Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0028376

Physical Location & Seq

Genomic Coordinates Reverse (-)

39090287 .. 39093662

Gene Structure 3376 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1341900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2853 bp

ATGGATGCAAGCCTCTCCGCTGCAATCGACTCCTTCGAAGCTTCGATGCGCTCGATGCGCGTTGCGTTCCGTGAAGCTATAGATTATGCTCTGGCACCCATCCGCCGTGAAATTGCTTTACTTCGCCGTGACTTGGTTCTCGGCGTCGAGGGAGATTCTGATCCAGCCTCAATGTGTTCCACGGAAGCTGAATCGATCGAGGCAGGTCATCAGAAACTTCAAAAACTTGAGACGTACGACGGAGACGGTAACCCACTGCGAATTCCGTCGACAATCCAAGACCATTCCATTTTGCCATTGCTCTTATCGTCACCGATGTTGAGAGCATTTGCAAGTTATCCGGTCAAGCCCCAATTGAAAGAGTCTGTGGCAGCCACAATTCCACTGCAACATTTTGAGAAACCCATGCCTGTTGCGACAGTGACCACAGTGCCGTTCCCATTTTCAGCAATCGTTGGCAAAACTGCAGCCTTATCTCAACTAGCAAACCATGATGCCAATGATACCAGCAACATTAAGGGCTATGGAGACCACAAGAGTGTCAAATTACAGATTATTCGCCTCTGCAAGCAGCCGTCAATGAATACAAACACCACCAAATGTAGACATGAGGTATTGAGATCTTTGATTTACAATTTTAAAAATCGGAAGGCCATGTGGCATTGGTTTTTCCATAGTTCCCTTGCGTGTTATACTGATGGCAAGGTGGACATGAATGATGCTTATTTGAATGAGATAAATGGTTGGGTCGGCATGTATGAGGTTGGCAAGTTTGTGATCGTTAGGAATGCAAAGAAAGTGTTTGATGAAATGCCGAAGAGAGAGTGTGAGAATATTATCGATCTACAGGCTGATTTCTCTGTGTTGTTCCCTACTAACCTTGACTTGCGGTCGGTATGGGATCCCGGAGATCCATTGGCTCAAGCTGTAAAACTGATGCTCTATCTTCAGTGCAAGGAGGGCAAGCGCATGGGTAAACAACAGTCATGCTTTTGTTCGAGGCATTGTGGTGGTGACTGGCATCACGCAGCTATGCCATCACTAGTATCTTGGGTTGTAGTTAGGAGGGTTGGGACATGGGAACCACCCCATGCTAATCAGTACAACTTACAGAATGTCAAAAGAGAAAAACACAAGGATAATCTTTTCGAGGTTCAAAGACTTTTGCACTTGACTACTCTTGGCAACTCTAAGTTGCACATTGCCACTTTATGGAAGATGCTCAAGCCTTTTTGGAATGCATCAACCATTACAGACTACATAATGGAAATTGAGTTCTTGTGGGAAAAGGATATCAAAGTTGCTCTGTGGGGAGGCAATACCACTTCCTTAATTTTTTCAGCTTTTGAGTCTTGGCTTGTGGTAGAACACACTAAGGGCATCTTCAAGCAACAGTGGCTTTCATTGACATGTTCTAAGGTTACATTGGAGGCTATTATAGCTAAGGCAGGGTCTCAATGGTATGTCCCATATCAAAAAACTCAATTCTCCATTTTAAAAGCTCCAGGGAAGTCAAGCTCTGTCTCTCCAAGTTACATGGCTCACCAACCTGACATCAACCAGAAAATGAGGGCGATTCTCATTGACTGGCTTATTAAGGTCCATTACAAGTTTGAGCTTATGGATGAGACACAATTCCTTGCCGTACATCTTATAGACAGGTTCTTAGAGCGCCAAACAGTGTTTGGACAGAAGCTTCAATTGGTTGATGTGACAGCCACGCTATTAGCTTGTAAGTATGAGGAGGTTTATGGAGAAATGCTCGACAAGGGAGTCAATCCGAATGAGTTTACCTATGTTTTGTTGAGGGTGAAAAGACTCACGGGGGACATTCCAAGCTATCAGTTTATAATGAAGACGTTGAGTGATGCTGGGAAACTTGATAAGGTGCTTAATGTGGTAGATACAATGCGTGATGATGATGGGGTTGAATTCTTTAACAATCCAATTACGAAGGCTATGTTGTTTCTGAACTTCGCTAGTGAGTCTTCTGATGTTTTCAAATCCACATATCGTGAAGTTGCTGAGAAATATAAGAAAGAAGACATAAGCTTTATCATTGGAAATCTCAAGGTCGTAGTCACTGACGGCATCCAAGAGTACATCAAGTACAGAAAATATATGTGGCTGGAGTTCTATGCTCCTTGGTGTGGACACTGCAAGAAGCTTGTTCTAATTTTGGATGAAGTTGCTGTCTCATATGAAAATGATTCCAATGACGTTATTGCAAAATTACAAGCCACTGCAAATGGTGTGCCAAGTGACTTCGATGTCAAATATTACCAACTGCCTCAATGCCTGCAGGATCAAATGCTTGCACACTTGTGTCTGAAGTTCAGAACAGACTCGGAAGATCTGCAACAACAAGAACCCCTTGATATGGTGTACTTATTTCTTGGGGTTTCAAATGACTTGCTTTTTCAGTGGGTCTCTGCGATGAAAGCTGGAGTTTATGCCTTCTTTGAACATCTTGCTCAGTTTTATAAGATCATTGTTTATTCAGACTACTCATATATGTATGTAGATCATGTAATGGAGAGATTGGACACTAAGCATTGTGTAACACATAAGCTGGGAAACGCTGCCACTATGTATCAGATTGCAGAAGAGATCTATACCACCCAGACTGCCGTATTGGAAACTGCTATGTCTACACTAGTCTTTGTTCAAGGATCTTCGAATTCTGTGTGCAATCGATATCAACTCAGGGCGGTAGTGTATACTGCTGATGAGGGTTTGGAGTCCATAACTGACACAAAGACTGAATTACAGCTGAAGGAGTTAGCTGAGTGTGCCTTTTATGGTACAAATTCTAATCAGCCAGTTCAAATCATGAAAGTGATGGTTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000322 GO:0000323 GO:0000325 GO:0000326 GO:0000327 GO:0003006 GO:0003674 GO:0003756 GO:0003824 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005783 GO:0005788 GO:0005794 GO:0005886 GO:0006457 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0009314 GO:0009416 GO:0009505 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009642 GO:0009644 GO:0009651 GO:0009719 GO:0009725 GO:0009735 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009892 GO:0009960 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010043 GO:0010109 GO:0010154 GO:0010205 GO:0010941 GO:0012505 GO:0016020 GO:0016853 GO:0016860 GO:0016864 GO:0019222 GO:0022414 GO:0030312 GO:0031090 GO:0031323 GO:0031324 GO:0031974 GO:0032501 GO:0032502 GO:0033554 GO:0034975 GO:0034976 GO:0042221 GO:0042548 GO:0043067 GO:0043155 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043467 GO:0044422 GO:0044424 GO:0044432 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0048316 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0061458 GO:0065007 GO:0070013 GO:0071944 GO:0098588 GO:0098805 GO:0140096 GO:1905156

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

Thioredoxin Thioredoxin_6

Protein Analysis

951

Amino Acids

108.49

Weight (kDa)

6.23

Isoelectric Point (pI)

38.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFS_5	PF05631	436 - 476	4.6e-09	Sugar-tranasporters, 12 TM
Cyclin_N	PF00134	505 - 586	2.3e-26	Cyclin, N-terminal domain
Thioredoxin	PF00085	697 - 761	7.2e-09	Thioredoxin
NIF	PF03031	804 - 898	2.5e-07	NLI interacting factor-like phosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0028376)

Species	Orthologous Gene IDs
malus_domestica	MD15G1341900.v1.1
pyrus_communis	pycom09g17560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1850, 2484
AasI	GACNNNNNNGTC	2 cut(s)	1772, 2270
Acc36I	ACCTGC	1 cut(s)	194
AccB1I	GGYRCC	1 cut(s)	94
AccB7I	CCANNNNNTGG	1 cut(s)	1212
AccI	GTMKAC	4 cut(s)	269, 604, 2651, 2720
AccII	CGCG	1 cut(s)	60
AciI	CCGC	4 cut(s)	18, 103, 889, 2711
AclWI	GGATC	6 cut(s)	155, 896, 905, 909, 2313, 2680
AcsI	RAATTY	4 cut(s)	261, 1931, 2680, 2809
AcuI	CTGAAG	3 cut(s)	932, 2351, 2795
AcyI	GRCGYC	1 cut(s)	144
AfaI	GTAC	7 cut(s)	236, 1103, 1647, 2102, 2111, 2387, 2806
AfiI	CCNNNNNNNGG	4 cut(s)	133, 1212, 2150, 2380
AflIII	ACRYGT	1 cut(s)	1409
AhdI	GACNNNNNGTC	1 cut(s)	889
AhlI	ACTAGT	2 cut(s)	1042, 2656
AjnI	CCWGG	1 cut(s)	1504
AjuI	GAANNNNNNNTTGG	2 cut(s)	1685, 1717
AleI	CACNNNNGTG	2 cut(s)	537, 2323
AloI	GAACNNNNNNTCC	2 cut(s)	1259, 1291
Alw26I	GTCTC	8 cut(s)	224, 237, 522, 1458, 1528, 1622, 2200, 2434
AlwI	GGATC	6 cut(s)	155, 896, 905, 909, 2313, 2680
AoxI	GGCC	1 cut(s)	651
ApeKI	GCWGC	6 cut(s)	20, 371, 467, 571, 1028, 2582
ApoI	RAATTY	4 cut(s)	261, 1931, 2680, 2809
AspLEI	GCGC	4 cut(s)	51, 60, 969, 1674
AspS9I	GGNCC	1 cut(s)	1600
AsuC2I	CCSGG	1 cut(s)	906
AsuHPI	GGTGA	4 cut(s)	303, 1025, 1535, 1822
AsuII	TTCGAA	2 cut(s)	36, 2678
AvaII	GGWCC	1 cut(s)	1600
BamHI	GGATCC	1 cut(s)	901
BanI	GGYRCC	1 cut(s)	94
BbsI	GAAGAC	3 cut(s)	1862, 1980, 2049
BbvI	GCAGC	6 cut(s)	7, 383, 479, 583, 1040, 2569
BccI	CCATC	5 cut(s)	107, 692, 1045, 1916, 2836
BceAI	ACGGC	7 cut(s)	90, 111, 418, 559, 1628, 2104, 2615
BciT130I	CCWGG	1 cut(s)	1506
BcnI	CCSGG	1 cut(s)	906
BcoDI	GTCTC	8 cut(s)	224, 237, 522, 1458, 1528, 1622, 2200, 2434
BcuI	ACTAGT	2 cut(s)	1042, 2656
BfaI	CTAG	4 cut(s)	482, 1043, 1980, 2657
BfmI	CTRYAG	4 cut(s)	78, 465, 845, 2300
BfoI	RGCGCY	1 cut(s)	1675
BfuAI	ACCTGC	1 cut(s)	194
BglII	AGATCT	3 cut(s)	620, 2353, 2610
BisI	GCNGC	6 cut(s)	21, 372, 468, 572, 1029, 2583
BlsI	GCNGC	6 cut(s)	22, 373, 469, 573, 1030, 2584
Bme1390I	CCNGG	2 cut(s)	906, 1506
Bme18I	GGWCC	1 cut(s)	1600
BmeRI	GACNNNNNGTC	1 cut(s)	889
BmgT120I	GGNCC	1 cut(s)	1600
BmiI	GGNNCC	3 cut(s)	96, 903, 1083
BmrFI	CCNGG	2 cut(s)	906, 1506
BpiI	GAAGAC	3 cut(s)	1862, 1980, 2049
BplI	GAGNNNNNCTC	2 cut(s)	1746, 1778
BpmI	CTGGAG	3 cut(s)	1488, 2150, 2466
Bpu10I	CCTNAGC	1 cut(s)	1443
Bpu14I	TTCGAA	2 cut(s)	36, 2678
BpuEI	CTTGAG	4 cut(s)	248, 906, 1208, 2054
BpuMI	CCSGG	1 cut(s)	906
Bsa29I	ATCGAT	3 cut(s)	194, 840, 2695
BsaBI	GATNNNNATC	1 cut(s)	159
BsaHI	GRCGYC	1 cut(s)	144
BsaI	GGTCTC	3 cut(s)	522, 1458, 2434
BsaJI	CCNNGG	3 cut(s)	180, 1505, 2144
BsaWI	WCCGGW	1 cut(s)	340
Bsc4I	CCNNNNNNNGG	4 cut(s)	133, 1212, 2150, 2380
Bse1I	ACTGG	3 cut(s)	1022, 1592, 2822
Bse3DI	GCAATG	2 cut(s)	296, 1200
Bse8I	GATNNNNATC	1 cut(s)	159
BseBI	CCWGG	1 cut(s)	1506
BseCI	ATCGAT	3 cut(s)	194, 840, 2695
BseDI	CCNNGG	3 cut(s)	180, 1505, 2144
BseGI	GGATG	5 cut(s)	10, 99, 1630, 2091, 2188
BseJI	GATNNNNATC	1 cut(s)	159
BseLI	CCNNNNNNNGG	4 cut(s)	133, 1212, 2150, 2380
BseMI	GCAATG	2 cut(s)	296, 1200
BseMII	CTCAG	4 cut(s)	2016, 2489, 2719, 2778
BseNI	ACTGG	3 cut(s)	1022, 1592, 2822
BseRI	GAGGAG	1 cut(s)	1757
BseXI	GCAGC	6 cut(s)	7, 383, 479, 583, 1040, 2569
BseYI	CCCAGC	2 cut(s)	1871, 2572
Bsh1236I	CGCG	1 cut(s)	60
Bsh1285I	CGRYCG	2 cut(s)	198, 893
BshFI	GGCC	1 cut(s)	653
BshNI	GGYRCC	1 cut(s)	94
BshVI	ATCGAT	3 cut(s)	194, 840, 2695
BsiEI	CGRYCG	2 cut(s)	198, 893
BsiSI	CCGG	2 cut(s)	341, 906
BsiWI	CGTACG	1 cut(s)	234
BslFI	GGGAC	3 cut(s)	1087, 1451, 1841
BslI	CCNNNNNNNGG	4 cut(s)	133, 1212, 2150, 2380
BsmAI	GTCTC	8 cut(s)	224, 237, 522, 1458, 1528, 1622, 2200, 2434
BsmBI	CGTCTC	2 cut(s)	224, 237
BsmFI	GGGAC	3 cut(s)	1087, 1451, 1841
BsmI	GAATGC	2 cut(s)	793, 1243
BsnI	GGCC	1 cut(s)	653
Bso31I	GGTCTC	3 cut(s)	522, 1458, 2434
Bsp119I	TTCGAA	2 cut(s)	36, 2678
BspACI	CCGC	4 cut(s)	18, 103, 889, 2711
BspANI	GGCC	1 cut(s)	653
BspCNI	CTCAG	4 cut(s)	2017, 2488, 2718, 2779
BspDI	ATCGAT	3 cut(s)	194, 840, 2695
BspFNI	CGCG	1 cut(s)	60
BspHI	TCATGA	1 cut(s)	2832
BspLI	GGNNCC	3 cut(s)	96, 903, 1083
BspMAI	CTGCAG	2 cut(s)	469, 2304
BspMI	ACCTGC	1 cut(s)	194
BspPI	GGATC	6 cut(s)	155, 896, 905, 909, 2313, 2680
BspT104I	TTCGAA	2 cut(s)	36, 2678
BspT107I	GGYRCC	1 cut(s)	94
BspTNI	GGTCTC	3 cut(s)	522, 1458, 2434
BsrDI	GCAATG	2 cut(s)	296, 1200
BsrI	ACTGG	3 cut(s)	1022, 1592, 2822
BssECI	CCNNGG	3 cut(s)	180, 1505, 2144
BssNAI	GTATAC	1 cut(s)	2721
BssNI	GRCGYC	1 cut(s)	144
BssT1I	CCWWGG	1 cut(s)	2144
Bst1107I	GTATAC	1 cut(s)	2721
Bst2UI	CCWGG	1 cut(s)	1506
Bst4CI	ACNGT	6 cut(s)	248, 421, 430, 984, 1395, 1681
Bst6I	CTCTTC	2 cut(s)	812, 2601
BstACI	GRCGYC	1 cut(s)	144
BstBI	TTCGAA	2 cut(s)	36, 2678
BstC8I	GCNNGC	5 cut(s)	10, 569, 965, 2300, 2316
BstDSI	CCRYGG	1 cut(s)	180
BstEII	GGTNACC	1 cut(s)	248
BstF5I	GGATG	5 cut(s)	10, 99, 1630, 2091, 2188
BstFNI	CGCG	1 cut(s)	60
BstH2I	RGCGCY	1 cut(s)	1675
BstHHI	GCGC	4 cut(s)	51, 60, 969, 1674
BstMAI	GTCTC	8 cut(s)	224, 237, 522, 1458, 1528, 1622, 2200, 2434
BstMCI	CGRYCG	2 cut(s)	198, 893
BstMWI	GCNNNNNNNGC	7 cut(s)	55, 57, 960, 1396, 1439, 2441, 2792
BstNI	CCWGG	1 cut(s)	1506
BstNSI	RCATGY	2 cut(s)	757, 1413
BstPI	GGTNACC	1 cut(s)	248
BstSCI	CCNGG	2 cut(s)	904, 1504
BstSFI	CTRYAG	4 cut(s)	78, 465, 845, 2300
BstUI	CGCG	1 cut(s)	60
BstV1I	GCAGC	6 cut(s)	7, 383, 479, 583, 1040, 2569
BstV2I	GAAGAC	3 cut(s)	1862, 1980, 2049
BstX2I	RGATCY	6 cut(s)	620, 901, 910, 2353, 2610, 2672
BstYI	RGATCY	6 cut(s)	620, 901, 910, 2353, 2610, 2672
BstZ17I	GTATAC	1 cut(s)	2721
Bsu15I	ATCGAT	3 cut(s)	194, 840, 2695
BsuRI	GGCC	1 cut(s)	653
BsuTUI	ATCGAT	3 cut(s)	194, 840, 2695
BtgI	CCRYGG	1 cut(s)	180
BtgZI	GCGATG	1 cut(s)	2450
BtsCI	GGATG	5 cut(s)	10, 99, 1630, 2091, 2188
BtsI	GCAGTG	4 cut(s)	254, 383, 2155, 2241
BveI	ACCTGC	1 cut(s)	194
Cac8I	GCNNGC	5 cut(s)	10, 569, 965, 2300, 2316
CciI	TCATGA	1 cut(s)	2832
CfoI	GCGC	4 cut(s)	51, 60, 969, 1674
Cfr13I	GGNCC	1 cut(s)	1600
ClaI	ATCGAT	3 cut(s)	194, 840, 2695
CseI	GACGC	1 cut(s)	133
Csp6I	GTAC	7 cut(s)	235, 1102, 1646, 2101, 2110, 2386, 2805
CviQI	GTAC	7 cut(s)	235, 1102, 1646, 2101, 2110, 2386, 2805
DraI	TTTAAA	2 cut(s)	640, 1497
DrdI	GACNNNNNNGTC	2 cut(s)	1772, 2270
DriI	GACNNNNNGTC	1 cut(s)	889
DseDI	GACNNNNNNGTC	2 cut(s)	1772, 2270
Eam1104I	CTCTTC	2 cut(s)	812, 2601
Eam1105I	GACNNNNNGTC	1 cut(s)	889
EarI	CTCTTC	2 cut(s)	812, 2601
EciI	GGCGGA	1 cut(s)	92
Eco130I	CCWWGG	1 cut(s)	2144
Eco31I	GGTCTC	3 cut(s)	522, 1458, 2434
Eco32I	GATATC	2 cut(s)	1294, 2699
Eco47I	GGWCC	1 cut(s)	1600
Eco57I	CTGAAG	3 cut(s)	932, 2351, 2795
Eco91I	GGTNACC	1 cut(s)	248
EcoO65I	GGTNACC	1 cut(s)	248
EcoRI	GAATTC	3 cut(s)	261, 1931, 2680
EcoRII	CCWGG	1 cut(s)	1504
EcoRV	GATATC	2 cut(s)	1294, 2699
EcoT14I	CCWWGG	1 cut(s)	2144
EcoT22I	ATGCAT	1 cut(s)	1243
ErhI	CCWWGG	1 cut(s)	2144
Esp3I	CGTCTC	2 cut(s)	224, 237
FalI	AAGNNNNNCTT	4 cut(s)	1367, 1399, 2358, 2390
FaqI	GGGAC	3 cut(s)	1087, 1451, 1841
FauNDI	CATATG	1 cut(s)	2200
FblI	GTMKAC	4 cut(s)	269, 604, 2651, 2720
Fnu4HI	GCNGC	6 cut(s)	21, 372, 468, 572, 1029, 2583
FokI	GGATG	5 cut(s)	17, 86, 1637, 2078, 2195
Fsp4HI	GCNGC	6 cut(s)	21, 372, 468, 572, 1029, 2583
FspBI	CTAG	4 cut(s)	482, 1043, 1980, 2657
GlaI	GCGC	4 cut(s)	50, 59, 968, 1673
GluI	GCNGC	6 cut(s)	21, 372, 468, 572, 1029, 2583
GsaI	CCCAGC	2 cut(s)	1875, 2576
GsuI	CTGGAG	3 cut(s)	1488, 2150, 2466
HaeII	RGCGCY	1 cut(s)	1675
HaeIII	GGCC	1 cut(s)	653
HapII	CCGG	2 cut(s)	341, 906
HgaI	GACGC	1 cut(s)	133
HhaI	GCGC	4 cut(s)	51, 60, 969, 1674
Hin1I	GRCGYC	1 cut(s)	144
Hin6I	GCGC	4 cut(s)	49, 58, 967, 1672
HinP1I	GCGC	4 cut(s)	49, 58, 967, 1672
HincII	GTYRAC	1 cut(s)	270
HindII	GTYRAC	1 cut(s)	270
HindIII	AAGCTT	4 cut(s)	39, 1694, 2050, 2165
HpaII	CCGG	2 cut(s)	341, 906
HphI	GGTGA	4 cut(s)	303, 1025, 1535, 1822
Hpy166II	GTNNAC	9 cut(s)	270, 605, 709, 977, 1791, 2153, 2386, 2652, 2721
Hpy188III	TCNNGA	2 cut(s)	2015, 2833
Hpy8I	GTNNAC	9 cut(s)	270, 605, 709, 977, 1791, 2153, 2386, 2652, 2721
Hpy99I	CGWCG	3 cut(s)	149, 242, 271
HpyAV	CCTTC	5 cut(s)	43, 643, 1948, 2467, 2770
HpyCH4III	ACNGT	6 cut(s)	248, 421, 430, 984, 1395, 1681
HpyCH4IV	ACGT	3 cut(s)	233, 1859, 2220
HpyF10VI	GCNNNNNNNGC	7 cut(s)	55, 57, 960, 1396, 1439, 2441, 2792
HpySE526I	ACGT	3 cut(s)	233, 1859, 2220
Hsp92I	GRCGYC	1 cut(s)	144
HspAI	GCGC	4 cut(s)	49, 58, 967, 1672
LmnI	GCTCC	2 cut(s)	1507, 2146
Lsp1109I	GCAGC	6 cut(s)	7, 383, 479, 583, 1040, 2569
MaeI	CTAG	4 cut(s)	482, 1043, 1980, 2657
MaeII	ACGT	3 cut(s)	233, 1859, 2220
MfeI	CAATTG	2 cut(s)	353, 1700
MflI	RGATCY	6 cut(s)	620, 901, 910, 2353, 2610, 2672
MlyI	GAGTC	8 cut(s)	23, 371, 1358, 1782, 1812, 1994, 2339, 2750
Mph1103I	ATGCAT	1 cut(s)	1243
MseI	TTAA	8 cut(s)	516, 639, 1331, 1496, 1596, 1893, 1938, 2851
MslI	CAYNNNNRTG	5 cut(s)	537, 1008, 1408, 2323, 2837
MspA1I	CMGCKG	2 cut(s)	20, 2773
MspI	CCGG	2 cut(s)	341, 906
MspR9I	CCNGG	2 cut(s)	906, 1506
MunI	CAATTG	2 cut(s)	353, 1700
Mva1269I	GAATGC	2 cut(s)	793, 1243
MvaI	CCWGG	1 cut(s)	1506
MvnI	CGCG	1 cut(s)	60
MwoI	GCNNNNNNNGC	7 cut(s)	55, 57, 960, 1396, 1439, 2441, 2792
NciI	CCSGG	1 cut(s)	906
NdeI	CATATG	1 cut(s)	2200
NlaIV	GGNNCC	3 cut(s)	96, 903, 1083
NmeAIII	GCCGAG	1 cut(s)	120
NmuCI	GTSAC	7 cut(s)	128, 309, 421, 1013, 1711, 2080, 2261
NsiI	ATGCAT	1 cut(s)	1243
NspI	RCATGY	2 cut(s)	757, 1413
NspV	TTCGAA	2 cut(s)	36, 2678
OliI	CACNNNNGTG	2 cut(s)	537, 2323
PagI	TCATGA	1 cut(s)	2832
PciI	ACATGT	1 cut(s)	1409
PcsI	WCGNNNNNNNCGW	2 cut(s)	33, 50
PctI	GAATGC	2 cut(s)	793, 1243
PfeI	GAWTC	4 cut(s)	155, 191, 1576, 2210
Pfl23II	CGTACG	1 cut(s)	234
PflMI	CCANNNNNTGG	1 cut(s)	1212
PfoI	TCCNGGA	1 cut(s)	904
PkrI	GCNGC	6 cut(s)	22, 373, 469, 573, 1030, 2584
Ple19I	CGATCG	1 cut(s)	198
PleI	GAGTC	8 cut(s)	23, 370, 1357, 1781, 1812, 1993, 2339, 2749
PpsI	GAGTC	8 cut(s)	23, 370, 1357, 1781, 1812, 1993, 2339, 2749
PscI	ACATGT	1 cut(s)	1409
PsiI	TTATAA	2 cut(s)	1850, 2484
Psp6I	CCWGG	1 cut(s)	1504
PspEI	GGTNACC	1 cut(s)	248
PspFI	CCCAGC	2 cut(s)	1871, 2572
PspGI	CCWGG	1 cut(s)	1504
PspLI	CGTACG	1 cut(s)	234
PspN4I	GGNNCC	3 cut(s)	96, 903, 1083
PspPI	GGNCC	1 cut(s)	1600
PstI	CTGCAG	2 cut(s)	469, 2304
PsuI	RGATCY	6 cut(s)	620, 901, 910, 2353, 2610, 2672
PvuI	CGATCG	1 cut(s)	198
PvuII	CAGCTG	1 cut(s)	2773
RsaI	GTAC	7 cut(s)	236, 1103, 1647, 2102, 2111, 2387, 2806
RsaNI	GTAC	7 cut(s)	235, 1102, 1646, 2101, 2110, 2386, 2805
RseI	CAYNNNNRTG	5 cut(s)	537, 1008, 1408, 2323, 2837
SalI	GTCGAC	1 cut(s)	268
SaqAI	TTAA	8 cut(s)	516, 639, 1331, 1496, 1596, 1893, 1938, 2851
SatI	GCNGC	6 cut(s)	21, 372, 468, 572, 1029, 2583
Sau96I	GGNCC	1 cut(s)	1600
SbfI	CCTGCAGG	1 cut(s)	2304
SchI	GAGTC	8 cut(s)	23, 371, 1358, 1782, 1812, 1994, 2339, 2750
ScrFI	CCNGG	2 cut(s)	906, 1506
SdaI	CCTGCAGG	1 cut(s)	2304
SfcI	CTRYAG	4 cut(s)	78, 465, 845, 2300
SfuI	TTCGAA	2 cut(s)	36, 2678
SinI	GGWCC	1 cut(s)	1600
SmiMI	CAYNNNNRTG	5 cut(s)	537, 1008, 1408, 2323, 2837
SmlI	CTYRAG	4 cut(s)	227, 921, 1223, 2069
SmoI	CTYRAG	4 cut(s)	227, 921, 1223, 2069
SpeI	ACTAGT	2 cut(s)	1042, 2656
Sse8387I	CCTGCAGG	1 cut(s)	2304
SsiI	CCGC	4 cut(s)	18, 103, 889, 2711
SspI	AATATT	2 cut(s)	835, 2279
SspMI	CTAG	4 cut(s)	482, 1043, 1980, 2657
StyD4I	CCNGG	2 cut(s)	904, 1504
StyI	CCWWGG	1 cut(s)	2144
TaaI	ACNGT	6 cut(s)	248, 421, 430, 984, 1395, 1681
TaiI	ACGT	3 cut(s)	236, 1862, 2223
TatI	WGTACW	4 cut(s)	1101, 2100, 2109, 2385
TfiI	GAWTC	4 cut(s)	155, 191, 1576, 2210
Tru1I	TTAA	8 cut(s)	516, 639, 1331, 1496, 1596, 1893, 1938, 2851
Tru9I	TTAA	8 cut(s)	516, 639, 1331, 1496, 1596, 1893, 1938, 2851
TseFI	GTSAC	7 cut(s)	128, 309, 421, 1013, 1711, 2080, 2261
TseI	GCWGC	6 cut(s)	20, 371, 467, 571, 1028, 2582
Tsp45I	GTSAC	7 cut(s)	128, 309, 421, 1013, 1711, 2080, 2261
TspDTI	ATGAA	9 cut(s)	596, 728, 822, 1392, 1868, 2199, 2217, 2453, 2849
TspGWI	ACGGA	4 cut(s)	59, 197, 255, 255
Van91I	CCANNNNNTGG	1 cut(s)	1212
VpaK11BI	GGWCC	1 cut(s)	1600
XapI	RAATTY	4 cut(s)	261, 1931, 2680, 2809
XceI	RCATGY	2 cut(s)	757, 1413
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1682
XmiI	GTMKAC	4 cut(s)	269, 604, 2651, 2720
XspI	CTAG	4 cut(s)	482, 1043, 1980, 2657
Zsp2I	ATGCAT	1 cut(s)	1243

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.