(s) 1151
TspRI CASTG 2 cut(s) 829, 1218
VspI ATTAAT 1 cut(s) 740
XagI CCTNNNNNAGG 1 cut(s) 964
XapI RAATTY 2 cut(s) 248, 894
XceI RCATGY 1 cut(s) 1052
XspI CTAG 3 cut(s) 452, 1044, 1535
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.